Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 2.8e-97 358.6 179 100.0
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.4e-35 153.7 190 48.4
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 5.1e-35 151.8 197 44.7
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 3.3e-34 149.1 191 47.6
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 3.3e-34 149.1 193 47.2
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 9.7e-34 147.5 193 46.6
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.2e-33 146.4 197 43.1
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.8e-33 145.2 193 46.6
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 6.3e-33 144.8 193 46.1
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 1.4e-32 143.7 191 44.5
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 7.0e-32 141.4 196 44.9
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.2e-31 140.6 193 45.1
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.6e-31 139.4 201 44.8
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 3.5e-31 139.0 193 46.1
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.3e-30 137.1 204 42.2
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.7e-30 136.7 194 44.3
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.7e-30 136.7 143 50.3
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 8.5e-30 134.4 154 52.6
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 1.5e-29 133.7 201 42.8
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.9e-29 133.3 202 43.6
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.9e-29 133.3 199 44.2
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 4.2e-29 132.1 161 42.2
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 4.2e-29 132.1 193 44.0
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 5.5e-29 131.7 193 44.6
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 7.2e-29 131.3 198 42.4
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.2e-28 130.6 201 41.3
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.2e-28 130.6 193 43.0
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.6e-28 130.2 199 43.2
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 2.1e-28 129.8 200 45.5
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 2.1e-28 129.8 175 45.7
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.1e-28 129.8 197 43.7
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 6.1e-28 128.3 162 46.3
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 8.0e-28 127.9 195 41.5
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 8.0e-28 127.9 206 40.8
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.4e-27 127.1 146 47.9
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.3e-27 126.3 163 45.4
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.3e-27 126.3 205 43.4
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 2.3e-27 126.3 210 42.9
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 2.3e-27 126.3 198 43.4
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 3.0e-27 125.9 152 49.3
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.2e-27 125.2 197 41.1
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 5.2e-27 125.2 209 40.7
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 5.2e-27 125.2 205 40.0
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 6.7e-27 124.8 203 42.9
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 8.8e-27 124.4 215 39.1
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 1.1e-26 124.0 206 39.8
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 1.1e-26 124.0 206 39.8
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.0e-26 123.2 194 43.3
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.6e-26 122.9 167 44.9
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 3.3e-26 122.5 200 42.0
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 3.3e-26 122.5 208 39.4
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 4.4e-26 122.1 193 42.5
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 4.4e-26 122.1 160 43.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 5.7e-26 121.7 187 43.3
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 7.4e-26 121.3 209 39.2
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 9.7e-26 120.9 132 50.8
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.3e-25 120.6 157 43.3
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.3e-25 120.6 149 49.7
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 1.7e-25 120.2 223 36.8
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.2e-25 119.8 207 40.6
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 3.7e-25 119.0 211 39.8
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 4.8e-25 118.6 207 40.1
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 4.8e-25 118.6 151 45.0
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 4.8e-25 118.6 156 47.4
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 6.3e-25 118.2 208 40.9
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 8.2e-25 117.9 144 47.2
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 2.4e-24 116.3 226 37.2
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.4e-24 116.3 204 37.7
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 2.4e-24 116.3 209 41.1
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 3.1e-24 115.9 197 41.1
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.1e-24 115.9 204 37.7
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 7.0e-24 114.8 202 39.1
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 7.0e-24 114.8 212 35.8
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 9.1e-24 114.4 208 38.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 9.1e-24 114.4 208 38.9
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.2e-23 114.0 196 42.3
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.2e-23 114.0 204 37.7
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 3.5e-23 112.5 208 38.0
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 5.9e-23 111.7 196 40.3
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.0e-22 108.6 228 36.0
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 6.5e-22 108.2 197 38.1
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.5e-21 107.1 207 35.7
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 9.4e-21 104.4 192 40.1
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.6e-20 103.6 213 34.7
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.1e-20 103.2 142 45.8
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 3.6e-20 102.4 178 37.6
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 6.1e-20 101.7 202 35.1
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.4e-18 95.9 203 35.0
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 3.4e-18 95.9 217 34.1
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 5.7e-18 95.1 215 33.5
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 9.8e-18 94.4 148 39.9
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.3e-17 94.0 223 32.7
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 3.7e-17 92.4 157 40.1
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.4e-16 90.5 206 35.9
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.4e-16 90.5 248 30.6
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 2.9e-14 82.8 170 32.4
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 6.5e-14 81.6 114 46.5
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.9e-13 80.1 84 50.0
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 1.9e-13 80.1 76 59.2
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.2e-12 77.4 116 44.0
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.2e-09 66.6 87 47.1
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.8e-09 66.2 120 38.3
CBR_g26029 Chara braunii HOM05D030917 ORTHO05D009223 7.0e-08 61.6 113 30.1
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.6e-07 60.5 118 37.3
Pp3c10_970 Physcomitrium patens HOM05D030917 ORTHO05D009223 1.7e-06 57.0 76 36.8


User provided reference genes

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