Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 8.5e-106 387.1 209 100.0
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.5e-73 280.0 186 86.6
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 1.9e-28 130.2 198 41.9
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.2e-27 127.5 191 39.8
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 6.0e-27 125.2 183 41.5
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 3.3e-25 119.4 189 39.2
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 9.6e-25 117.9 199 39.7
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 9.6e-25 117.9 177 44.6
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 1.6e-24 117.1 182 39.0
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 2.8e-24 116.3 189 38.1
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 2.8e-24 116.3 193 38.9
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 3.7e-24 115.9 202 40.1
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 8.1e-24 114.8 183 39.3
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 8.1e-24 114.8 197 40.6
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 8.1e-24 114.8 197 39.1
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 1.1e-23 114.4 183 38.8
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.1e-23 114.4 178 41.6
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 1.4e-23 114.0 183 40.4
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 1.8e-23 113.6 182 40.1
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 2.4e-23 113.2 205 38.5
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 3.1e-23 112.8 194 37.6
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 4.0e-23 112.5 179 41.9
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 4.0e-23 112.5 177 41.8
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 5.3e-23 112.1 187 40.1
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 6.9e-23 111.7 197 38.6
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 6.9e-23 111.7 179 41.9
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 9.0e-23 111.3 182 41.2
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.5e-22 110.5 200 39.0
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 1.5e-22 110.5 211 37.4
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 1.5e-22 110.5 190 37.4
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 1.5e-22 110.5 208 36.5
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 2.6e-22 109.8 177 38.4
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 5.8e-22 108.6 174 41.4
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 5.8e-22 108.6 178 42.1
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 7.6e-22 108.2 183 37.7
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 7.6e-22 108.2 176 43.2
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 7.6e-22 108.2 184 38.6
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 1.0e-21 107.8 189 37.0
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.3e-21 107.5 177 38.4
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 2.2e-21 106.7 184 38.6
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 2.2e-21 106.7 176 40.9
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 2.9e-21 106.3 181 39.2
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 2.9e-21 106.3 177 38.4
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 4.9e-21 105.5 197 36.5
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 4.9e-21 105.5 183 36.1
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 6.5e-21 105.1 179 39.1
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 6.5e-21 105.1 182 37.9
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 6.5e-21 105.1 197 37.6
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 6.5e-21 105.1 176 40.3
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 6.5e-21 105.1 180 40.6
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 1.4e-20 104.0 182 39.0
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.4e-20 104.0 179 38.5
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.4e-20 104.0 175 40.6
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 1.4e-20 104.0 202 37.6
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.9e-20 103.6 178 39.9
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 1.9e-20 103.6 180 38.3
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.5e-20 103.2 197 36.5
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 2.5e-20 103.2 197 36.5
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 3.2e-20 102.8 194 36.1
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 4.2e-20 102.4 181 40.3
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 7.1e-20 101.7 172 39.0
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 9.3e-20 101.3 178 39.9
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 1.2e-19 100.9 184 38.0
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 1.2e-19 100.9 184 38.0
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 1.2e-19 100.9 184 38.0
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 1.2e-19 100.9 184 38.0
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 1.2e-19 100.9 186 41.4
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 1.2e-19 100.9 221 34.8
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 2.1e-19 100.1 196 36.2
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 2.7e-19 99.8 185 38.9
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 4.6e-19 99.0 190 40.0
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 6.0e-19 98.6 193 36.8
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 6.0e-19 98.6 197 36.0
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 6.0e-19 98.6 196 36.7
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 7.9e-19 98.2 181 37.6
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 7.9e-19 98.2 174 37.9
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 7.9e-19 98.2 174 38.5
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 1.0e-18 97.8 109 47.7
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 1.0e-18 97.8 176 38.1
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.0e-18 97.8 176 38.1
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 2.3e-18 96.7 135 45.2
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 2.3e-18 96.7 194 37.1
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 3.9e-18 95.9 176 36.9
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 3.9e-18 95.9 172 37.2
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 5.1e-18 95.5 180 38.3
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 1.9e-17 93.6 222 33.8
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 4.3e-17 92.4 126 46.0
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 5.7e-17 92.0 190 34.2
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 5.7e-17 92.0 202 39.6
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 5.7e-17 92.0 183 36.1
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 7.4e-17 91.7 177 37.9
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.6e-16 90.5 198 37.9
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 2.8e-16 89.7 176 36.4
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 2.8e-16 89.7 135 40.0
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 4.8e-16 89.0 177 37.3
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 6.2e-16 88.6 210 33.3
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 2.4e-15 86.7 93 50.5
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 6.9e-15 85.1 94 48.9
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 6.9e-15 85.1 94 48.9
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 9.0e-15 84.7 95 47.4
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 1.2e-14 84.3 94 48.9
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 1.5e-14 84.0 94 48.9
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 1.5e-14 84.0 94 48.9
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 1.5e-14 84.0 94 48.9
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.5e-14 84.0 94 48.9
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 1.5e-14 84.0 94 48.9
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.5e-14 84.0 94 48.9
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 2.0e-14 83.6 93 45.2
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 5.8e-14 82.0 202 32.7
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 1.3e-13 80.9 94 47.9
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 1.3e-13 80.9 91 48.4
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 1.7e-13 80.5 185 33.0
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 5.0e-13 79.0 188 31.9
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 5.0e-13 79.0 188 31.9
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 2.5e-12 76.6 183 32.2
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.2e-12 76.3 174 34.5
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 4.2e-12 75.9 178 33.1
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 4.2e-12 75.9 96 41.7
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 1.8e-10 70.5 105 41.9
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 8.7e-10 68.2 199 30.2
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 7.4e-09 65.1 177 32.2
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 7.4e-09 65.1 209 28.7
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 6.3e-08 62.0 191 29.8
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 5.3e-07 58.9 130 32.3
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 6.9e-07 58.5 135 31.9


User provided reference genes

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