Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 1.2e-95 353.2 183 100.0
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 6.0e-47 191.4 161 64.0
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 1.7e-46 189.9 194 55.2
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 2.3e-46 189.5 158 63.3
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 3.0e-46 189.1 153 63.4
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 8.7e-46 187.6 174 60.3
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 2.1e-44 183.0 162 61.7
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 2.8e-44 182.6 111 77.5
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.1e-43 180.6 165 59.4
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 3.1e-43 179.1 163 58.9
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 6.9e-43 177.9 148 60.1
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.5e-42 176.8 187 54.0
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 3.4e-42 175.6 193 52.8
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 3.4e-42 175.6 199 55.3
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 7.6e-42 174.5 175 52.0
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 7.6e-42 174.5 100 81.0
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 1.3e-41 173.7 149 60.4
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.7e-41 173.3 160 64.4
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 1.7e-41 173.3 164 57.9
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 4.9e-41 171.8 190 51.6
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 6.4e-41 171.4 167 57.5
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 8.4e-41 171.0 157 57.3
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.1e-40 170.6 118 71.2
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.9e-40 169.9 106 74.5
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.9e-40 169.9 106 74.5
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 1.9e-40 169.9 157 56.7
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 2.4e-40 169.5 155 56.8
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.4e-40 169.5 154 56.5
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.4e-40 169.5 154 56.5
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 2.4e-40 169.5 154 55.2
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 2.4e-40 169.5 172 51.7
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 2.4e-40 169.5 97 80.4
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 3.2e-40 169.1 162 58.6
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.2e-40 168.7 156 57.7
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.1e-40 167.9 156 57.1
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 7.1e-40 167.9 157 56.7
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 7.1e-40 167.9 154 54.5
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 9.3e-40 167.5 180 52.8
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 1.6e-39 166.8 149 60.4
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.1e-39 166.4 105 72.4
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 2.1e-39 166.4 154 59.7
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.1e-39 166.4 154 59.7
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 3.5e-39 165.6 141 58.9
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 3.5e-39 165.6 186 54.8
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 4.6e-39 165.2 98 79.6
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 1.0e-38 164.1 166 53.0
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.7e-38 163.3 141 58.9
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 1.7e-38 163.3 174 55.2
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.7e-38 163.3 156 60.9
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 2.3e-38 162.9 98 78.6
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 8.7e-38 161.0 158 56.3
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.1e-37 160.6 159 56.0
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 1.5e-37 160.2 174 53.4
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.5e-37 160.2 103 70.9
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.5e-37 160.2 103 70.9
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.5e-37 159.5 152 63.8
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.5e-37 159.5 166 54.8
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.5e-37 159.5 148 59.5
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 2.5e-37 159.5 103 70.9
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.3e-36 157.1 166 52.4
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.6e-36 156.8 143 56.6
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 2.1e-36 156.4 178 53.9
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 2.8e-36 156.0 99 72.7
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 3.6e-36 155.6 99 73.7
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 3.6e-36 155.6 162 52.5
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 4.8e-36 155.2 163 52.8
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 4.8e-36 155.2 157 52.9
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 8.1e-36 154.5 157 52.9
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.8e-35 153.3 176 54.5
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 2.4e-35 152.9 157 52.2
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 5.3e-35 151.8 163 53.4
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 1.3e-33 147.1 161 56.5
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 1.7e-33 146.7 212 45.3
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 2.2e-33 146.4 137 59.1
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 2.9e-33 146.0 212 45.8
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 8.4e-33 144.4 154 48.7
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 8.4e-33 144.4 167 50.9
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 3.2e-32 142.5 158 50.6
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 4.2e-32 142.1 174 47.1
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 3.5e-31 139.0 161 53.4
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 3.0e-30 136.0 94 72.3
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 3.9e-30 135.6 169 47.9
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-29 134.0 181 48.1
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-29 134.0 181 48.1
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 3.3e-29 132.5 94 71.3
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 5.6e-29 131.7 96 67.7
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 5.6e-29 131.7 168 47.6
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 9.6e-29 131.0 96 67.7
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 9.6e-29 131.0 96 67.7
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 9.6e-29 131.0 96 66.7
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 1.3e-28 130.6 96 67.7
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.3e-28 130.6 178 44.4
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 2.8e-28 129.4 168 46.4
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 2.8e-28 129.4 96 65.6
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 2.8e-28 129.4 96 65.6
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 2.8e-28 129.4 96 65.6
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 3.7e-28 129.0 168 47.0
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 3.7e-28 129.0 168 47.0
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 3.7e-28 129.0 168 47.0
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-27 127.5 99 65.7
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 1.1e-27 127.5 99 65.7
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 1.1e-27 127.5 99 65.7
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 1.4e-27 127.1 168 45.8
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 3.1e-27 125.9 175 44.0
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 9.0e-27 124.4 92 62.0
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 9.0e-27 124.4 92 62.0
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 2.6e-26 122.9 94 62.8
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 5.8e-26 121.7 159 47.2
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.7e-25 120.2 154 44.2
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.9e-25 118.6 73 69.9
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.6e-23 113.6 152 42.1
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 6.7e-22 108.2 154 45.5
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 8.7e-22 107.8 114 47.4
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.8e-20 102.8 128 45.3
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 3.7e-20 102.4 157 41.4
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.4e-19 100.5 165 40.0
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.6e-15 87.0 58 69.0
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.6e-15 87.0 58 69.0
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 3.5e-15 85.9 89 49.4
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 3.5e-15 85.9 89 49.4
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.0e-14 84.3 67 70.1
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 3.9e-14 82.4 97 46.4
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.1e-11 74.3 42 76.2
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 4.1e-11 72.4 97 40.2
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 9.0e-11 71.2 91 39.6
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 2.9e-09 66.2 52 59.6
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 8.5e-09 64.7 168 31.0
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 1.1e-08 64.3 36 69.4
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 3.2e-08 62.8 105 37.1
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 4.2e-08 62.4 107 35.5
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 7.2e-08 61.6 119 36.1


User provided reference genes

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