Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G583 Amborella trichopoda HOM05D000691 ORTHO05D000378 3.8e-79 298.1 151 100.0
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 5.3e-17 91.7 153 38.6
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 5.3e-17 91.7 153 38.6
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 5.3e-17 91.7 153 38.6
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 1.6e-16 90.1 149 42.3
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-16 89.7 158 38.0
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-16 89.7 153 37.9
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-15 84.7 152 40.1
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-15 84.7 152 40.1
Lj2C116T7 Lonicera japonica HOM05D000691 ORTHO05D000378 1.1e-14 84.0 156 39.1
Lj1C763G4 Lonicera japonica HOM05D000691 ORTHO05D000378 1.9e-14 83.2 148 39.2
Manes.13G002614 Manihot esculenta HOM05D000691 ORTHO05D000378 4.2e-14 82.0 152 38.2
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 1.2e-13 80.5 161 37.9
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-13 80.5 159 36.5
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 3.6e-13 79.0 148 38.5
FvH4_6g17710 Fragaria vesca HOM05D014995 ORTHO05D000378 1.0e-12 77.4 144 37.5
Sopen01g009790 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-12 77.4 161 34.2
Sopen05g015410 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-12 77.4 161 37.9
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-12 77.0 141 39.0
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-12 77.0 157 35.0
FvH4_3g36090 Fragaria vesca HOM05D014995 ORTHO05D035483 1.8e-12 76.6 144 37.5
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 1.8e-12 76.6 161 35.4
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-12 75.9 148 36.5
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-12 75.5 157 35.0
Lj1C1113T3 Lonicera japonica HOM05D000691 ORTHO05D000378 6.7e-12 74.7 75 52.0
Sopen01g010660 Solanum pennellii HOM05D000002 ORTHO05D000378 8.8e-12 74.3 161 36.0
EL10Ac7g16543 Beta vulgaris HOM05D000691 ORTHO05D000378 1.2e-11 73.9 141 38.3
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-11 73.6 145 37.9
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-11 73.6 157 34.4
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-11 72.8 157 33.8
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-11 72.4 154 35.7
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-11 72.0 157 34.4
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 5.7e-11 71.6 141 38.3
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 7.5e-11 71.2 152 35.5
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-10 70.5 156 35.3
EL10Ac9g20847 Beta vulgaris HOM05D000691 ORTHO05D000378 2.8e-10 69.3 160 35.6
Sopen11g014650 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-10 68.9 157 32.5
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-10 68.6 130 36.2
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-10 68.2 153 35.9
Sopen05g023350 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-10 67.8 156 34.0
Sopen06g005960 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-10 67.8 89 48.3
Sopen06g007600 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-10 67.8 150 33.3
ATR0561G097 Amborella trichopoda HOM05D029558 ORTHO05D023431 1.8e-09 66.6 137 35.0
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-09 66.6 151 33.8
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-09 66.6 111 41.4
AUR62031287 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.4e-09 66.2 50 62.0
AUR62042237 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.4e-09 66.2 59 55.9
Lj5P786T11 Lonicera japonica HOM05D000691 ORTHO05D000378 2.4e-09 66.2 66 53.0
Sopen11g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-09 66.2 70 51.4
Sopen04g026810 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-09 65.9 50 64.0
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-09 65.9 73 50.7
AUR62013492 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.1e-09 65.5 130 33.8
FvH4_6g19301 Fragaria vesca HOM05D000691 ORTHO05D000378 4.1e-09 65.5 139 34.5
Manes.17G022547 Manihot esculenta HOM05D000691 ORTHO05D000378 4.1e-09 65.5 163 33.1
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 5.3e-09 65.1 148 32.4
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.3e-09 65.1 138 35.5
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 7.0e-09 64.7 172 29.1
FvH4_6g15222 Fragaria vesca HOM05D000691 ORTHO05D000378 7.0e-09 64.7 172 29.1
FvH4_6g15223 Fragaria vesca HOM05D000691 ORTHO05D000378 7.0e-09 64.7 172 29.1
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 7.0e-09 64.7 151 35.1
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-09 64.3 70 52.9
Sopen08g015530 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-09 64.3 145 34.5
Sopen12g027950 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-09 64.3 161 33.5
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 63.9 146 30.8
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 1.2e-08 63.9 154 30.5
Sopen01g024900 Solanum pennellii HOM05D000691 ORTHO05D000378 1.2e-08 63.9 51 62.7
EL10Ac6g14588 Beta vulgaris HOM05D000691 ORTHO05D000378 1.6e-08 63.5 113 38.1
SEGI_40087 Sequoiadendron giganteum HOM05D000691 ORTHO05D000378 1.6e-08 63.5 136 34.6
Sopen10g016400 Solanum pennellii HOM05D000004 ORTHO05D000378 1.6e-08 63.5 148 34.5
Sopen11g013420 Solanum pennellii HOM05D000691 ORTHO05D000378 1.6e-08 63.5 73 50.7
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 2.0e-08 63.2 182 28.0
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 2.0e-08 63.2 126 33.3
SEGI_22270 Sequoiadendron giganteum HOM05D000691 ORTHO05D000378 2.0e-08 63.2 127 33.1
FvH4_5g31701 Fragaria vesca HOM05D000691 ORTHO05D000378 2.7e-08 62.8 142 32.4
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 2.7e-08 62.8 151 33.1
Sopen08g017070 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-08 62.8 89 44.9
FvH4_1g23713 Fragaria vesca HOM05D000691 ORTHO05D000378 3.5e-08 62.4 151 31.8
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 4.5e-08 62.0 154 29.2
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 4.5e-08 62.0 145 30.3
AUR62035139 Chenopodium quinoa HOM05D000004 ORTHO05D000378 5.9e-08 61.6 157 30.6
Sopen01g010780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-08 61.6 93 38.7
Sopen01g011520 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-08 61.6 89 44.9
Sopen01g013630 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-08 61.6 50 62.0
Sopen08g011580 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-08 61.6 160 32.5
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.7e-08 61.2 139 30.9
Oeu027794.2 Olea europaea HOM05D000691 ORTHO05D000378 7.7e-08 61.2 158 32.3
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 7.7e-08 61.2 162 29.0
FvH4_3g10531 Fragaria vesca HOM05D000691 ORTHO05D000378 1.0e-07 60.8 138 32.6
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 1.0e-07 60.8 138 32.6
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 60.8 74 47.3
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 1.7e-07 60.1 141 29.8
Sopen07g004930 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 60.1 149 28.2
ATR1134G095 Amborella trichopoda HOM05D000691 ORTHO05D000378 2.2e-07 59.7 115 37.4
CiPaw.05G045400 Carya illinoinensis HOM05D000691 ORTHO05D000378 2.2e-07 59.7 153 30.1
FvH4_5g11822 Fragaria vesca HOM05D000691 ORTHO05D000378 2.2e-07 59.7 149 31.5
Sopen05g028610 Solanum pennellii HOM05D000691 ORTHO05D000378 2.2e-07 59.7 145 32.4
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 59.3 54 59.3
CSS0000763 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-07 58.9 142 31.0
FvH4_4g03471 Fragaria vesca HOM05D000691 ORTHO05D000378 3.8e-07 58.9 42 64.3
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 3.8e-07 58.9 151 31.1
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 143 33.6
SHI03493 Sapria himalayana HOM05D000691 ORTHO05D000378 5.0e-07 58.5 69 44.9
Sopen12g008510 Solanum pennellii HOM05D000691 ORTHO05D000378 5.0e-07 58.5 125 32.8
EL10Ac2g03487 Beta vulgaris HOM05D000691 ORTHO05D000378 6.5e-07 58.2 68 47.1
FvH4_2g00261 Fragaria vesca HOM05D000691 ORTHO05D000378 6.5e-07 58.2 136 33.1
FvH4_7g28231 Fragaria vesca HOM05D000004 ORTHO05D000378 6.5e-07 58.2 131 33.6
SpUn0451_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.5e-07 58.2 136 30.9
Sopen02g007390 Solanum pennellii HOM05D000691 ORTHO05D000378 6.5e-07 58.2 141 29.8
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 6.5e-07 58.2 141 29.8
Sopen07g016640 Solanum pennellii HOM05D000004 ORTHO05D000378 6.5e-07 58.2 70 48.6
SEGI_38159 Sequoiadendron giganteum HOM05D000004 ORTHO05D008835 8.5e-07 57.8 151 32.5
Sopen02g003780 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-07 57.8 89 43.8
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 1.1e-06 57.4 143 26.6
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 149 30.2
MELO3C022607.2 Cucumis melo HOM05D000691 ORTHO05D000378 1.5e-06 57.0 139 28.8
Oeu032737.1 Olea europaea HOM05D000691 ORTHO05D000378 1.5e-06 57.0 156 30.8
Sopen05g029300 Solanum pennellii HOM05D000691 ORTHO05D000378 1.5e-06 57.0 162 30.2
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.5e-06 57.0 43 62.8
EL10Ac6g14162 Beta vulgaris HOM05D000691 ORTHO05D000378 1.9e-06 56.6 132 28.8
AUR62042281 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-06 56.6 63 46.0
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-06 56.6 158 30.4
SEGI_28832 Sequoiadendron giganteum HOM05D000691 ORTHO05D000378 1.9e-06 56.6 143 33.6
Sopen11g013830 Solanum pennellii HOM05D000004 ORTHO05D000378 1.9e-06 56.6 70 48.6
Gorai.012G165300 Gossypium raimondii HOM05D000691 ORTHO05D000378 2.5e-06 56.2 141 29.1
Sp1g32920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.5e-06 56.2 132 31.8
Sopen02g007410 Solanum pennellii HOM05D000004 ORTHO05D000378 2.5e-06 56.2 142 30.3
Sopen10g020620 Solanum pennellii HOM05D000691 ORTHO05D000378 2.5e-06 56.2 135 29.6
RcHm_v2.0_Chr2g0137481 Rosa chinensis HOM05D000691 ORTHO05D000378 3.2e-06 55.8 154 27.3
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.2e-06 55.8 167 29.9
Sopen02g008960 Solanum pennellii HOM05D000691 ORTHO05D000378 3.2e-06 55.8 70 42.9
AUR62029958 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.2e-06 55.5 151 25.8
SHI46406 Sapria himalayana HOM05D000691 ORTHO05D000378 4.2e-06 55.5 154 28.6
AUR62022775 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.5e-06 55.1 151 25.8
AUR62029957 Chenopodium quinoa HOM05D008390 ORTHO05D000378 5.5e-06 55.1 151 25.8
AUR62030164 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.5e-06 55.1 158 31.0
Duzib138G1071 Durio zibethinus HOM05D000004 ORTHO05D000378 7.2e-06 54.7 49 49.0
Sopen09g013140 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 54.7 141 29.1
AUR62000692 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.4e-06 54.3 166 30.7
HanXRQChr05g0133501 Helianthus annuus HOM05D000691 ORTHO05D000378 9.4e-06 54.3 148 29.1
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-06 54.3 155 29.0


User provided reference genes

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