Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 0.0e+00 1076.6 564 100.0
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 6.0e-106 389.0 622 41.8
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 2.3e-105 387.1 613 44.2
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 6.3e-95 352.4 572 42.1
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 1.4e-91 341.3 603 41.5
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 2.5e-91 340.5 581 40.8
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 3.2e-91 340.1 630 37.8
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 7.2e-91 339.0 584 39.7
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 1.0e-89 335.1 599 38.9
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 1.0e-89 335.1 592 38.5
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 1.4e-89 334.7 606 38.6
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 5.1e-89 332.8 592 40.2
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 8.8e-89 332.0 618 38.3
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 8.8e-89 332.0 602 40.0
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 2.2e-87 327.4 576 39.1
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 6.3e-87 325.9 623 38.2
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 8.2e-87 325.5 615 37.6
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 3.1e-86 323.6 623 37.6
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 5.3e-86 322.8 621 37.8
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 9.1e-86 322.0 569 40.1
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 9.1e-86 322.0 618 38.3
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 1.2e-85 321.6 653 37.5
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 1.5e-85 321.2 584 39.0
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 1.5e-85 321.2 596 39.8
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 4.5e-85 319.7 596 39.4
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 5.0e-84 316.2 600 38.7
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 6.5e-84 315.8 593 37.3
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 2.5e-83 313.9 588 38.6
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 4.2e-83 313.2 588 38.4
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 3.6e-82 310.1 589 37.2
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 6.1e-82 309.3 605 37.7
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 7.9e-82 308.9 600 37.3
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 1.4e-81 308.1 538 38.8
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 1.8e-81 307.8 614 38.3
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 3.9e-81 306.6 571 38.0
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 8.8e-81 305.4 600 37.5
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 2.0e-80 304.3 594 36.9
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 5.7e-80 302.8 619 36.3
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 5.7e-80 302.8 552 39.1
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 9.7e-80 302.0 602 39.2
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 2.4e-78 297.4 586 37.9
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.1e-78 295.4 607 35.9
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 4.5e-77 293.1 285 52.6
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 4.5e-77 293.1 602 36.2
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 7.7e-77 292.4 608 36.3
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 2.2e-76 290.8 605 37.2
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 3.8e-76 290.0 608 36.2
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 1.1e-75 288.5 566 37.5
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 2.5e-75 287.3 605 35.5
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 5.5e-75 286.2 578 36.3
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 7.2e-75 285.8 559 36.5
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 7.2e-75 285.8 586 35.8
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.2e-74 285.0 568 36.6
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 1.2e-74 285.0 613 35.7
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 2.7e-74 283.9 606 35.5
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 3.6e-74 283.5 570 36.8
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 4.7e-74 283.1 517 38.3
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 8.0e-74 282.3 711 35.3
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 8.0e-74 282.3 566 36.6
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 1.4e-73 281.6 581 36.5
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 2.3e-73 280.8 561 36.9
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 3.0e-73 280.4 587 35.8
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 3.0e-73 280.4 586 35.2
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 5.2e-73 279.6 588 35.7
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 5.2e-73 279.6 554 36.8
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 1.5e-72 278.1 572 36.7
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 1.5e-72 278.1 625 34.1
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 4.4e-72 276.6 570 35.8
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 7.4e-72 275.8 568 35.7
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 1.3e-71 275.0 284 51.4
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 1.7e-71 274.6 620 34.0
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.7e-71 274.6 620 34.0
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 2.2e-71 274.2 565 36.3
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.7e-71 273.5 620 34.0
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 4.8e-71 273.1 571 36.3
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 6.3e-71 272.7 600 34.2
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 8.2e-71 272.3 561 36.7
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 8.2e-71 272.3 562 33.6
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 1.4e-70 271.6 588 35.7
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.1e-70 270.4 620 33.9
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 4.1e-70 270.0 601 35.6
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 1.2e-69 268.5 562 35.4
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 1.2e-69 268.5 574 35.0
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 1.6e-69 268.1 575 37.4
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 2.6e-69 267.3 567 36.3
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 2.6e-69 267.3 567 36.3
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 2.6e-69 267.3 567 36.3
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 7.7e-69 265.8 612 34.5
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 2.1e-66 257.7 661 32.5
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 1.5e-64 251.5 291 47.8
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 2.0e-64 251.1 652 32.4
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 3.4e-64 250.4 295 48.8
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 4.4e-64 250.0 291 47.8
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 9.7e-64 248.8 291 47.1
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 3.7e-63 246.9 562 34.9
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 8.3e-63 245.7 292 46.6
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 1.1e-62 245.4 374 42.0
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 3.5e-61 240.4 301 45.5
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 5.9e-61 239.6 516 35.7
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 5.5e-59 233.0 592 32.9
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 1.6e-58 231.5 564 32.4
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 2.1e-58 231.1 438 37.2
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.4e-57 228.4 620 31.5
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 2.6e-56 224.2 616 32.1
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 7.5e-56 222.6 472 36.0
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 1.4e-54 218.4 385 36.4
ATR0804G093 Amborella trichopoda HOM05D004687 ORTHO05D006002 2.4e-54 217.6 139 84.2
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 3.5e-53 213.8 516 34.3
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 3.5e-53 213.8 615 31.5
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 1.7e-52 211.5 549 30.4
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 2.3e-52 211.1 334 39.8
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 3.8e-52 210.3 524 32.6
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 8.6e-52 209.1 131 89.3
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 9.5e-51 205.7 350 38.6
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 2.2e-47 194.5 231 47.2
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 4.9e-47 193.4 615 32.7
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 1.4e-46 191.8 273 42.9
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.1e-46 190.3 273 42.5
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 2.0e-45 188.0 480 34.2
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 2.0e-45 188.0 278 41.7
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.5e-45 187.2 280 41.8
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 1.0e-44 185.7 413 37.3
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 2.9e-44 184.1 412 35.4
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-43 182.2 281 42.0
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 3.4e-40 170.6 293 39.2
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.2e-38 164.1 515 30.9
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.0e-37 161.4 294 36.7
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 1.2e-29 135.6 293 28.7
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.5e-29 134.0 432 29.9
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 2.5e-27 127.9 291 34.7
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.6e-27 126.7 278 34.2
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 2.3e-25 121.3 78 64.1
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 3.1e-25 120.9 157 40.1
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 2.2e-23 114.8 120 50.8
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 2.9e-23 114.4 132 47.7
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.9e-22 111.7 260 31.5
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 2.4e-22 111.3 125 45.6
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 1.0e-20 105.9 315 27.9
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 8.9e-17 92.8 75 49.3
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 8.4e-15 86.3 358 28.5
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 1.1e-14 85.9 384 27.3
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 2.4e-14 84.7 325 32.9
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.2e-13 82.4 137 35.0
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 3.4e-08 64.3 121 43.0
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.3e-07 62.4 150 35.3
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 2.9e-07 61.2 99 38.4
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 3.8e-07 60.8 166 32.5
BraA03t10099Z Brassica rapa HOM05D004687 ORTHO05D016135 2.4e-06 58.2 52 55.8
A03p47890 Brassica napus HOM05D004687 ORTHO05D016135 4.2e-06 57.4 52 55.8
BraA03t13898Z Brassica rapa HOM05D004687 ORTHO05D016135 4.2e-06 57.4 52 55.8
Aa31LG2G13550 Aethionema arabicum HOM05D012539 ORTHO05D000038 5.4e-06 57.0 59 44.1
C02p16100 Brassica napus HOM05D004224 ORTHO05D016135 5.4e-06 57.0 57 52.6


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