Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G406 Amborella trichopoda HOM05D004345 ORTHO05D005192 9.2e-144 513.5 244 100.0
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 9.2e-120 433.7 223 93.3
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 9.9e-114 413.7 223 91.5
ATR0022G053 Amborella trichopoda HOM05D004345 ORTHO05D005192 5.7e-85 318.2 223 74.9
ATR1192G002 Amborella trichopoda HOM05D004345 ORTHO05D005192 6.1e-71 271.6 147 91.2
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 4.9e-20 102.4 209 33.0
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 9.2e-19 98.2 248 30.2
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 9.2e-19 98.2 248 30.2
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 1.7e-17 94.0 224 31.2
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 2.3e-17 93.6 220 31.4
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 4.3e-16 89.4 233 31.3
HPP92_000827 Vanilla planifolia HOM05D004345 ORTHO05D005192 1.6e-15 87.4 219 31.1
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 2.8e-15 86.7 210 30.5
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 3.4e-13 79.7 205 31.2
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 3.4e-13 79.7 232 29.3
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 7.5e-13 78.6 230 29.1
Aqoxy7G01729 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 9.9e-13 78.2 236 27.1
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.3e-12 77.8 229 29.3
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 1.3e-12 77.8 248 27.0
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 4.9e-12 75.9 218 27.1
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 4.9e-12 75.9 210 32.4
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 4.9e-12 75.9 236 28.8
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 6.4e-12 75.5 209 29.2
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 6.4e-12 75.5 208 30.3
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 6.4e-12 75.5 233 28.3
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 8.3e-12 75.1 211 31.3
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.4e-11 74.3 234 25.6
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 7.1e-11 72.0 215 30.7
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 7.1e-11 72.0 215 30.2
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 9.2e-11 71.6 207 27.1
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.2e-10 71.2 209 33.0
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 1.6e-10 70.9 212 28.8
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 1.6e-10 70.9 233 28.3
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 1.6e-10 70.9 231 26.4
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 2.1e-10 70.5 209 33.0
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.1e-10 70.5 209 33.0
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 2.1e-10 70.5 206 32.5
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 4.6e-10 69.3 219 28.3
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 6.0e-10 68.9 254 26.4
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 7.8e-10 68.6 209 32.1
Pp3c14_24820 Physcomitrium patens HOM05D004345 ORTHO05D005192 7.8e-10 68.6 156 30.8
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 7.8e-10 68.6 223 29.1
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 1.0e-09 68.2 221 27.1
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 1.3e-09 67.8 230 26.1
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 1.3e-09 67.8 206 31.1
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.7e-09 67.4 246 28.9
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 5.1e-09 65.9 214 29.9
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 8.6e-09 65.1 214 29.0
TAR383G0351 Trochodendron aralioides HOM05D004345 ORTHO05D005192 1.5e-08 64.3 124 29.8
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 1.9e-08 63.9 228 28.5
Os03g0240400 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 1.9e-08 63.9 213 29.6
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 1.9e-08 63.9 238 25.6
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 1.6e-07 60.8 249 25.7
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 2.8e-07 60.1 236 27.5
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 2.8e-07 60.1 124 33.9
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 2.8e-07 60.1 225 27.6
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 1.1e-06 58.2 168 33.9
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.8e-06 57.4 229 25.8
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 1.8e-06 57.4 115 31.3


User provided reference genes

Program Settings