Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 5.3e-37 157.5 101 100.0
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.9e-11 72.0 32 81.2
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 5.0e-11 71.2 31 83.9
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.0e-11 71.2 34 76.5
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.0e-11 71.2 34 76.5
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 5.0e-11 71.2 34 76.5
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 6.5e-11 70.9 34 76.5
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 8.5e-11 70.5 34 73.5
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.1e-10 70.1 32 78.1
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.5e-10 69.7 31 80.6
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 1.5e-10 69.7 32 78.1
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.9e-10 69.3 32 78.1
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.5e-10 68.9 34 73.5
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 2.5e-10 68.9 32 78.1
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 2.5e-10 68.9 32 78.1
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 2.5e-10 68.9 32 75.0
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 2.5e-10 68.9 32 75.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 2.5e-10 68.9 32 75.0
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 2.5e-10 68.9 32 75.0
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 3.2e-10 68.6 34 73.5
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 3.2e-10 68.6 34 73.5
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 3.2e-10 68.6 34 73.5
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 3.2e-10 68.6 34 73.5
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 4.2e-10 68.2 30 80.0
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 4.2e-10 68.2 32 75.0
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 4.2e-10 68.2 30 83.3
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 4.2e-10 68.2 34 73.5
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 4.2e-10 68.2 30 83.3
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 5.5e-10 67.8 30 80.0
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 5.5e-10 67.8 30 80.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 5.5e-10 67.8 28 89.3
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 5.5e-10 67.8 30 80.0
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 5.5e-10 67.8 30 80.0
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 5.5e-10 67.8 30 80.0
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 5.5e-10 67.8 30 76.7
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 5.5e-10 67.8 29 82.8
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 7.2e-10 67.4 32 75.0
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 7.2e-10 67.4 32 75.0
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 7.2e-10 67.4 30 80.0
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 7.2e-10 67.4 30 80.0
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 7.2e-10 67.4 34 70.6
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 7.2e-10 67.4 34 70.6
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 7.2e-10 67.4 30 80.0
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 7.2e-10 67.4 32 78.1
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 9.4e-10 67.0 29 82.8
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 9.4e-10 67.0 29 82.8
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 9.4e-10 67.0 30 76.7
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 9.4e-10 67.0 30 80.0
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 9.4e-10 67.0 34 67.6
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.2e-09 66.6 34 70.6
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.2e-09 66.6 32 75.0
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.6e-09 66.2 31 74.2
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.6e-09 66.2 31 71.0
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.1e-09 65.9 32 71.9
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.1e-09 65.9 32 71.9
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.1e-09 65.9 32 71.9
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.1e-09 65.9 32 75.0
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 2.7e-09 65.5 30 76.7
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 2.7e-09 65.5 30 76.7
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.7e-09 65.5 32 75.0
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 2.7e-09 65.5 30 76.7
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 3.6e-09 65.1 31 71.0
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.6e-09 65.1 32 68.8
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 3.6e-09 65.1 32 75.0
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 3.6e-09 65.1 32 68.8
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 4.7e-09 64.7 31 71.0
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 4.7e-09 64.7 29 79.3
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 6.1e-09 64.3 30 73.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 6.1e-09 64.3 28 78.6
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 6.1e-09 64.3 32 71.9
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 6.1e-09 64.3 30 73.3
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 8.0e-09 63.9 29 75.9
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.0e-08 63.5 30 73.3
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.0e-08 63.5 29 75.9
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.0e-08 63.5 30 73.3
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.4e-08 63.2 28 75.0
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.8e-08 62.8 30 73.3
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.8e-08 62.8 30 73.3
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.8e-08 62.8 30 73.3
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.8e-08 62.8 30 73.3
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.8e-08 62.8 29 72.4
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.3e-08 62.4 30 70.0
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.3e-08 62.4 30 70.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.3e-08 62.4 30 73.3
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 2.3e-08 62.4 30 73.3
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 2.3e-08 62.4 30 73.3
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 3.0e-08 62.0 30 70.0
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.0e-08 62.0 30 73.3
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 4.0e-08 61.6 32 68.8
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 4.0e-08 61.6 30 70.0
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 5.2e-08 61.2 30 70.0
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 5.2e-08 61.2 30 70.0
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 5.2e-08 61.2 30 70.0
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 5.2e-08 61.2 30 70.0
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 5.2e-08 61.2 30 70.0
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 6.7e-08 60.8 30 66.7
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 8.8e-08 60.5 32 65.6
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.1e-07 60.1 31 64.5
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.1e-07 60.1 31 64.5
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.6e-07 58.9 28 67.9
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.7e-07 57.8 30 66.7
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.2e-06 55.8 30 63.3
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 2.8e-06 55.5 31 61.3


User provided reference genes

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