Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 3.5e-106 388.3 190 100.0
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 9.0e-54 214.2 174 60.9
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 4.4e-53 211.8 174 61.5
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 4.4e-53 211.8 174 61.5
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.6e-53 211.1 174 62.1
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.3e-52 210.3 173 59.5
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-52 210.3 174 62.1
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 1.7e-52 209.9 176 63.1
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 3.8e-52 208.8 175 62.3
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.9e-52 208.4 174 61.5
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 6.4e-52 208.0 173 59.5
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 8.4e-52 207.6 175 60.0
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-52 207.6 174 61.5
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 1.1e-51 207.2 178 60.7
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.1e-51 207.2 170 60.0
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 1.1e-51 207.2 171 59.1
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-51 206.8 174 60.3
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.9e-51 206.5 182 58.2
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 3.2e-51 205.7 173 59.5
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 5.4e-51 204.9 182 57.1
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 7.1e-51 204.5 176 60.2
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 9.3e-51 204.1 170 60.6
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 9.3e-51 204.1 173 59.5
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 9.3e-51 204.1 174 59.2
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.2e-50 203.8 177 57.1
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.6e-50 203.4 175 61.1
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.1e-50 203.0 178 55.6
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 3.5e-50 202.2 175 60.6
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 3.5e-50 202.2 175 60.6
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 4.6e-50 201.8 175 60.0
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 4.6e-50 201.8 172 60.5
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 6.0e-50 201.4 175 61.7
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 7.9e-50 201.1 174 60.3
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 7.9e-50 201.1 172 58.7
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.0e-49 200.7 173 59.0
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 1.0e-49 200.7 174 58.0
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 1.3e-49 200.3 181 54.7
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.3e-49 200.3 175 59.4
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.3e-49 200.3 192 53.6
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 3.0e-49 199.1 188 54.8
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 3.0e-49 199.1 175 60.0
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 3.0e-49 199.1 161 59.6
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 6.6e-49 198.0 172 59.3
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 6.6e-49 198.0 175 60.0
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 8.7e-49 197.6 173 53.8
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.1e-48 197.2 175 58.9
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.1e-48 197.2 170 59.4
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.5e-48 196.8 175 57.7
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.5e-48 196.8 172 57.6
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.5e-48 196.8 179 55.9
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.5e-48 196.8 175 57.7
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 2.5e-48 196.1 174 58.6
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 2.5e-48 196.1 176 58.5
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.3e-48 195.7 167 59.9
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 3.3e-48 195.7 179 55.9
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 3.3e-48 195.7 177 58.8
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 4.3e-48 195.3 172 58.1
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.3e-47 193.7 177 55.9
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.6e-47 193.4 175 58.3
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 2.1e-47 193.0 177 56.5
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 2.8e-47 192.6 170 57.6
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 2.8e-47 192.6 188 55.3
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 8.1e-47 191.0 180 53.3
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 1.1e-46 190.7 183 54.6
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-46 190.3 173 57.2
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.4e-46 190.3 165 58.2
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 3.1e-46 189.1 184 54.9
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 3.1e-46 189.1 196 52.0
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 5.3e-46 188.3 171 55.6
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 6.9e-46 188.0 184 56.0
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 7.6e-45 184.5 170 57.6
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 2.2e-44 183.0 177 55.9
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-43 180.3 171 56.1
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.9e-43 179.9 184 53.3
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 1.9e-43 179.9 170 55.3
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 4.2e-43 178.7 162 56.2
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.1e-43 177.9 170 54.1
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 7.9e-42 174.5 152 59.2
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.0e-41 174.1 175 57.1
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.8e-41 173.3 146 61.0
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.7e-41 171.4 172 54.7
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 6.7e-41 171.4 141 62.4
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.1e-40 170.6 146 59.6
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 1.9e-40 169.9 141 61.7
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.5e-40 169.5 152 57.9
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-39 166.4 157 56.7
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-38 164.1 174 52.9
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 1.8e-38 163.3 179 48.6
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 5.3e-38 161.8 167 52.1
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.2e-36 156.4 125 64.0
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 2.9e-36 156.0 178 44.9
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.5e-34 149.1 142 54.9
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 3.9e-33 145.6 173 49.1
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 8.7e-33 144.4 126 57.9
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 1.1e-30 137.5 175 44.0
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-28 127.9 148 48.6
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 2.5e-27 126.3 176 44.3
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 5.5e-27 125.2 137 48.9
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.5e-20 101.3 126 48.4
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 8.8e-17 91.3 62 66.1
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-14 83.6 75 57.3
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 5.3e-14 82.0 97 44.3
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 7.4e-08 61.6 135 32.6


User provided reference genes

Program Settings