Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.6e-36 155.6 78 100.0
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 2.0e-20 102.1 60 78.3
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.3e-19 99.4 60 75.0
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 1.7e-19 99.0 60 75.0
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 2.9e-19 98.2 60 75.0
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 2.9e-19 98.2 60 75.0
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 3.8e-19 97.8 60 75.0
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 3.8e-19 97.8 60 73.3
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 5.0e-19 97.4 58 75.9
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 5.0e-19 97.4 60 73.3
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 6.6e-19 97.1 70 67.1
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 6.6e-19 97.1 60 73.3
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 6.6e-19 97.1 60 76.7
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 6.6e-19 97.1 58 75.9
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 6.6e-19 97.1 58 75.9
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 8.6e-19 96.7 60 73.3
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 8.6e-19 96.7 60 75.0
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 8.6e-19 96.7 60 73.3
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.5e-18 95.9 60 75.0
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.5e-18 95.9 60 75.0
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.9e-18 95.5 60 73.3
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 1.9e-18 95.5 61 70.5
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 1.9e-18 95.5 58 74.1
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 1.9e-18 95.5 60 75.0
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 2.5e-18 95.1 60 73.3
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 3.3e-18 94.7 60 73.3
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 4.2e-18 94.4 60 73.3
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 5.5e-18 94.0 60 73.3
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 7.2e-18 93.6 60 75.0
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 7.2e-18 93.6 60 71.7
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 9.5e-18 93.2 60 68.3
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 9.5e-18 93.2 60 68.3
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 9.5e-18 93.2 60 73.3
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 1.2e-17 92.8 60 71.7
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 1.2e-17 92.8 60 73.3
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 1.2e-17 92.8 60 71.7
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.6e-17 92.4 60 70.0
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 1.6e-17 92.4 60 71.7
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.6e-17 92.4 60 71.7
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 1.6e-17 92.4 60 71.7
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.6e-17 92.4 60 71.7
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 1.6e-17 92.4 60 68.3
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.1e-17 92.0 58 70.7
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.1e-17 92.0 58 70.7
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 2.1e-17 92.0 60 71.7
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.1e-17 92.0 60 71.7
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 2.1e-17 92.0 54 75.9
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 2.8e-17 91.7 54 79.6
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 3.6e-17 91.3 60 70.0
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 3.6e-17 91.3 54 74.1
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 3.6e-17 91.3 60 68.3
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 4.7e-17 90.9 51 82.4
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 4.7e-17 90.9 54 79.6
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.7e-17 90.9 54 79.6
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.7e-17 90.9 54 79.6
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 4.7e-17 90.9 60 70.0
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 8.0e-17 90.1 60 70.0
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 8.0e-17 90.1 60 68.3
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 8.0e-17 90.1 60 70.0
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 8.0e-17 90.1 60 70.0
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.0e-17 90.1 54 77.8
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 1.0e-16 89.7 60 68.3
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.0e-16 89.7 54 77.8
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 1.4e-16 89.4 56 73.2
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.4e-16 89.4 50 84.0
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.4e-16 89.4 50 84.0
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 1.8e-16 89.0 51 78.4
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 2.3e-16 88.6 60 70.0
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 2.3e-16 88.6 55 78.2
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 3.0e-16 88.2 61 68.9
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 3.0e-16 88.2 60 68.3
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 3.0e-16 88.2 60 65.0
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 4.0e-16 87.8 55 72.7
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 4.0e-16 87.8 55 72.7
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 4.0e-16 87.8 55 72.7
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 4.0e-16 87.8 54 74.1
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 4.0e-16 87.8 60 66.7
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 4.0e-16 87.8 58 70.7
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 5.2e-16 87.4 61 68.9
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 5.2e-16 87.4 61 68.9
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 5.2e-16 87.4 54 70.4
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 6.8e-16 87.0 60 61.7
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 6.8e-16 87.0 60 68.3
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 8.9e-16 86.7 60 65.0
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 8.9e-16 86.7 60 65.0
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 1.2e-15 86.3 60 65.0
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 1.2e-15 86.3 51 78.4
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.5e-15 85.9 58 65.5
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.5e-15 85.9 51 78.4
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 2.6e-15 85.1 60 66.7
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 2.6e-15 85.1 60 66.7
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.6e-15 85.1 60 66.7
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 3.4e-15 84.7 54 72.2
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 3.4e-15 84.7 60 65.0
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.4e-15 84.3 50 76.0
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 5.7e-15 84.0 52 76.9
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 5.7e-15 84.0 50 76.0
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 5.7e-15 84.0 47 83.0
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 7.5e-15 83.6 54 72.2
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 7.5e-15 83.6 60 63.3
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 9.8e-15 83.2 47 78.7
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 9.8e-15 83.2 49 77.6
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 9.8e-15 83.2 56 66.1
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 9.8e-15 83.2 50 76.0
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 2.2e-14 82.0 59 66.1
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 2.2e-14 82.0 47 78.7
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 2.2e-14 82.0 58 63.8
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 2.2e-14 82.0 58 63.8
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 2.9e-14 81.6 47 78.7
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 4.9e-14 80.9 51 70.6
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 4.9e-14 80.9 47 76.6
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 4.9e-14 80.9 59 64.4
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 8.3e-14 80.1 55 69.1
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 1.1e-13 79.7 55 65.5
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 1.8e-13 79.0 50 72.0
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 4.1e-13 77.8 51 70.6
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 5.4e-13 77.4 46 76.1
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 5.4e-13 77.4 58 65.5
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 2.0e-12 75.5 47 70.2
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 2.3e-11 72.0 60 56.7
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 2.9e-11 71.6 47 68.1
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 3.9e-11 71.2 38 84.2
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 3.9e-11 71.2 49 67.3
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 3.9e-11 71.2 40 82.5
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 5.0e-11 70.9 55 63.6
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 5.0e-11 70.9 52 65.4
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.1e-10 69.7 49 61.2
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 8.0e-09 63.5 52 57.7


User provided reference genes

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