Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 0.0e+00 1875.1 1023 100.0
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 1.7e-122 444.9 1094 36.9
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 1.1e-110 405.6 1112 34.2
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 3.1e-108 397.5 1091 34.9
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 3.6e-101 374.0 1043 33.7
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 5.3e-100 370.2 1047 33.9
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 6.0e-96 356.7 998 34.0
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 5.1e-95 353.6 1048 33.4
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.1e-94 352.4 1091 33.9
ATR0661G048 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.9e-94 351.7 235 79.6
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 9.6e-94 349.4 1001 33.9
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 1.3e-93 349.0 1030 32.5
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 2.0e-91 341.7 987 33.7
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 2.0e-91 341.7 1089 32.3
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 1.7e-90 338.6 1065 32.9
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 1.7e-90 338.6 999 32.3
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 1.1e-89 335.9 1085 31.4
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 4.2e-89 334.0 835 36.0
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 2.1e-88 331.6 1086 33.1
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 7.9e-88 329.7 1080 31.5
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 1.8e-87 328.6 1023 33.2
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 3.9e-87 327.4 1006 33.7
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 8.7e-87 326.2 1080 31.9
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 8.7e-87 326.2 1069 33.1
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 1.9e-86 325.1 1041 31.6
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 3.3e-86 324.3 1007 33.1
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 4.3e-86 323.9 1008 31.6
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 5.6e-86 323.6 1015 32.4
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 7.4e-86 323.2 1086 32.1
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 2.1e-85 321.6 1016 32.1
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 2.1e-85 321.6 1085 33.4
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 3.7e-85 320.9 987 31.9
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.1e-84 319.3 1071 32.0
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.8e-84 318.5 1071 31.9
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 4.0e-84 317.4 1062 32.7
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 2.0e-83 315.1 831 34.2
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 2.6e-83 314.7 991 32.9
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.4e-83 314.3 1066 31.7
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 4.5e-83 313.9 1036 33.0
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 5.8e-83 313.5 1046 31.2
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 7.6e-83 313.2 970 32.2
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 1.7e-82 312.0 1072 32.1
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.8e-82 310.8 1059 31.9
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.1e-81 309.3 1072 31.3
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.9e-81 308.5 1075 29.4
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 2.5e-81 308.1 1083 31.9
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.6e-80 305.4 1074 31.8
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 2.7e-80 304.7 1016 31.0
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 4.6e-80 303.9 1059 31.9
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 4.6e-80 303.9 1051 31.0
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 4.6e-80 303.9 1085 30.7
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.0e-79 302.8 1068 31.5
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 2.3e-79 301.6 1018 32.2
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 2.3e-79 301.6 1087 31.6
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 3.9e-79 300.8 679 37.4
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 5.1e-79 300.4 991 31.1
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 5.1e-79 300.4 1061 31.8
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 9.7e-78 296.2 1012 30.6
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 3.7e-77 294.3 1015 32.0
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 2.4e-76 291.6 1061 30.3
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 2.4e-76 291.6 1056 31.8
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 3.1e-76 291.2 1049 31.5
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 5.3e-76 290.4 1002 31.2
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 9.0e-76 289.7 1043 31.4
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 9.0e-76 289.7 1075 32.1
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 2.0e-75 288.5 1060 31.7
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 2.6e-75 288.1 1063 31.6
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 3.4e-75 287.7 1049 30.0
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 4.5e-75 287.3 1051 30.3
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 5.9e-75 287.0 1042 32.0
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 7.7e-75 286.6 1071 32.5
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 1.7e-74 285.4 834 32.9
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 2.2e-74 285.0 811 34.0
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 2.5e-73 281.6 1040 30.7
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 2.7e-72 278.1 1069 31.7
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 6.1e-72 276.9 1107 31.1
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 7.9e-72 276.6 1018 30.3
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 2.3e-71 275.0 739 36.3
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 3.0e-71 274.6 1011 30.7
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 3.9e-71 274.2 1041 30.5
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 3.9e-71 274.2 1060 30.4
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 5.1e-71 273.9 1081 31.4
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 5.1e-71 273.9 740 34.3
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 6.7e-71 273.5 1043 32.2
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 6.7e-71 273.5 615 35.3
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 6.7e-71 273.5 1079 30.2
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.1e-70 272.7 608 36.0
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 2.5e-70 271.6 779 33.1
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 5.7e-70 270.4 1086 29.4
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 9.7e-70 269.6 1049 30.4
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 9.7e-70 269.6 1009 31.5
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 9.7e-70 269.6 991 29.4
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 6.3e-69 266.9 1066 30.8
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 6.3e-69 266.9 669 37.1
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.1e-68 266.2 1051 31.8
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 1.4e-68 265.8 770 33.6
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 3.1e-68 264.6 1018 29.8
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 3.1e-68 264.6 1086 29.2
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 4.1e-68 264.2 1023 30.7
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 4.1e-68 264.2 1047 30.1
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 2.6e-67 261.5 1066 31.1
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 3.4e-67 261.2 1028 31.5
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.4e-67 261.2 1042 28.9
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 1.3e-66 259.2 655 35.0
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 1.7e-66 258.8 722 33.5
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 1.1e-65 256.1 1016 29.6
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 1.4e-65 255.8 1107 29.7
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 2.5e-65 255.0 1016 28.7
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 2.1e-64 251.9 655 35.1
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 2.7e-64 251.5 1115 27.7
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 4.7e-64 250.8 1033 29.5
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 4.7e-64 250.8 1021 29.5
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 3.9e-63 247.7 1059 28.6
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 9.7e-62 243.0 1049 30.0
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 2.2e-61 241.9 951 29.8
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 2.8e-61 241.5 1028 29.3
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 2.8e-61 241.5 951 29.8
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 2.8e-61 241.5 951 29.8
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 1.4e-60 239.2 688 33.9
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 5.3e-60 237.3 660 35.9
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 2.9e-58 231.5 1028 27.6
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 2.9e-58 231.5 1014 28.6
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 3.8e-58 231.1 692 33.5
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 3.8e-58 231.1 692 33.5
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 6.5e-58 230.3 656 34.8
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 3.2e-57 228.0 1062 29.4
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 5.5e-57 227.3 720 33.2
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 3.6e-56 224.6 714 33.2
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 1.0e-55 223.0 1037 28.6
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 1.0e-55 223.0 720 33.2
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 1.8e-55 222.2 1016 27.7
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 5.7e-54 217.2 997 29.3
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 9.7e-54 216.5 653 33.4
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.8e-53 214.9 609 33.0
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 7.7e-51 206.8 883 29.7
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 1.3e-50 206.1 1019 28.4
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 1.6e-48 199.1 492 35.6
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 1.4e-47 196.1 791 29.0
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 1.7e-45 189.1 509 34.6
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 2.8e-45 188.3 496 35.9
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 2.4e-44 185.3 750 30.0
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 1.6e-32 146.0 664 29.4
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 3.4e-30 138.3 650 27.7
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 5.7e-30 137.5 804 29.2
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 2.8e-29 135.2 605 28.6
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 4.1e-28 131.3 272 40.8
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.2e-27 129.8 193 50.3
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 1.2e-27 129.8 599 28.0
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 1.1e-25 123.2 216 40.7
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 8.0e-24 117.1 691 27.5
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 6.8e-23 114.0 218 40.4
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.2e-21 109.0 546 28.0
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 1.2e-19 103.2 251 35.5
Actinidia02823 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.6e-19 102.8 262 34.0
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 4.6e-19 101.3 133 50.4
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 1.3e-18 99.8 399 29.3
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 3.3e-17 95.1 212 34.4
unitig_22.g6727 Utricularia gibba HOM05D003611 ORTHO05D004281 7.3e-17 94.0 502 27.9
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 1.5e-14 86.3 148 44.6
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 1.4e-12 79.7 152 42.1
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 4.1e-12 78.2 210 32.4
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 7.0e-12 77.4 165 40.0
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 2.1e-11 75.9 115 45.2
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 4.6e-11 74.7 203 33.0
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 3.0e-10 72.0 126 42.9
HPP92_002605 Vanilla planifolia HOM05D046274 ORTHO05D004281 6.6e-10 70.9 432 24.5
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 8.6e-10 70.5 156 39.7
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 1.1e-09 70.1 208 37.5
SEGI_21460 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 4.3e-09 68.2 250 30.0
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.2e-08 66.6 115 47.8
SMO137G0129 Selaginella moellendorffii HOM05D024364 ORTHO05D021332 2.8e-08 65.5 111 42.3
MD01G1208800 Malus domestica HOM05D010729 ORTHO05D011897 5.2e-07 61.2 162 34.6
Prupe.2G301400 Prunus persica HOM05D010729 ORTHO05D011897 6.8e-07 60.8 130 40.8
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 8.9e-07 60.5 152 35.5
Dinv32513 Davidia involucrata HOM05D003611 ORTHO05D004281 8.9e-07 60.5 73 49.3
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 5.8e-06 57.8 131 39.7


User provided reference genes

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