Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 9.1e-128 460.3 241 100.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.7e-86 323.2 215 75.3
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 3.0e-86 322.4 238 71.4
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.9e-85 319.7 242 70.2
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 9.5e-85 317.4 223 71.7
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.6e-84 316.6 241 68.5
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.6e-84 316.6 241 68.5
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.8e-84 315.8 241 68.9
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 3.6e-84 315.5 216 73.6
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.7e-84 315.1 214 74.3
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 6.2e-84 314.7 241 66.4
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 8.1e-84 314.3 239 66.9
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.4e-83 313.5 250 66.8
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.3e-83 312.8 214 73.8
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 4.0e-83 312.0 216 75.5
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 5.2e-83 311.6 217 72.4
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 6.8e-83 311.2 220 71.8
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 8.9e-83 310.8 216 72.7
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 4.4e-82 308.5 239 66.9
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 7.6e-82 307.8 243 66.3
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 9.9e-82 307.4 214 73.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.9e-81 305.8 221 69.7
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 3.7e-81 305.4 244 67.2
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.9e-81 305.1 217 71.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 6.4e-81 304.7 217 71.4
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 8.4e-81 304.3 215 71.6
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.4e-80 302.8 215 69.8
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 5.4e-80 301.6 216 71.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 7.1e-80 301.2 216 71.3
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 9.2e-80 300.8 208 74.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.7e-79 299.3 241 64.7
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 3.5e-79 298.9 213 69.0
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 4.6e-79 298.5 241 63.5
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 6.0e-79 298.1 238 65.5
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 6.0e-79 298.1 224 69.2
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 7.8e-79 297.7 239 64.4
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.0e-78 297.4 210 71.9
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.3e-78 296.2 232 64.7
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 215 69.8
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 3.0e-78 295.8 239 63.6
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 5.1e-78 295.0 204 74.5
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 8.6e-78 294.3 226 67.3
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 8.6e-78 294.3 224 65.2
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 8.6e-78 294.3 215 67.0
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 8.6e-78 294.3 228 65.4
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 8.6e-78 294.3 232 66.8
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.1e-77 293.9 212 69.3
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.9e-77 293.1 238 64.7
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.9e-77 293.1 241 65.1
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.9e-77 293.1 228 64.9
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 2.5e-77 292.7 228 64.5
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 2.5e-77 292.7 241 63.5
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 231 66.2
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 215 68.8
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.6e-76 290.0 212 68.4
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.6e-76 290.0 233 67.0
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 2.8e-76 289.3 228 64.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 6.2e-76 288.1 208 71.6
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 6.2e-76 288.1 216 67.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 8.1e-76 287.7 241 62.7
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.4e-75 287.0 214 69.2
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.4e-75 287.0 212 67.9
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.8e-75 286.6 217 66.8
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 4.0e-75 285.4 233 61.8
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 6.8e-75 284.6 218 68.3
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 8.9e-75 284.3 214 66.8
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.4e-74 282.3 223 65.9
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 9.9e-74 280.8 214 67.3
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.3e-73 280.4 218 64.2
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.9e-73 278.5 241 59.8
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.9e-73 278.5 217 65.0
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 4.9e-73 278.5 207 66.2
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.9e-72 276.6 215 65.1
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.2e-72 275.8 241 59.8
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.2e-72 275.8 218 63.3
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.2e-72 275.8 218 63.3
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.2e-72 275.8 226 62.8
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 4.2e-72 275.4 215 64.7
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 4.2e-72 275.4 215 64.7
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 4.2e-72 275.4 224 61.6
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 5.4e-72 275.0 226 61.9
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 9.3e-72 274.2 215 64.7
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 9.3e-72 274.2 215 64.2
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.2e-71 273.9 212 65.1
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.6e-71 273.5 216 63.4
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 4.6e-71 271.9 218 63.3
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 6.6e-70 268.1 224 61.6
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.5e-69 266.2 214 64.0
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 7.3e-69 264.6 215 62.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.8e-67 260.0 228 59.2
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 1.8e-67 260.0 195 64.6
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 6.9e-67 258.1 217 60.8
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 3.4e-66 255.8 212 62.7
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 9.9e-66 254.2 213 61.5
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 4.3e-61 238.8 206 59.7
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 3.4e-58 229.2 213 55.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 4.5e-58 228.8 164 68.3
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.2e-56 222.2 146 72.6
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 5.1e-54 215.3 212 57.5
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.5e-53 213.8 227 51.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 8.5e-41 171.4 215 46.5
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 9.3e-40 167.9 156 61.5
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.9e-37 160.2 151 58.3
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.5e-32 143.3 107 64.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.0e-30 137.9 211 40.8
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.0e-30 137.9 99 74.7
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 5.9e-26 122.1 93 66.7
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 8.8e-22 108.2 79 69.6
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.1e-21 107.8 209 34.4
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 4.7e-15 85.9 156 34.6
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 4.1e-11 72.8 51 70.6
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 2.3e-06 57.0 52 53.8


User provided reference genes

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