Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G452 Amborella trichopoda HOM05D005963 ORTHO05D006869 2.0e-261 905.2 461 100.0
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 1.0e-95 354.8 514 45.3
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 1.1e-94 351.3 435 49.2
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 1.9e-94 350.5 498 44.6
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 2.4e-92 343.6 496 45.8
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 9.0e-92 341.7 446 47.1
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 9.0e-92 341.7 404 51.5
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 1.5e-91 340.9 413 48.4
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 1.3e-90 337.8 389 51.4
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 1.4e-89 334.3 447 47.4
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 1.9e-89 334.0 447 47.7
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 2.5e-89 333.6 523 42.6
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 5.5e-89 332.4 425 47.5
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 7.2e-89 332.0 451 46.6
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 9.3e-89 331.6 515 42.3
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 3.6e-88 329.7 427 47.1
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 2.5e-86 323.6 448 47.8
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 2.5e-86 323.6 485 45.4
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 3.3e-86 323.2 449 46.5
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 9.7e-86 321.6 448 47.5
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 1.6e-85 320.9 408 47.8
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 6.3e-85 318.9 410 46.3
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 6.3e-85 318.9 457 46.0
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 8.2e-85 318.5 493 43.2
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 1.4e-84 317.8 466 45.1
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 3.1e-84 316.6 413 46.5
Glyma.16G201100 Glycine max HOM05D005963 ORTHO05D006869 6.9e-84 315.5 474 45.6
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 9.1e-84 315.1 484 42.8
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 1.2e-83 314.7 481 43.5
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 3.4e-83 313.2 498 43.0
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 2.2e-82 310.5 354 48.9
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 2.2e-82 310.5 497 42.5
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 3.8e-82 309.7 404 47.5
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.8e-82 309.7 444 45.0
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 8.5e-82 308.5 510 42.2
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.1e-81 308.1 510 42.4
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 1.1e-81 308.1 439 44.6
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 1.4e-81 307.8 326 52.1
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.9e-81 307.4 432 45.1
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 2.5e-81 307.0 491 42.8
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.2e-81 306.6 510 42.2
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 3.2e-81 306.6 365 49.6
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 3.2e-81 306.6 497 41.9
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 5.5e-81 305.8 407 45.2
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 5.5e-81 305.8 372 49.2
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 9.4e-81 305.1 426 43.9
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.2e-80 304.7 486 43.4
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.2e-80 304.7 457 42.2
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 2.1e-80 303.9 386 49.7
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 2.1e-80 303.9 476 43.3
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 4.6e-80 302.8 298 54.7
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 4.6e-80 302.8 386 49.5
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 7.9e-80 302.0 330 54.5
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 1.0e-79 301.6 458 44.5
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 1.8e-79 300.8 359 48.7
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 2.3e-79 300.4 422 45.7
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 5.1e-79 299.3 442 43.2
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 8.8e-79 298.5 471 43.7
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 1.1e-78 298.1 435 45.3
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 3.3e-78 296.6 330 50.0
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 3.3e-78 296.6 428 45.1
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 4.4e-78 296.2 491 42.0
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.1e-76 291.6 333 50.2
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 1.4e-76 291.2 457 43.8
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 2.4e-76 290.4 319 51.7
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 4.5e-75 286.2 512 40.8
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 2.2e-74 283.9 498 42.0
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 8.5e-74 282.0 435 42.3
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 1.4e-73 281.2 397 45.8
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 1.4e-73 281.2 419 43.7
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 1.9e-73 280.8 469 41.6
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 1.0e-71 275.0 512 38.9
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 1.0e-71 275.0 507 39.3
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 1.4e-71 274.6 431 41.8
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 5.2e-71 272.7 468 40.8
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 2.0e-70 270.8 502 38.6
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 2.0e-70 270.8 502 38.6
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 4.4e-70 269.6 502 39.0
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 4.4e-70 269.6 502 39.0
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 4.4e-70 269.6 502 39.0
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 1.3e-69 268.1 516 39.0
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 2.2e-69 267.3 506 38.5
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 6.3e-69 265.8 489 39.9
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 6.3e-69 265.8 489 39.9
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 5.3e-68 262.7 500 40.0
Atru.chr1.581 Acer truncatum HOM05D005963 ORTHO05D006869 7.0e-68 262.3 357 47.1
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 4.5e-67 259.6 502 39.4
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 1.0e-66 258.5 333 44.7
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.7e-66 257.7 424 42.5
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.2e-65 253.4 322 46.3
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 5.5e-65 252.7 516 37.0
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 8.8e-63 245.4 420 38.6
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 1.2e-62 245.0 486 38.7
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 2.6e-62 243.8 486 38.5
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 3.3e-62 243.4 485 37.7
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 9.7e-62 241.9 359 44.0
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 3.5e-59 233.4 388 41.5
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 1.3e-50 204.9 320 41.9
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 8.6e-50 202.2 322 39.1
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 3.4e-46 190.3 307 37.8
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 7.0e-44 182.6 252 44.8
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 3.3e-41 173.7 494 33.0
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.6e-38 164.1 164 54.9
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.6e-38 164.1 164 54.9
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 5.6e-25 119.8 101 54.5
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.4e-23 115.2 118 48.3
CDE08G0941 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 5.6e-17 93.2 104 53.8
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 4.0e-15 87.0 86 48.8
MBI05_g12588_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 2.2e-13 81.3 56 66.1
ATR0680G425 Amborella trichopoda HOM05D005963 ORTHO05D006869 4.9e-13 80.1 41 90.2
CBR_g38396 Chara braunii HOM05D002537 ORTHO05D002751 5.6e-09 66.6 116 31.9
CBR_g29752 Chara braunii HOM05D000601 ORTHO05D000407 9.6e-09 65.9 140 34.3
CBR_g78824 Chara braunii HOM05D000601 ORTHO05D000407 1.2e-08 65.5 140 33.6
Mapoly0086s0081 Marchantia polymorpha HOM05D003725 ORTHO05D004294 1.6e-08 65.1 175 29.7
CBR_g52699 Chara braunii HOM05D000601 ORTHO05D000407 2.1e-08 64.7 168 31.5
CBR_g70975 Chara braunii HOM05D000601 ORTHO05D000407 2.1e-08 64.7 140 33.6
ATR0721G007 Amborella trichopoda HOM05D005963 ORTHO05D006869 2.8e-08 64.3 52 69.2
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 2.8e-08 64.3 46 60.9
CBR_g26191 Chara braunii HOM05D000601 ORTHO05D000407 1.1e-07 62.4 140 32.9
Pp3c15_4190 Physcomitrium patens HOM05D002537 ORTHO05D002751 1.1e-07 62.4 169 27.2
CBR_g31715 Chara braunii HOM05D000601 ORTHO05D000407 1.4e-07 62.0 140 33.6
AagrBONN_evm.TU.Sc2ySwM_117.2839 Anthoceros agrestis HOM05D002537 ORTHO05D006869 1.8e-07 61.6 121 28.9
CBR_g24159 Chara braunii HOM05D000601 ORTHO05D000407 1.8e-07 61.6 140 32.9
CBR_g36301 Chara braunii HOM05D000601 ORTHO05D000407 1.8e-07 61.6 140 33.6
CBR_g51218 Chara braunii HOM05D000601 ORTHO05D000407 2.4e-07 61.2 140 34.3
CBR_g12342 Chara braunii HOM05D000601 ORTHO05D000407 3.1e-07 60.8 140 33.6
CBR_g53702 Chara braunii HOM05D000601 ORTHO05D000407 3.1e-07 60.8 140 33.6
SMO351G0173 Selaginella moellendorffii HOM05D002537 ORTHO05D002751 3.1e-07 60.8 101 37.6
CBR_g56897 Chara braunii HOM05D000601 ORTHO05D000407 4.0e-07 60.5 158 32.9
Mapoly0065s0047 Marchantia polymorpha HOM05D003725 ORTHO05D004294 5.2e-07 60.1 116 30.2
CBR_g51222 Chara braunii HOM05D000601 ORTHO05D000407 6.9e-07 59.7 140 32.9
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 1.2e-06 58.9 138 30.4
CBR_g48765 Chara braunii HOM05D000601 ORTHO05D000407 1.2e-06 58.9 140 32.1
CBR_g49544 Chara braunii HOM05D000601 ORTHO05D000407 2.6e-06 57.8 138 31.2
CBR_g51043 Chara braunii HOM05D000601 ORTHO05D000407 2.6e-06 57.8 138 30.4
Solyc02g030460.2 Solanum lycopersicum HOM05D003725 ORTHO05D004294 2.6e-06 57.8 122 31.1
Sopen02g009780 Solanum pennellii HOM05D003725 ORTHO05D004294 3.4e-06 57.4 122 30.3
CBR_g50680 Chara braunii HOM05D000601 ORTHO05D000407 4.4e-06 57.0 115 33.9
CBR_g55868 Chara braunii HOM05D000601 ORTHO05D000407 4.4e-06 57.0 140 32.1
CBR_g16125 Chara braunii HOM05D000601 ORTHO05D000407 5.8e-06 56.6 144 31.2
CBR_g78844 Chara braunii HOM05D000601 ORTHO05D000407 5.8e-06 56.6 138 32.6
PGSC0003DMG400012915 Solanum tuberosum HOM05D003725 ORTHO05D004294 5.8e-06 56.6 118 28.8
ATR0749G011 Amborella trichopoda HOM05D005963 ORTHO05D006869 7.6e-06 56.2 29 86.2
CBR_g40879 Chara braunii HOM05D000601 ORTHO05D000407 7.6e-06 56.2 99 38.4
CBR_g6647 Chara braunii HOM05D000601 ORTHO05D000407 7.6e-06 56.2 138 29.7
CBR_g23527 Chara braunii HOM05D000601 ORTHO05D000407 9.9e-06 55.8 138 31.9


User provided reference genes

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