Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0629G069 Amborella trichopoda HOM05D001921 ORTHO05D001784 3.2e-120 435.3 244 100.0
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 1.2e-15 87.8 256 32.4
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.0e-13 80.5 252 29.8
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 3.4e-13 79.7 256 28.1
Lsat_1_v5_gn_6_115320 Lactuca sativa HOM05D001921 ORTHO05D001784 1.2e-10 71.2 263 30.0
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.7e-10 70.1 82 47.6
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.5e-10 69.7 78 50.0
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.5e-10 69.7 78 50.0
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 3.5e-10 69.7 78 48.7
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 1.7e-09 67.4 264 27.3
ECA246G3871 Erigeron canadensis HOM05D001921 ORTHO05D001784 2.3e-09 67.0 71 47.9
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 3.0e-09 66.6 78 52.6
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 3.0e-09 66.6 256 28.9
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 3.0e-09 66.6 256 28.9
Thecc.04G273300 Theobroma cacao HOM05D001921 ORTHO05D001784 3.0e-09 66.6 155 32.3
CANSAT78G1722 Cannabis sativa HOM05D001921 ORTHO05D001784 6.6e-09 65.5 77 45.5
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 6.6e-09 65.5 160 33.8
Gohir.A09G060900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 6.6e-09 65.5 252 29.0
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 6.6e-09 65.5 81 48.1
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 8.6e-09 65.1 78 52.6
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 1.1e-08 64.7 253 29.2
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 1.5e-08 64.3 77 45.5
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 1.9e-08 63.9 78 44.9
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 1.9e-08 63.9 78 47.4
Manes.03G188600 Manihot esculenta HOM05D001921 ORTHO05D001784 2.5e-08 63.5 80 46.2
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 2.5e-08 63.5 80 46.2
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 4.3e-08 62.8 257 26.1
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 4.3e-08 62.8 253 28.5
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 4.3e-08 62.8 70 48.6
Gohir.D09G059900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.6e-08 62.4 74 47.3
Gorai.006G074600 Gossypium raimondii HOM05D001921 ORTHO05D001784 5.6e-08 62.4 74 47.3
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 5.6e-08 62.4 252 27.0
Prupe.1G145900 Prunus persica HOM05D001921 ORTHO05D001784 7.3e-08 62.0 81 44.4
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 7.3e-08 62.0 260 28.8
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 9.5e-08 61.6 71 49.3
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.2e-07 61.2 78 44.9
Haze_01021 Corylus avellana HOM05D001921 ORTHO05D001784 1.2e-07 61.2 83 44.6
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 1.6e-07 60.8 68 48.5
Medtr2g020830 Medicago truncatula HOM05D001921 ORTHO05D001784 1.6e-07 60.8 72 47.2
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.6e-07 60.8 68 48.5
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 2.1e-07 60.5 73 49.3
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 2.1e-07 60.5 246 32.1
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.1e-07 60.5 75 44.0
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.8e-07 60.1 250 26.4
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 3.6e-07 59.7 77 42.9
BcaNung03129 Brassica carinata HOM05D001921 ORTHO05D001784 3.6e-07 59.7 71 40.8
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 3.6e-07 59.7 73 46.6
A01p06280 Brassica napus HOM05D001921 ORTHO05D001784 4.7e-07 59.3 72 41.7
Cfa015526 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.7e-07 59.3 81 43.2
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 6.2e-07 58.9 68 47.1
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 6.2e-07 58.9 81 44.4
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 6.2e-07 58.9 66 48.5
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 6.2e-07 58.9 74 47.3
AL7G19870 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 8.1e-07 58.5 74 41.9
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 8.1e-07 58.5 76 43.4
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 8.1e-07 58.5 76 43.4
FAN22G2319 Fragaria x ananassa HOM05D001921 ORTHO05D001784 8.1e-07 58.5 69 44.9
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 8.1e-07 58.5 71 46.5
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 8.1e-07 58.5 71 46.5
CARHR239920 Cardamine hirsuta HOM05D001921 ORTHO05D001784 1.1e-06 58.2 80 41.2
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 1.1e-06 58.2 235 27.7
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.1e-06 58.2 256 27.7
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.1e-06 58.2 70 48.6
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.1e-06 58.2 70 48.6
SalBow2G1161 Salvia bowleyana HOM05D001921 ORTHO05D001784 1.1e-06 58.2 73 42.5
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 1.1e-06 58.2 66 48.5
AT4G32020 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 1.4e-06 57.8 74 41.9
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.4e-06 57.8 257 28.0
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.4e-06 57.8 83 42.2
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.4e-06 57.8 83 42.2
Sabra10G0013000 Salix brachista HOM05D001921 ORTHO05D001784 1.4e-06 57.8 76 46.1
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 1.4e-06 57.8 70 48.6
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 1.8e-06 57.4 87 40.2
Psat1g185920 Pisum sativum HOM05D001921 ORTHO05D001784 1.8e-06 57.4 72 47.2
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.8e-06 57.4 78 43.6
TAR625G0682 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.8e-06 57.4 244 27.9
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.4e-06 57.0 69 47.8
Glyma.15G100300 Glycine max HOM05D001921 ORTHO05D001784 2.4e-06 57.0 73 46.6
RcHm_v2.0_Chr4g0420321 Rosa chinensis HOM05D001921 ORTHO05D001784 2.4e-06 57.0 69 44.9
Sp7g29820 Schrenkiella parvula HOM05D001921 ORTHO05D001784 2.4e-06 57.0 81 38.3
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 3.1e-06 56.6 258 26.7
FAN17G2860 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.1e-06 56.6 71 45.1
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.1e-06 56.6 256 27.0
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 3.1e-06 56.6 68 48.5
TAR625G1323 Trochodendron aralioides HOM05D001921 ORTHO05D001784 3.1e-06 56.6 244 27.9
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 4.0e-06 56.2 74 40.5
Ca_00585_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 4.0e-06 56.2 249 28.5
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 4.0e-06 56.2 68 47.1
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 5.2e-06 55.8 78 42.3
DCAR_002429 Daucus carota HOM05D001921 ORTHO05D001784 5.2e-06 55.8 77 41.6
FvH4_4g16740 Fragaria vesca HOM05D001921 ORTHO05D001784 5.2e-06 55.8 69 43.5
FAN12G2234 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.2e-06 55.8 69 43.5
FAN12G3386 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.2e-06 55.8 69 43.5
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.2e-06 55.8 253 26.9
BraA01t00594Z Brassica rapa HOM05D001921 ORTHO05D001784 6.8e-06 55.5 67 41.8
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 6.8e-06 55.5 71 47.9
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 6.8e-06 55.5 257 27.6
Sed0022941 Sechium edule HOM05D001921 ORTHO05D001784 6.8e-06 55.5 66 48.5
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 6.8e-06 55.5 70 44.3
BcaC09g51990 Brassica carinata HOM05D001921 ORTHO05D001784 8.9e-06 55.1 67 41.8
C01p06910 Brassica napus HOM05D001921 ORTHO05D001784 8.9e-06 55.1 67 41.8
C07p59050 Brassica napus HOM05D001921 ORTHO05D001784 8.9e-06 55.1 80 37.5
BolC7t46353H Brassica oleracea HOM05D001921 ORTHO05D001784 8.9e-06 55.1 80 37.5
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 8.9e-06 55.1 68 45.6
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 8.9e-06 55.1 78 38.5
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 8.9e-06 55.1 247 27.1
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 8.9e-06 55.1 78 44.9
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 8.9e-06 55.1 75 38.7


User provided reference genes

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