Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G187 Amborella trichopoda HOM05D000098 ORTHO05D066038 2.8e-54 214.9 103 100.0
ECA234G1660 Erigeron canadensis HOM05D000332 ORTHO05D000268 1.8e-08 62.8 76 47.4
Nitab4.5_0006426g0010 Nicotiana tabacum HOM05D000098 ORTHO05D000523 2.0e-07 59.3 47 51.1
Nitab4.5_0000563g0300 Nicotiana tabacum HOM05D000098 ORTHO05D000523 2.6e-07 58.9 47 53.2
Duzib138G0072 Durio zibethinus HOM05D000098 ORTHO05D000523 5.8e-07 57.8 52 53.8
Sabra01G0057800 Salix brachista HOM05D000098 ORTHO05D000523 5.8e-07 57.8 80 42.5
Carub.0004s1366 Capsella rubella HOM05D000098 ORTHO05D000523 7.6e-07 57.4 65 43.1
Duzib068G0773 Durio zibethinus HOM05D000098 ORTHO05D000523 1.3e-06 56.6 70 41.4
MSTRG.6143 Avicennia marina HOM05D000332 ORTHO05D000268 1.7e-06 56.2 101 36.6
CARHR126130 Cardamine hirsuta HOM05D000098 ORTHO05D000523 1.7e-06 56.2 95 36.8
MD09G1104100 Malus domestica HOM05D000098 ORTHO05D000523 1.7e-06 56.2 65 43.1
A04p24800 Brassica napus HOM05D000098 ORTHO05D000523 2.2e-06 55.8 65 44.6
BraA04t17997Z Brassica rapa HOM05D000098 ORTHO05D000523 2.2e-06 55.8 65 44.6
Cpa.g.sc8.246 Carica papaya HOM05D000098 ORTHO05D000523 2.2e-06 55.8 79 39.2
Gohir.A12G135000 Gossypium hirsutum HOM05D000098 ORTHO05D000523 2.2e-06 55.8 53 45.3
Gohir.D12G138700 Gossypium hirsutum HOM05D000098 ORTHO05D000523 2.2e-06 55.8 53 45.3
Gorai.008G150100 Gossypium raimondii HOM05D000098 ORTHO05D000523 2.2e-06 55.8 53 45.3
HanXRQChr04g0106051 Helianthus annuus HOM05D000098 ORTHO05D000523 2.2e-06 55.8 54 44.4
Nn1g03708 Nelumbo nucifera HOM05D000098 ORTHO05D000523 2.2e-06 55.8 52 51.9
CSS0020605 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000523 2.9e-06 55.5 53 49.1
Sed0017353 Sechium edule HOM05D000098 ORTHO05D000523 2.9e-06 55.5 51 52.9
BcaC02g07939 Brassica carinata HOM05D000098 ORTHO05D000523 3.8e-06 55.1 65 44.6
A03p18120 Brassica napus HOM05D000098 ORTHO05D000523 3.8e-06 55.1 65 44.6
C04p61730 Brassica napus HOM05D000098 ORTHO05D000523 3.8e-06 55.1 65 44.6
BolC4t27656H Brassica oleracea HOM05D000098 ORTHO05D000523 3.8e-06 55.1 65 44.6
BraA03t11071Z Brassica rapa HOM05D000098 ORTHO05D000523 3.8e-06 55.1 65 44.6
THA.LOC104800978 Tarenaya hassleriana HOM05D000098 ORTHO05D000523 4.9e-06 54.7 80 41.2
BcaB01g03987 Brassica carinata HOM05D000098 ORTHO05D000523 6.4e-06 54.3 92 37.0
Peaxi162Scf00437g00321 Petunia axillaris HOM05D000098 ORTHO05D001077 6.4e-06 54.3 73 39.7
QL07p006007 Quercus lobata HOM05D000098 ORTHO05D000523 6.4e-06 54.3 103 34.0
QL08p057218 Quercus lobata HOM05D000098 ORTHO05D000523 6.4e-06 54.3 77 36.4
Sabra03G0108800 Salix brachista HOM05D000098 ORTHO05D000523 6.4e-06 54.3 80 41.2
BcaB06g28587 Brassica carinata HOM05D000098 ORTHO05D000523 8.4e-06 53.9 65 44.6
BcaC01g05911 Brassica carinata HOM05D000098 ORTHO05D000523 8.4e-06 53.9 65 44.6
Potri.001G080700 Populus trichocarpa HOM05D000098 ORTHO05D000523 8.4e-06 53.9 80 41.2
Sc01g0006960 Simmondsia chinensis HOM05D000332 ORTHO05D000268 8.4e-06 53.9 80 43.8


User provided reference genes

Program Settings