Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 7.3e-267 923.3 461 100.0
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 1.9e-134 483.4 511 56.8
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.2e-133 480.7 509 56.6
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 1.6e-133 480.3 507 56.4
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 3.6e-133 479.2 516 55.6
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 3.6e-133 479.2 516 55.8
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 3.6e-133 479.2 517 55.9
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 3.1e-132 476.1 517 55.7
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 3.1e-132 476.1 521 55.5
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 1.2e-131 474.2 515 54.8
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 1.5e-131 473.8 514 55.4
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 2.6e-131 473.0 513 55.4
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 7.6e-131 471.5 513 54.4
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 7.6e-131 471.5 518 54.8
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 9.9e-131 471.1 516 55.4
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 1.3e-130 470.7 517 55.3
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 2.2e-130 469.9 509 54.6
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 1.1e-129 467.6 508 55.3
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 1.4e-129 467.2 511 55.4
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 2.4e-129 466.5 516 54.3
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 4.1e-129 465.7 521 53.7
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 9.2e-129 464.5 503 56.1
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 1.2e-128 464.2 516 53.9
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 1.6e-128 463.8 541 54.0
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 3.5e-128 462.6 517 54.2
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 4.6e-128 462.2 515 54.6
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 4.6e-128 462.2 504 54.0
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 6.0e-128 461.8 516 53.7
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 7.8e-128 461.5 508 53.3
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 1.3e-127 460.7 508 54.9
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 1.7e-127 460.3 516 53.5
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 3.9e-127 459.1 504 55.2
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 3.9e-127 459.1 514 54.5
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 3.9e-127 459.1 519 53.0
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 6.6e-127 458.4 510 53.5
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 8.6e-127 458.0 503 54.5
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 1.1e-126 457.6 521 53.6
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 3.3e-126 456.1 516 52.9
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 9.6e-126 454.5 520 53.1
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 1.2e-125 454.1 499 54.1
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 2.1e-125 453.4 517 53.8
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 2.8e-125 453.0 517 53.6
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 4.7e-125 452.2 514 53.3
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 4.7e-125 452.2 504 54.0
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 6.2e-125 451.8 501 54.7
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 6.2e-125 451.8 464 56.9
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 8.1e-125 451.4 495 53.9
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.4e-124 450.7 517 51.8
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 4.0e-124 449.1 520 52.7
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 1.5e-123 447.2 508 54.1
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 2.0e-123 446.8 515 52.4
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 2.0e-123 446.8 510 53.5
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 9.9e-123 444.5 508 52.8
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 1.3e-122 444.1 514 51.4
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 1.3e-122 444.1 524 53.6
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 2.9e-122 443.0 510 54.7
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 3.8e-122 442.6 510 53.7
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 4.9e-122 442.2 521 51.6
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 4.9e-122 442.2 502 52.6
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.1e-121 441.0 510 53.7
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.9e-121 440.3 507 53.3
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 4.2e-121 439.1 520 51.5
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 4.2e-121 439.1 515 51.8
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 5.4e-121 438.7 525 51.4
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 5.4e-121 438.7 532 52.1
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 9.3e-121 438.0 529 50.5
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 1.6e-120 437.2 513 53.0
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 1.6e-120 437.2 508 53.3
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 2.7e-120 436.4 499 53.7
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 7.8e-120 434.9 515 51.3
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.0e-119 434.5 506 52.6
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 1.0e-119 434.5 507 51.7
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 1.7e-119 433.7 530 51.7
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 2.3e-119 433.3 511 51.1
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 5.1e-119 432.2 505 51.5
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 6.6e-119 431.8 506 52.6
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 6.6e-119 431.8 506 52.6
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 1.9e-118 430.3 517 52.0
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 3.3e-118 429.5 504 52.0
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 3.3e-118 429.5 506 52.4
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 4.3e-118 429.1 520 50.0
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 7.3e-118 428.3 505 53.1
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 1.6e-117 427.2 511 50.7
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 1.6e-117 427.2 523 50.9
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 2.8e-117 426.4 510 50.4
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 4.8e-117 425.6 474 52.5
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 4.8e-117 425.6 524 51.3
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 6.2e-117 425.2 500 50.6
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 1.4e-116 424.1 515 50.7
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 2.4e-116 423.3 513 50.9
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 5.3e-116 422.2 499 52.1
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 1.2e-115 421.0 498 50.6
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 1.2e-115 421.0 505 51.5
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 1.5e-115 420.6 525 50.5
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 2.6e-115 419.9 496 50.6
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 3.4e-115 419.5 488 52.3
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 4.5e-115 419.1 459 54.5
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 6.4e-114 415.2 489 51.5
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 1.1e-113 414.5 492 51.8
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 2.4e-113 413.3 488 52.3
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 2.4e-113 413.3 513 51.3
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 5.4e-113 412.1 488 52.0
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 7.1e-113 411.8 491 50.3
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 1.3e-111 407.5 471 53.3
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 3.0e-111 406.4 438 54.6
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 1.9e-110 403.7 524 49.2
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 4.3e-110 402.5 540 47.0
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 7.4e-110 401.7 503 49.9
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 1.6e-109 400.6 488 51.8
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 2.1e-109 400.2 501 49.5
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 2.8e-109 399.8 501 49.5
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 3.7e-101 372.9 528 46.2
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.8e-95 354.0 509 45.0
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 2.1e-88 330.5 485 46.0
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 2.4e-84 317.0 293 60.8
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 7.2e-81 305.4 569 38.5
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 1.1e-78 298.1 423 45.4
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 2.8e-69 266.9 469 42.0
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 5.7e-62 242.7 287 50.5
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 1.7e-53 214.5 319 42.3
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 2.8e-40 170.6 276 39.9
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 1.1e-31 142.1 203 48.3
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 1.9e-28 131.3 500 27.2
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 3.5e-27 127.1 239 36.8
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 1.2e-19 102.1 423 27.4
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 1.3e-18 98.6 100 57.0
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.1e-17 95.5 74 66.2
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 2.0e-14 84.7 51 72.5
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 4.6e-11 73.6 80 48.8
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 5.1e-10 70.1 160 33.1
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 2.1e-08 64.7 62 51.6
PRCOL_00002377 Prasinoderma coloniale HOM05D005917 ORTHO05D333437 2.1e-08 64.7 351 25.4


User provided reference genes

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