Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 2.2e-221 771.9 380 100.0
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 8.7e-125 451.1 365 59.7
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.4e-119 433.7 367 56.9
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 9.3e-119 431.0 367 56.9
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 3.5e-118 429.1 365 57.3
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.3e-117 427.2 367 55.3
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.3e-117 427.2 376 54.0
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 6.7e-117 424.9 365 56.4
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 4.3e-116 422.2 365 56.2
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 9.7e-116 421.0 365 57.0
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.3e-115 420.6 365 56.7
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 4.8e-115 418.7 369 56.6
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 4.1e-114 415.6 365 57.5
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 4.1e-114 415.6 367 55.3
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 5.3e-114 415.2 366 56.8
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 6.9e-114 414.8 365 55.9
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 1.2e-113 414.1 366 56.6
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.5e-113 413.7 369 55.3
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 2.0e-113 413.3 368 54.3
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 5.9e-113 411.8 365 56.4
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 5.9e-113 411.8 367 55.0
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.0e-112 411.0 369 55.0
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.3e-112 410.6 367 54.8
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.7e-112 410.2 366 56.0
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 2.2e-112 409.8 376 54.8
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 2.2e-112 409.8 367 54.5
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 2.9e-112 409.5 365 55.3
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 2.7e-110 402.9 366 53.8
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 2.7e-110 402.9 370 54.6
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 6.1e-110 401.7 368 53.5
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 6.1e-110 401.7 358 55.9
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 6.1e-110 401.7 368 53.0
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.4e-109 400.6 389 53.5
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 1.8e-109 400.2 366 53.0
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 2.3e-109 399.8 371 52.8
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 3.0e-109 399.4 365 54.5
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 3.0e-109 399.4 365 52.3
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 8.8e-109 397.9 374 52.7
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 2.0e-108 396.7 367 54.8
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 3.3e-108 396.0 368 51.6
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 3.3e-108 396.0 372 52.4
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 9.7e-108 394.4 368 52.2
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 9.7e-108 394.4 364 53.0
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 2.2e-107 393.3 378 54.0
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 2.8e-107 392.9 366 52.7
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 2.8e-107 392.9 368 54.3
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 4.8e-107 392.1 365 53.4
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 6.3e-107 391.7 365 52.1
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 4.1e-106 389.0 369 51.8
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 6.9e-106 388.3 365 55.3
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 6.9e-106 388.3 374 50.8
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 6.9e-106 388.3 369 51.2
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 9.1e-106 387.9 368 52.4
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 3.4e-105 386.0 369 50.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.5e-105 385.6 367 51.8
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 4.5e-105 385.6 369 51.2
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 5.9e-105 385.2 371 51.2
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 5.9e-105 385.2 371 51.2
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 7.7e-105 384.8 366 52.5
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 1.0e-104 384.4 369 50.9
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.3e-104 384.0 365 51.8
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 3.8e-104 382.5 385 51.4
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 3.8e-104 382.5 365 52.1
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 1.9e-103 380.2 367 52.9
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 4.2e-103 379.0 366 51.9
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 4.2e-103 379.0 365 52.6
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 7.2e-103 378.3 366 50.8
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 2.1e-102 376.7 366 52.7
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 2.1e-102 376.7 369 51.2
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 7.9e-102 374.8 364 51.9
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.4e-101 374.0 370 51.6
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.8e-101 373.6 380 48.2
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 2.3e-101 373.2 366 51.9
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 2.3e-101 373.2 366 52.2
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 2.3e-101 373.2 365 51.8
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 3.9e-101 372.5 366 49.7
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 6.7e-101 371.7 380 50.0
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 2.0e-100 370.2 363 49.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 2.6e-100 369.8 365 50.7
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 3.3e-100 369.4 366 51.6
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 3.3e-100 369.4 366 50.8
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 2.2e-99 366.7 364 50.0
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 6.3e-99 365.2 364 50.8
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 1.2e-97 360.9 365 51.0
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 5.0e-96 355.5 299 55.5
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 2.1e-94 350.1 365 49.3
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 6.1e-94 348.6 368 48.6
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 1.4e-93 347.4 342 50.6
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 5.2e-93 345.5 366 48.1
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 7.4e-92 341.7 334 51.5
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 3.7e-91 339.3 288 58.0
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 1.7e-88 330.5 366 47.3
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 8.5e-88 328.2 298 53.7
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 3.7e-83 312.8 318 48.4
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 8.2e-83 311.6 301 52.2
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 2.7e-81 306.6 380 42.6
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 3.6e-70 269.6 364 42.9
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 7.3e-63 245.4 311 41.8
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 1.2e-41 174.9 376 32.7
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 2.4e-37 160.6 238 41.2
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 2.6e-36 157.1 124 62.1
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 1.3e-32 144.8 200 42.0
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.6e-30 137.9 475 26.1
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 1.9e-23 114.4 436 25.9
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 2.3e-16 90.9 89 49.4
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.2e-12 78.6 122 36.9
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 1.5e-12 78.2 68 55.9
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.3e-11 75.1 99 44.4
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.0e-08 65.5 41 65.9
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 2.5e-07 60.8 46 63.0


User provided reference genes

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