Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 2.7e-247 858.2 427 100.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 5.3e-155 551.6 397 67.8
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 5.2e-150 535.0 388 67.8
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.5e-149 533.5 385 65.7
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 8.2e-148 527.7 375 68.0
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.4e-147 526.2 357 70.6
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.0e-146 523.1 362 68.5
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 5.9e-146 521.5 357 69.2
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 2.9e-145 519.2 386 65.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 3.8e-145 518.8 376 66.5
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 5.0e-145 518.5 393 66.7
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 8.5e-145 517.7 357 70.3
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.9e-144 516.5 396 67.2
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 7.2e-144 514.6 353 69.7
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 7.2e-144 514.6 358 67.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.6e-143 513.5 386 63.5
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 2.1e-143 513.1 371 67.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 2.7e-143 512.7 373 65.1
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 2.7e-143 512.7 373 70.0
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 6.1e-143 511.5 355 67.9
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 6.1e-143 511.5 364 66.8
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.0e-142 510.8 371 67.1
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.3e-142 509.6 384 64.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.3e-142 509.6 378 66.4
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 3.0e-142 509.2 408 61.3
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 4.0e-142 508.8 373 64.1
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 5.2e-142 508.4 367 65.9
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 5.2e-142 508.4 372 65.9
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.2e-141 507.3 357 68.6
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.4e-141 505.4 360 67.5
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 7.5e-141 504.6 381 63.5
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 9.7e-141 504.2 360 66.4
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.3e-140 503.8 358 68.7
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 4.8e-140 501.9 359 66.3
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 4.8e-140 501.9 395 62.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 8.2e-140 501.1 367 64.9
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.4e-139 500.4 358 68.2
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.4e-139 500.4 405 60.7
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.8e-139 500.0 354 69.2
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.4e-139 499.6 375 65.1
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 7.0e-139 498.0 384 64.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 9.1e-139 497.7 357 67.5
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.0e-138 496.5 363 66.1
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.7e-137 493.4 364 64.6
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.8e-137 492.3 357 65.5
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 4.2e-136 488.8 407 59.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.2e-135 487.3 355 67.3
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.7e-135 485.3 380 61.3
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 4.7e-135 485.3 371 64.4
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 6.1e-135 485.0 381 60.6
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 6.1e-135 485.0 380 61.6
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.0e-134 484.2 363 63.9
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 2.3e-134 483.0 340 67.4
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.0e-134 482.6 381 61.4
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.2e-133 480.7 382 61.0
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.2e-133 480.7 491 53.0
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.0e-133 479.9 376 61.2
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 4.4e-133 478.8 381 61.2
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 9.8e-133 477.6 377 60.7
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 9.8e-133 477.6 330 70.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.8e-132 476.1 364 64.3
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 6.3e-132 474.9 377 60.7
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 6.3e-132 474.9 369 62.9
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.4e-131 473.0 351 64.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 5.9e-130 468.4 388 60.8
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.0e-129 467.6 372 61.8
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 5.0e-129 465.3 393 58.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.5e-128 463.0 420 57.9
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.6e-127 460.3 387 59.2
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 8.0e-127 458.0 361 62.3
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.0e-126 457.6 361 60.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 8.9e-126 454.5 374 60.7
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 4.4e-125 452.2 352 64.8
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 8.3e-124 448.0 365 60.5
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.7e-121 440.3 381 59.3
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 3.8e-121 439.1 359 57.1
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.6e-121 438.0 393 58.5
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.3e-120 436.0 339 62.2
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.2e-119 434.1 338 63.6
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.8e-119 433.0 355 61.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.2e-114 417.5 355 60.3
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 7.8e-114 414.8 414 52.9
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.1e-112 411.0 314 64.6
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.2e-111 405.2 342 59.1
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.2e-109 401.0 371 53.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.2e-106 391.0 355 53.8
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 9.9e-101 371.3 429 48.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 9.2e-99 364.8 347 50.4
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 5.1e-97 359.0 394 50.0
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 6.0e-90 335.5 257 62.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 5.1e-89 332.4 258 62.0
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.8e-87 325.9 322 52.8
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.6e-85 320.1 355 50.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 3.0e-81 306.6 293 52.9
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.5e-80 303.5 353 47.9
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.3e-65 253.8 367 40.6
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 7.7e-53 212.2 375 38.4
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 7.4e-40 169.1 120 67.5
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.7e-36 157.9 188 45.7
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.5e-36 156.0 118 61.9
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.5e-32 144.8 178 48.3
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 7.4e-32 142.5 108 62.0
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.0e-26 122.5 168 44.0
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.4e-25 121.7 79 67.1
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 4.4e-24 116.7 111 51.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.0e-20 105.5 378 27.0
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.2e-19 100.5 69 65.2
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.6e-18 98.2 125 43.2
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 2.7e-18 97.4 61 73.8
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.7e-15 88.2 97 44.3
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.4e-14 85.1 122 43.4
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 3.5e-13 80.5 69 55.1
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.3e-12 78.6 223 27.8
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.5e-11 74.3 53 66.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 3.6e-10 70.5 369 24.4
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.0e-09 68.9 292 25.7
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 3.0e-09 67.4 292 25.3
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.7e-07 60.5 41 63.4


User provided reference genes

Program Settings