Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 8.1e-218 760.4 456 100.0
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.3e-42 178.3 295 41.7
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 3.8e-42 176.8 365 40.5
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.1e-41 175.3 308 43.5
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 7.2e-41 172.6 299 43.8
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 2.1e-40 171.0 484 37.2
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.4e-39 168.3 415 36.4
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.1e-38 165.2 261 43.7
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 7.4e-38 162.5 244 46.7
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 7.4e-38 162.5 113 73.5
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 9.7e-38 162.2 232 44.4
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 1.3e-37 161.8 337 40.7
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 6.3e-37 159.5 151 60.9
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 1.1e-36 158.7 376 37.0
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.1e-36 158.7 157 57.3
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 2.4e-36 157.5 315 41.0
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.4e-36 157.5 312 38.5
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 2.4e-36 157.5 410 35.1
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 3.1e-36 157.1 392 35.7
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 4.1e-36 156.8 302 38.7
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 9.1e-36 155.6 501 39.7
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 9.1e-36 155.6 307 37.8
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 9.1e-36 155.6 396 36.6
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 1.5e-35 154.8 251 45.0
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 2.0e-35 154.5 380 36.3
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 2.0e-35 154.5 237 42.6
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 2.6e-35 154.1 248 44.0
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 2.6e-35 154.1 96 79.2
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 3.5e-35 153.7 393 37.7
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 3.5e-35 153.7 480 33.3
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 5.9e-35 152.9 131 61.8
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 7.7e-35 152.5 131 63.4
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 1.0e-34 152.1 521 33.8
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 1.7e-34 151.4 373 36.5
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.2e-34 151.0 485 33.4
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 2.2e-34 151.0 377 37.7
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 2.9e-34 150.6 269 41.3
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 2.9e-34 150.6 269 41.3
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 2.9e-34 150.6 402 37.6
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 2.9e-34 150.6 311 36.3
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 3.8e-34 150.2 258 43.8
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 3.8e-34 150.2 140 59.3
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 5.0e-34 149.8 461 35.6
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 5.0e-34 149.8 129 60.5
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 6.5e-34 149.4 359 36.2
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 6.5e-34 149.4 104 69.2
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 8.5e-34 149.1 239 43.1
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 1.1e-33 148.7 397 40.1
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.1e-33 148.7 390 38.7
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 1.1e-33 148.7 308 42.2
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.1e-33 148.7 481 38.7
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.4e-33 148.3 399 35.6
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.9e-33 147.9 311 37.0
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 2.5e-33 147.5 235 43.4
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 4.2e-33 146.7 489 33.9
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 5.5e-33 146.4 131 58.0
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 5.5e-33 146.4 396 34.8
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 1.6e-32 144.8 359 40.1
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 1.6e-32 144.8 360 34.7
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 1.6e-32 144.8 301 38.2
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 2.1e-32 144.4 373 38.1
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 2.7e-32 144.1 355 35.5
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 2.7e-32 144.1 531 32.6
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 3.6e-32 143.7 504 31.7
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.7e-32 143.3 318 37.4
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 4.7e-32 143.3 104 67.3
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 6.1e-32 142.9 247 49.0
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.0e-31 142.1 394 35.3
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.8e-31 141.4 121 62.0
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 2.3e-31 141.0 248 42.3
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 3.0e-31 140.6 244 41.0
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 3.9e-31 140.2 243 41.2
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 3.9e-31 140.2 243 41.2
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 5.2e-31 139.8 362 38.4
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 5.2e-31 139.8 407 31.2
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 5.2e-31 139.8 407 31.2
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 5.2e-31 139.8 480 34.8
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 6.7e-31 139.4 362 35.6
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 8.8e-31 139.0 246 43.5
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 8.8e-31 139.0 246 44.3
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-30 138.7 111 64.9
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-30 138.7 110 63.6
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 3.3e-30 137.1 501 38.1
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.4e-30 136.7 318 34.9
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 7.4e-30 136.0 368 37.5
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 9.7e-30 135.6 411 34.8
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 9.7e-30 135.6 397 32.5
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 4.8e-29 133.3 475 34.5
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 1.1e-28 132.1 331 33.5
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 1.4e-28 131.7 407 31.2
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 1.8e-28 131.3 246 41.5
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 1.8e-28 131.3 468 31.6
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 1.8e-28 131.3 427 33.3
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 2.4e-28 131.0 373 33.2
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 3.1e-28 130.6 504 32.9
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 1.2e-27 128.6 248 40.7
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.2e-27 128.6 496 33.3
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.6e-27 128.3 76 80.3
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.6e-27 128.3 483 33.1
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 7.7e-27 125.9 409 35.0
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.7e-26 124.8 478 33.9
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 8.0e-24 115.9 274 35.0
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.0e-23 113.6 432 29.4
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 2.6e-22 110.9 499 30.5
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 9.7e-22 109.0 147 48.3
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 2.0e-19 101.3 65 75.4
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 5.5e-17 93.2 67 64.2
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 8.0e-16 89.4 50 84.0
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 5.2e-15 86.7 51 84.3
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 2.0e-14 84.7 51 80.4
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 5.7e-14 83.2 241 32.8
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 9.8e-14 82.4 51 78.4
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 9.1e-12 75.9 251 30.7
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 6.6e-10 69.7 50 70.0
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 1.9e-09 68.2 349 33.2
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 2.5e-09 67.8 52 59.6
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 6.1e-08 63.2 104 39.4
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 2.0e-06 58.2 324 32.1
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 3.4e-06 57.4 91 39.6
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 4.4e-06 57.0 420 28.8


User provided reference genes

Program Settings