Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 7.0e-37 156.8 78 100.0
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 8.9e-16 86.7 52 75.0
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 1.2e-15 86.3 63 69.8
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.0e-15 85.5 52 75.0
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 2.0e-15 85.5 53 71.7
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 2.6e-15 85.1 52 78.8
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 4.4e-15 84.3 63 65.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 7.5e-15 83.6 57 70.2
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 9.8e-15 83.2 53 73.6
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.3e-14 82.8 63 61.9
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 2.2e-14 82.0 53 67.9
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 2.2e-14 82.0 51 70.6
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 2.2e-14 82.0 55 67.3
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.9e-14 81.6 53 71.7
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.9e-14 81.6 53 71.7
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 2.9e-14 81.6 55 65.5
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.9e-14 81.6 53 71.7
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 2.9e-14 81.6 65 61.5
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 2.9e-14 81.6 52 69.2
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 2.9e-14 81.6 51 70.6
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 2.9e-14 81.6 59 64.4
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 3.7e-14 81.3 52 71.2
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.7e-14 81.3 51 70.6
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 3.7e-14 81.3 52 71.2
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 4.9e-14 80.9 59 64.4
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 4.9e-14 80.9 58 65.5
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.9e-14 80.9 63 60.3
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 6.3e-14 80.5 51 68.6
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 6.3e-14 80.5 57 68.4
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 8.3e-14 80.1 51 66.7
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 8.3e-14 80.1 52 67.3
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 8.3e-14 80.1 57 64.9
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 8.3e-14 80.1 63 61.9
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 8.3e-14 80.1 64 57.8
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.1e-13 79.7 53 69.8
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 1.1e-13 79.7 57 66.7
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 1.4e-13 79.3 62 56.5
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.4e-13 79.3 62 61.3
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.4e-13 79.3 53 69.8
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.4e-13 78.6 61 60.7
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.4e-13 78.6 63 61.9
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 2.4e-13 78.6 64 56.2
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 3.2e-13 78.2 63 61.9
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 3.2e-13 78.2 57 61.4
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 3.2e-13 78.2 58 63.8
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 3.2e-13 78.2 63 61.9
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 4.1e-13 77.8 57 64.9
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 4.1e-13 77.8 65 63.1
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 4.1e-13 77.8 65 63.1
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 4.1e-13 77.8 51 66.7
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 5.4e-13 77.4 60 58.3
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 5.4e-13 77.4 52 67.3
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 5.4e-13 77.4 51 64.7
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 5.4e-13 77.4 56 62.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 7.0e-13 77.0 53 66.0
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 9.2e-13 76.6 51 68.6
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 9.2e-13 76.6 65 58.5
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 9.2e-13 76.6 53 66.0
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 9.2e-13 76.6 53 64.2
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 1.2e-12 76.3 53 66.0
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.2e-12 76.3 52 65.4
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 1.2e-12 76.3 67 59.7
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 1.6e-12 75.9 58 56.9
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 1.6e-12 75.9 52 63.5
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 1.6e-12 75.9 52 65.4
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.0e-12 75.5 65 58.5
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.0e-12 75.5 59 59.3
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 2.0e-12 75.5 52 67.3
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 2.7e-12 75.1 65 56.9
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 2.7e-12 75.1 53 67.9
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 2.7e-12 75.1 51 66.7
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 3.5e-12 74.7 53 60.4
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.5e-12 74.7 62 58.1
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 4.6e-12 74.3 51 68.6
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 4.6e-12 74.3 53 60.4
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 5.9e-12 73.9 53 62.3
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 5.9e-12 73.9 53 62.3
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 5.9e-12 73.9 62 56.5
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 5.9e-12 73.9 51 64.7
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 7.8e-12 73.6 59 57.6
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 7.8e-12 73.6 65 58.5
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.0e-11 73.2 53 64.2
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 1.7e-11 72.4 65 56.9
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.7e-11 72.4 51 62.7
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 2.3e-11 72.0 65 56.9
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 2.3e-11 72.0 52 61.5
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 2.9e-11 71.6 58 55.2
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.9e-11 71.6 48 66.7
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 3.9e-11 71.2 55 60.0
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.9e-11 71.2 51 60.8
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 5.0e-11 70.9 56 58.9
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 6.6e-11 70.5 57 61.4
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 6.6e-11 70.5 51 58.8
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 8.6e-11 70.1 57 59.6
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 8.6e-11 70.1 57 59.6
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.6e-11 70.1 59 55.9
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 1.5e-10 69.3 51 62.7
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.9e-10 68.9 57 61.4
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 2.5e-10 68.6 50 62.0
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 3.3e-10 68.2 57 56.1
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 4.3e-10 67.8 50 64.0
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 4.3e-10 67.8 50 64.0
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.2e-09 66.2 45 62.2
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.2e-09 66.2 45 62.2
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 3.6e-09 64.7 51 58.8
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 1.4e-08 62.8 46 60.9
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 2.3e-08 62.0 50 62.0
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.1e-08 61.6 50 58.0
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 6.8e-08 60.5 37 70.3
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 8.9e-08 60.1 46 60.9
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 2.0e-07 58.9 42 59.5


User provided reference genes

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