Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 3.3e-44 181.4 97 100.0
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 3.1e-18 95.1 93 61.3
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 5.3e-18 94.4 99 57.6
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 9.0e-18 93.6 93 63.4
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 1.7e-16 89.4 97 53.6
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 4.9e-16 87.8 100 58.0
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 2.5e-15 85.5 93 59.1
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 2.1e-14 82.4 80 61.2
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 3.5e-14 81.6 99 52.5
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 7.9e-14 80.5 103 54.4
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 7.9e-14 80.5 99 51.5
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 1.0e-13 80.1 78 55.1
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 1.0e-13 80.1 78 55.1
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 3.9e-13 78.2 91 53.8
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 3.9e-13 78.2 88 53.4
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 8.7e-13 77.0 98 50.0
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 8.7e-13 77.0 91 52.7
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 1.1e-12 76.6 105 47.6
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 1.1e-12 76.6 94 53.2
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 3.3e-12 75.1 91 51.6
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 3.3e-12 75.1 96 51.0
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 4.3e-12 74.7 98 50.0
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 5.7e-12 74.3 89 52.8
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 5.7e-12 74.3 90 51.1
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 9.7e-12 73.6 102 49.0
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 9.7e-12 73.6 87 49.4
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 3.7e-11 71.6 93 51.6
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 3.7e-11 71.6 93 51.6
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 4.8e-11 71.2 97 47.4
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 6.3e-11 70.9 80 55.0
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 6.3e-11 70.9 94 50.0
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.4e-10 69.7 80 53.8
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 1.4e-10 69.7 74 54.1
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 1.8e-10 69.3 100 50.0
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 5.3e-10 67.8 79 51.9
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 6.9e-10 67.4 97 47.4
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 1.2e-09 66.6 59 55.9
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 2.6e-09 65.5 98 50.0
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.6e-09 65.5 74 54.1
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.6e-09 65.5 90 47.8
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 2.6e-09 65.5 90 47.8
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 2.6e-09 65.5 98 43.9
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 5.9e-09 64.3 93 44.1
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 7.6e-09 63.9 92 43.5
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 1.0e-08 63.5 99 43.4
Ciclev10027461m.g Citrus clementina HOM05D007574 ORTHO05D007552 1.7e-08 62.8 47 61.7
MBI14_g13884_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 5.0e-08 61.2 68 58.8
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 6.5e-08 60.8 88 46.6
Solyc10g086630.2 Solanum lycopersicum HOM05D007574 ORTHO05D007552 8.5e-08 60.5 95 45.3
Sopen10g036030 Solanum pennellii HOM05D007574 ORTHO05D007552 8.5e-08 60.5 77 46.8
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 1.1e-07 60.1 90 44.4
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.1e-07 60.1 70 48.6
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 1.4e-07 59.7 79 50.6
PSO675G0145 Papaver somniferum HOM05D007574 ORTHO05D007552 4.2e-07 58.2 91 44.0
THA.LOC109116793 Tarenaya hassleriana HOM05D009057 ORTHO05D011698 4.2e-07 58.2 78 46.2
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 5.5e-07 57.8 69 49.3
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 7.2e-07 57.4 94 43.6
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 9.3e-07 57.0 78 43.6
Manes.02G127800 Manihot esculenta HOM05D007574 ORTHO05D007552 9.3e-07 57.0 95 42.1
Nitab4.5_0004598g0040 Nicotiana tabacum HOM05D007574 ORTHO05D007552 9.3e-07 57.0 86 46.5
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.2e-06 56.6 93 43.0
Solyc09g011190.1 Solanum lycopersicum HOM05D007574 ORTHO05D007552 1.2e-06 56.6 76 50.0
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 1.6e-06 56.2 95 46.3
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.6e-06 56.2 97 41.2
PGSC0003DMG400008893 Solanum tuberosum HOM05D007574 ORTHO05D007552 1.6e-06 56.2 76 50.0
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 2.7e-06 55.5 97 41.2
Sopen09g005930 Solanum pennellii HOM05D007574 ORTHO05D007552 2.7e-06 55.5 76 50.0
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 3.6e-06 55.1 94 43.6
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 4.6e-06 54.7 56 51.8
Migut.L01966 Erythranthe guttata HOM05D007574 ORTHO05D007552 6.1e-06 54.3 73 46.6
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 6.1e-06 54.3 94 42.6
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 6.1e-06 54.3 86 43.0
Aqoxy1G00836 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 7.9e-06 53.9 74 44.6


User provided reference genes

Program Settings