Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 2.1e-89 332.4 173 100.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.7e-43 179.9 145 67.6
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.2e-43 179.5 152 64.5
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.9e-42 176.4 148 68.2
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.2e-42 175.6 150 65.3
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 3.2e-42 175.6 149 64.4
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.6e-41 173.3 153 62.1
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 2.7e-41 172.6 148 65.5
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.6e-41 171.8 153 61.4
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 6.1e-41 171.4 148 66.2
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 7.9e-41 171.0 150 63.3
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.0e-40 170.6 161 59.0
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.0e-40 170.6 151 62.3
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 6.7e-40 167.9 161 59.0
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.1e-39 167.2 151 62.9
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-39 166.8 143 65.0
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 2.5e-39 166.0 153 60.8
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 3.3e-39 165.6 148 65.5
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 5.7e-39 164.9 113 75.2
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 7.4e-39 164.5 145 66.2
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 7.4e-39 164.5 151 62.9
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.3e-38 163.7 151 61.6
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.2e-38 162.9 146 63.7
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.8e-38 162.5 145 60.0
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.8e-38 162.5 141 63.1
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 3.7e-38 162.2 147 61.2
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 4.8e-38 161.8 145 63.4
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 6.3e-38 161.4 148 59.5
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 6.3e-38 161.4 145 62.8
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 6.3e-38 161.4 149 62.4
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 6.3e-38 161.4 149 62.4
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 6.3e-38 161.4 149 62.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 8.2e-38 161.0 150 59.3
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.1e-37 160.6 101 80.2
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.1e-37 160.6 164 57.3
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.4e-37 160.2 149 59.1
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.4e-37 160.2 157 58.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.8e-37 159.8 150 59.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.8e-37 159.8 150 59.3
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 5.3e-37 158.3 148 60.8
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 6.9e-37 157.9 149 61.1
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 6.9e-37 157.9 162 56.8
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.2e-36 157.1 155 56.1
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 1.5e-36 156.8 148 58.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.0e-36 156.4 150 58.7
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 2.0e-36 156.4 148 62.8
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.6e-36 156.0 148 59.5
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 2.6e-36 156.0 147 58.5
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 4.5e-36 155.2 146 58.2
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 7.7e-36 154.5 115 67.8
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 7.7e-36 154.5 130 63.1
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.7e-36 154.5 111 71.2
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.0e-35 154.1 101 74.3
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.3e-35 153.7 144 64.6
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 2.9e-35 152.5 104 70.2
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 2.9e-35 152.5 133 61.7
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 3.8e-35 152.1 129 63.6
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 5.0e-35 151.8 144 59.7
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 5.0e-35 151.8 101 73.3
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 6.5e-35 151.4 142 59.2
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.5e-35 151.4 142 59.2
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.5e-35 151.0 130 62.3
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.1e-34 150.6 150 58.7
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 1.1e-34 150.6 99 75.8
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.1e-34 150.6 133 60.9
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.4e-34 150.2 153 57.5
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-34 150.2 143 59.4
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.4e-34 150.2 142 59.9
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.9e-34 149.8 101 73.3
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.9e-34 149.8 151 56.3
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 3.2e-34 149.1 150 60.7
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.2e-34 149.1 158 57.6
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 3.2e-34 149.1 101 72.3
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 4.2e-34 148.7 151 57.0
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 4.2e-34 148.7 139 59.7
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 5.5e-34 148.3 190 49.5
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 7.2e-34 147.9 112 67.0
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.2e-33 147.1 150 56.7
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.2e-33 147.1 150 56.7
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.2e-33 147.1 130 60.8
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.2e-33 147.1 145 56.6
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.1e-33 146.4 150 58.0
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 3.6e-33 145.6 152 55.3
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 6.1e-33 144.8 152 56.6
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 7.9e-33 144.4 152 55.3
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.9e-32 142.1 102 71.6
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 3.9e-32 142.1 108 66.7
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.1e-32 141.7 150 56.0
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 5.1e-32 141.7 108 68.5
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 6.7e-32 141.4 102 71.6
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.6e-31 139.4 105 67.6
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.6e-31 139.4 121 63.6
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 3.3e-31 139.0 149 52.3
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 7.4e-31 137.9 101 69.3
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 3.1e-29 132.5 101 67.3
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 5.9e-28 128.3 96 67.7
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 5.9e-28 128.3 96 67.7
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 5.9e-28 128.3 100 65.0
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 7.7e-28 127.9 97 66.0
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 7.7e-28 127.9 97 66.0
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 7.7e-28 127.9 97 66.0
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 2.2e-27 126.3 97 67.0
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.3e-23 112.5 93 66.7
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 9.7e-23 110.9 121 50.4
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.5e-18 96.3 108 50.9
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 2.1e-17 93.2 54 81.5
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 8.0e-17 91.3 111 43.2
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 8.0e-17 91.3 138 38.4
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.4e-16 90.5 101 45.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 4.8e-14 82.0 94 50.0
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.3e-14 81.6 53 69.8
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.3e-14 81.6 53 69.8
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.3e-14 81.6 95 49.5
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-13 80.1 54 66.7
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 2.4e-13 79.7 59 71.2
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.1e-13 79.0 93 49.5
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.2e-12 77.4 53 73.6
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 2.0e-12 76.6 117 47.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 5.9e-12 75.1 50 72.0
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 1.1e-10 70.9 49 75.5
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.0e-08 62.8 78 41.0


User provided reference genes

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