Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 3.5e-103 378.3 186 100.0
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 8.3e-28 127.9 229 36.2
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.3e-25 120.6 190 38.4
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 7.2e-24 114.8 162 42.6
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 6.1e-23 111.7 183 36.1
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 2.3e-22 109.8 183 36.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 2.0e-21 106.7 161 38.5
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 9.8e-21 104.4 158 40.5
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 2.2e-20 103.2 191 35.1
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 6.3e-20 101.7 163 37.4
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 6.3e-20 101.7 195 34.9
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 6.3e-20 101.7 167 38.3
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 1.4e-19 100.5 200 34.5
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 2.0e-18 96.7 165 38.2
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 3.5e-18 95.9 222 35.1
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 4.5e-18 95.5 190 37.4
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 5.9e-18 95.1 150 40.0
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 7.8e-18 94.7 103 47.6
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 7.8e-18 94.7 132 42.4
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 7.8e-18 94.7 127 40.9
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 1.0e-17 94.4 182 36.8
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 1.0e-17 94.4 154 38.3
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 1.7e-17 93.6 123 43.9
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 2.3e-17 93.2 135 37.0
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 2.9e-17 92.8 195 33.3
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 2.9e-17 92.8 98 50.0
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.1e-16 90.9 171 36.8
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 1.5e-16 90.5 183 33.3
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 1.5e-16 90.5 177 37.3
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 1.9e-16 90.1 195 33.3
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 2.5e-16 89.7 142 37.3
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 4.3e-16 89.0 178 36.5
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 5.6e-16 88.6 121 40.5
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 1.2e-15 87.4 214 33.2
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 1.6e-15 87.0 137 40.1
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.6e-15 87.0 159 35.8
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 2.8e-15 86.3 188 34.0
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 4.7e-15 85.5 131 40.5
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 4.7e-15 85.5 159 35.8
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.7e-15 85.5 159 35.8
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 6.1e-15 85.1 131 40.5
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 6.1e-15 85.1 195 34.9
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 6.1e-15 85.1 191 31.4
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.8e-14 83.6 154 33.1
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 4.0e-14 82.4 80 45.0
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 1.2e-13 80.9 117 39.3
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 2.0e-13 80.1 128 35.9
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 2.6e-13 79.7 195 31.3
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 3.4e-13 79.3 152 37.5
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 9.8e-13 77.8 140 32.1
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.7e-12 77.0 148 34.5
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 1.7e-12 77.0 148 34.5
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 2.9e-12 76.3 125 37.6
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 4.9e-12 75.5 150 35.3
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 6.4e-12 75.1 173 31.2
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 8.3e-12 74.7 185 29.7
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 1.9e-11 73.6 153 31.4
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 9.2e-11 71.2 190 28.4
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 1.2e-10 70.9 176 28.4
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 2.0e-10 70.1 192 29.2
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.0e-10 70.1 178 28.7
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.0e-10 70.1 178 28.7
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.7e-10 69.7 178 26.4
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 4.6e-10 68.9 104 37.5
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 6.0e-10 68.6 184 28.3
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 6.0e-10 68.6 175 27.4
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 6.0e-10 68.6 175 28.6
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 7.8e-10 68.2 176 26.1
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 7.8e-10 68.2 188 26.6
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 1.0e-09 67.8 176 28.4
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 1.0e-09 67.8 186 28.5
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 1.3e-09 67.4 176 30.1
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 1.7e-09 67.0 114 36.0
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 1.7e-09 67.0 184 25.0
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.3e-09 66.6 185 27.6
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 3.0e-09 66.2 193 28.0
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 3.0e-09 66.2 178 29.8
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 5.0e-09 65.5 186 28.0
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 5.0e-09 65.5 163 30.1
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 5.0e-09 65.5 100 37.0
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 8.6e-09 64.7 176 27.3
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.5e-08 63.2 185 27.0
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 2.5e-08 63.2 184 28.3
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 3.3e-08 62.8 179 29.1
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 4.3e-08 62.4 198 26.3
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 5.6e-08 62.0 101 37.6
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 7.3e-08 61.6 192 26.0
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 7.3e-08 61.6 190 23.7
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 7.3e-08 61.6 187 26.7
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 9.5e-08 61.2 47 55.3
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 9.5e-08 61.2 175 30.3
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.6e-07 60.5 176 28.4
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 1.6e-07 60.5 162 28.4
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 2.1e-07 60.1 199 25.6
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 2.1e-07 60.1 170 26.5
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 2.8e-07 59.7 197 25.9
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 3.6e-07 59.3 104 35.6
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 6.2e-07 58.5 186 26.3
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 8.0e-07 58.2 145 31.0
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 1.1e-06 57.8 199 25.1
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 1.1e-06 57.8 104 34.6
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.1e-06 57.8 180 25.0
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.8e-06 57.0 205 27.3
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-06 56.2 54 48.1


User provided reference genes

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