Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 9.3e-130 466.8 230 100.0
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 1.8e-72 276.6 174 74.7
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 9.1e-69 264.2 218 59.2
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 1.2e-68 263.8 226 57.1
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.2e-68 263.8 226 57.1
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.7e-68 262.7 182 65.9
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 4.5e-68 261.9 173 68.2
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.0e-67 260.8 191 63.9
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.3e-67 260.4 180 66.1
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.3e-67 260.4 180 66.1
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 2.9e-67 259.2 185 62.7
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 6.6e-67 258.1 192 64.1
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 6.6e-67 258.1 175 67.4
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 8.6e-67 257.7 168 70.2
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 8.6e-67 257.7 192 64.1
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.1e-66 257.3 192 64.1
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 1.5e-66 256.9 164 70.1
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 1.9e-66 256.5 215 59.1
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 5.5e-66 255.0 178 66.3
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 5.5e-66 255.0 225 56.0
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 7.2e-66 254.6 175 67.4
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 7.2e-66 254.6 178 64.0
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 7.2e-66 254.6 175 66.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 9.5e-66 254.2 191 62.3
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 9.5e-66 254.2 172 67.4
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 9.5e-66 254.2 193 63.7
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.8e-65 252.7 205 58.0
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 4.7e-65 251.9 224 55.8
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.4e-64 250.4 163 67.5
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 1.4e-64 250.4 225 54.2
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 2.3e-64 249.6 178 65.7
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 3.0e-64 249.2 203 59.1
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 4.0e-64 248.8 181 65.2
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 2.0e-63 246.5 166 67.5
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 2.6e-63 246.1 180 61.7
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.3e-62 243.8 177 64.4
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 1.7e-62 243.4 221 55.7
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 1.7e-62 243.4 171 62.6
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 2.2e-62 243.0 225 53.8
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 2.2e-62 243.0 213 54.5
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 2.2e-62 243.0 192 59.4
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.8e-62 242.7 217 53.9
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 6.3e-62 241.5 248 50.4
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 6.3e-62 241.5 180 60.0
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 8.3e-62 241.1 204 57.8
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.1e-61 240.7 170 63.5
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.8e-61 240.0 185 60.5
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 2.4e-61 239.6 172 64.5
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 3.1e-61 239.2 172 63.4
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 7.0e-61 238.0 196 57.7
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 1.6e-60 236.9 227 52.4
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 2.0e-60 236.5 223 53.4
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 3.5e-60 235.7 161 62.1
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.0e-59 234.2 207 54.6
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.0e-59 234.2 210 56.2
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.3e-59 233.0 228 51.8
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 3.9e-59 232.3 228 51.3
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 5.0e-59 231.9 172 62.2
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 5.0e-59 231.9 163 63.8
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 6.6e-59 231.5 172 62.2
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.5e-58 230.3 221 55.7
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.9e-58 229.9 210 52.4
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 3.3e-58 229.2 166 60.2
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 5.6e-58 228.4 205 53.2
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 2.1e-57 226.5 210 50.0
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 2.8e-57 226.1 218 52.8
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 2.3e-56 223.0 190 53.7
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 5.2e-56 221.9 179 55.3
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 8.9e-56 221.1 211 51.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 2.0e-55 219.9 179 54.7
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 2.6e-55 219.5 163 58.3
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 2.6e-55 219.5 163 58.3
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 5.8e-55 218.4 175 55.4
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 5.8e-55 218.4 175 55.4
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 5.8e-55 218.4 175 55.4
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 5.8e-55 218.4 175 55.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 7.5e-55 218.0 163 57.7
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 5.4e-53 211.8 171 57.3
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.2e-52 210.7 326 39.3
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.5e-52 209.1 208 49.0
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.3e-51 207.2 174 53.4
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.3e-51 207.2 163 55.2
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 1.3e-51 207.2 163 56.4
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 2.8e-49 199.5 188 50.5
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 1.3e-46 190.7 135 63.7
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.7e-46 190.3 127 65.4
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 5.4e-45 185.3 173 52.6
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.0e-43 181.0 103 74.8
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 6.6e-43 178.3 103 74.8
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 3.2e-37 159.5 106 63.2
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 5.4e-37 158.7 118 60.2
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 7.1e-37 158.3 163 46.6
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 5.1e-35 152.1 155 49.0
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 2.8e-33 146.4 167 49.1
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 8.1e-25 118.2 77 64.9
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 7.6e-23 111.7 120 46.7
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 9.3e-21 104.8 127 40.9
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 2.7e-20 103.2 148 43.2
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 4.6e-20 102.4 91 53.8
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 2.5e-18 96.7 133 39.1
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 6.9e-16 88.6 143 39.2
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 1.1e-13 81.3 115 40.0
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 3.2e-13 79.7 131 37.4
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.8e-11 73.9 41 73.2


User provided reference genes

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