Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 2.0e-142 509.2 288 100.0
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 5.3e-66 255.4 298 55.7
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.1e-63 247.7 291 54.6
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 2.5e-63 246.5 290 55.9
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 3.2e-63 246.1 294 55.4
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 2.7e-62 243.0 293 56.7
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.8e-61 240.4 286 54.9
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 4.4e-60 235.7 292 53.4
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 6.3e-59 231.9 292 53.8
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 3.5e-57 226.1 295 52.5
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 4.5e-57 225.7 297 52.5
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 5.9e-57 225.3 288 53.5
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 7.7e-57 224.9 284 51.8
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 1.0e-56 224.6 290 51.7
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.3e-56 224.2 295 50.2
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.7e-56 223.8 288 52.4
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 8.5e-56 221.5 288 51.0
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 8.5e-56 221.5 291 52.2
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.1e-55 221.1 287 50.9
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.5e-55 220.7 290 51.7
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 2.5e-55 219.9 294 52.4
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.2e-55 219.5 294 51.7
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 3.2e-55 219.5 290 51.4
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.2e-55 219.5 292 49.7
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.5e-55 218.8 289 52.2
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.2e-54 217.6 288 51.7
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 1.6e-54 217.2 298 50.3
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 1.6e-54 217.2 294 51.0
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.7e-54 216.5 294 51.4
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 8.0e-54 214.9 289 52.2
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 8.0e-54 214.9 288 50.7
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.8e-53 213.8 290 51.0
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.8e-53 213.8 294 50.0
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.3e-53 213.4 290 52.8
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 2.6e-52 209.9 293 51.5
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.4e-52 209.1 290 49.3
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 2.2e-51 206.8 284 48.2
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 2.8e-51 206.5 295 50.2
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.8e-51 206.5 285 47.7
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 3.7e-51 206.1 289 49.8
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 3.7e-51 206.1 292 46.6
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.1e-50 204.5 291 48.8
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.4e-50 203.4 287 50.2
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 3.1e-50 203.0 289 48.1
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.1e-50 203.0 287 49.5
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 7.0e-50 201.8 290 47.9
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.6e-49 200.7 293 47.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 2.0e-49 200.3 294 48.0
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.5e-47 193.4 288 49.3
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 9.4e-47 191.4 289 48.1
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.2e-46 191.0 259 50.6
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.6e-46 190.7 293 45.1
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 4.0e-45 186.0 264 50.4
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 5.2e-45 185.7 273 49.1
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 6.8e-45 185.3 290 46.9
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 4.4e-44 182.6 311 45.7
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 6.3e-43 178.7 284 47.5
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.8e-42 177.2 225 53.8
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.8e-42 177.2 288 43.8
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 7.0e-42 175.3 270 48.9
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 2.7e-41 173.3 289 44.6
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 3.5e-41 172.9 285 42.1
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 5.9e-41 172.2 306 44.4
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 7.7e-41 171.8 257 44.4
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.2e-40 170.2 260 47.3
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 6.5e-40 168.7 286 41.3
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 8.5e-40 168.3 257 41.6
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 1.5e-39 167.5 286 40.6
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 1.5e-39 167.5 291 41.2
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 1.5e-39 167.5 284 39.4
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 3.2e-39 166.4 286 39.2
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.6e-38 164.1 286 42.0
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 3.6e-38 162.9 288 42.4
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 4.7e-38 162.5 301 44.9
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 4.7e-38 162.5 301 44.9
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 4.7e-38 162.5 285 38.9
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 4.7e-38 162.5 289 41.5
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 6.1e-38 162.2 250 45.6
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 6.1e-38 162.2 212 55.2
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 1.4e-37 161.0 289 41.2
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 3.0e-37 159.8 268 47.4
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 5.2e-37 159.1 288 41.7
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 6.8e-37 158.7 284 42.3
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 2.8e-35 153.3 256 43.0
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.7e-35 152.9 223 52.0
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 5.4e-34 149.1 258 46.5
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.2e-33 147.9 257 43.2
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 2.9e-32 143.3 257 42.4
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.3e-31 139.8 228 43.4
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 3.6e-30 136.3 291 38.5
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.4e-29 134.4 259 39.0
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 1.4e-29 134.4 242 45.5
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 3.0e-29 133.3 233 37.8
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 5.2e-29 132.5 248 37.1
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 1.7e-27 127.5 204 46.1
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 2.0e-25 120.6 254 39.0
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 3.6e-22 109.8 280 35.0
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 6.2e-22 109.0 77 74.0
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 1.8e-21 107.5 207 38.2
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 5.2e-21 105.9 216 37.5
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.7e-19 99.8 219 38.4
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 8.3e-19 98.6 187 39.0
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 1.9e-18 97.4 304 34.5
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 4.6e-17 92.8 196 36.2
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.1e-14 84.0 284 35.9
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 6.2e-14 82.4 61 72.1
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 3.1e-13 80.1 135 48.1
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 4.0e-13 79.7 319 34.2
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 7.5e-12 75.5 270 30.4
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 1.3e-11 74.7 231 26.8
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.7e-11 74.3 136 44.1
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.1e-09 67.4 80 56.2
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.0e-08 65.1 77 49.4
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.3e-08 64.7 234 30.8
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 2.5e-07 60.5 89 39.3
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 5.6e-07 59.3 277 26.7
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 4.7e-06 56.2 291 25.8


User provided reference genes

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