Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G251 Amborella trichopoda HOM05D000886 ORTHO05D000525 7.8e-70 266.9 128 100.0
ATR0693G315 Amborella trichopoda HOM05D000886 ORTHO05D000525 2.0e-20 102.8 180 33.3
Prupe.4G179100 Prunus persica HOM05D000886 ORTHO05D000525 7.0e-10 67.8 182 28.6
Zm00001eb340390 Zea mays HOM05D000886 ORTHO05D000525 9.1e-10 67.4 161 29.8
HanXRQChr16g0528461 Helianthus annuus HOM05D000886 ORTHO05D000525 1.2e-09 67.0 168 25.6
Os01g0300000 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 3.5e-09 65.5 170 27.1
Lsat_1_v5_gn_9_55760 Lactuca sativa HOM05D000886 ORTHO05D000525 7.7e-09 64.3 176 26.1
TWI74G0285 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 1.0e-08 63.9 119 31.9
CAN.G723.34 Capsicum annuum HOM05D000886 ORTHO05D000525 1.7e-08 63.2 171 27.5
Oeu060771.1 Olea europaea HOM05D000886 ORTHO05D000525 2.9e-08 62.4 172 24.4
PGSC0003DMG400006389 Solanum tuberosum HOM05D000886 ORTHO05D000525 3.8e-08 62.0 171 26.3
TAR623G1595 Trochodendron aralioides HOM05D000886 ORTHO05D000525 3.8e-08 62.0 177 26.6
TAR623G1664 Trochodendron aralioides HOM05D000886 ORTHO05D000525 5.0e-08 61.6 176 25.0
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 6.5e-08 61.2 173 27.7
CSS0029635 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 8.5e-08 60.8 172 26.7
PSO210G1382 Papaver somniferum HOM05D000886 ORTHO05D000525 1.1e-07 60.5 184 28.3
Lj1g0021355 Lotus japonicus HOM05D000886 ORTHO05D000525 1.5e-07 60.1 168 29.8
TAR374G1684 Trochodendron aralioides HOM05D000886 ORTHO05D000525 1.5e-07 60.1 179 25.7
PSO478G5270 Papaver somniferum HOM05D000886 ORTHO05D000525 1.9e-07 59.7 154 29.2
Rhsim13G0003000 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.9e-07 59.7 173 24.3
Atru.chr1.1368 Acer truncatum HOM05D000886 ORTHO05D000525 3.2e-07 58.9 174 27.0
Cfa016272 Carpinus fangiana HOM05D000886 ORTHO05D000525 3.2e-07 58.9 177 26.6
PGR083G1422 Punica granatum HOM05D000886 ORTHO05D000525 3.2e-07 58.9 172 26.2
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 4.2e-07 58.5 171 25.7
HanXRQChr15g0495481 Helianthus annuus HOM05D000886 ORTHO05D000525 7.2e-07 57.8 175 24.6
Oeu053737.1 Olea europaea HOM05D000886 ORTHO05D000525 7.2e-07 57.8 172 25.0
PSO210G2292 Papaver somniferum HOM05D000886 ORTHO05D000525 7.2e-07 57.8 184 28.3
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 9.4e-07 57.4 168 30.4
CANSAT56G2559 Cannabis sativa HOM05D000886 ORTHO05D000525 9.4e-07 57.4 181 23.8
SHI02776 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-07 57.4 168 28.0
Lj1g0006752 Lotus japonicus HOM05D000886 ORTHO05D000525 1.2e-06 57.0 173 24.9
SEGI_23564 Sequoiadendron giganteum HOM05D000886 ORTHO05D000525 1.2e-06 57.0 167 27.5
TAR365G0209 Trochodendron aralioides HOM05D000886 ORTHO05D000525 1.2e-06 57.0 168 26.2
Ciclev10012747m.g Citrus clementina HOM05D000886 ORTHO05D000525 3.6e-06 55.5 175 28.6
Nitab4.5_0000787g0060 Nicotiana tabacum HOM05D000886 ORTHO05D000525 4.7e-06 55.1 167 25.7
PGR083G1689 Punica granatum HOM05D000886 ORTHO05D000525 8.0e-06 54.3 172 25.0
PGR083G2382 Punica granatum HOM05D000886 ORTHO05D000525 8.0e-06 54.3 172 25.0


User provided reference genes

Program Settings