Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 4.2e-237 824.3 426 100.0
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.8e-78 297.4 360 46.9
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 2.1e-74 283.9 357 46.5
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 3.9e-73 279.6 356 46.6
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 8.4e-68 261.9 386 40.9
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 3.2e-67 260.0 361 43.2
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.6e-66 257.7 362 43.4
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 3.5e-66 256.5 364 43.4
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 7.9e-66 255.4 364 43.1
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.3e-65 254.6 386 40.4
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 5.1e-65 252.7 358 44.1
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.9e-64 250.8 358 43.3
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 3.3e-64 250.0 361 43.2
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 9.6e-64 248.4 363 42.4
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.3e-63 248.1 361 42.7
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 4.0e-62 243.0 357 41.5
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 5.3e-62 242.7 383 40.5
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 2.6e-61 240.4 365 41.1
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 4.5e-61 239.6 390 43.1
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.0e-60 238.4 361 42.4
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.3e-60 238.0 357 42.6
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 1.7e-60 237.7 364 42.9
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.2e-60 237.3 361 42.1
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 2.9e-60 236.9 355 41.4
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.9e-60 236.1 389 40.6
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 8.4e-60 235.3 356 41.9
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 8.4e-60 235.3 367 40.9
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.9e-59 234.2 361 42.4
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.9e-59 234.2 406 39.7
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 5.5e-59 232.6 354 40.7
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 5.5e-59 232.6 392 39.0
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 5.5e-59 232.6 387 40.3
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 2.3e-57 227.3 379 39.6
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 2.5e-56 223.8 370 39.5
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.6e-55 221.1 404 38.4
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 6.2e-55 219.2 369 40.1
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.1e-54 218.4 352 40.9
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.1e-54 218.4 314 42.7
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 3.1e-54 216.9 358 40.8
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 5.3e-54 216.1 356 39.0
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.5e-53 214.5 361 39.9
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.6e-53 213.8 351 39.6
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 4.5e-53 213.0 358 38.8
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 5.8e-53 212.6 342 41.8
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 7.6e-53 212.2 353 38.8
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.0e-52 211.8 358 38.0
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.3e-52 211.5 359 40.1
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 2.9e-52 210.3 364 39.3
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 2.9e-52 210.3 365 40.0
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 2.9e-52 210.3 369 38.5
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 6.5e-52 209.1 349 39.3
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 8.4e-52 208.8 318 40.6
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.4e-51 208.0 363 38.0
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 9.3e-51 205.3 391 37.3
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 1.2e-50 204.9 368 38.0
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 1.6e-50 204.5 372 36.8
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.9e-50 202.2 372 36.3
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 2.3e-49 200.7 368 36.4
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 8.7e-49 198.7 360 35.6
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 3.3e-48 196.8 362 36.5
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 7.4e-48 195.7 356 37.6
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 7.4e-48 195.7 352 38.9
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 3.7e-47 193.4 309 39.2
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 6.3e-47 192.6 381 37.0
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 8.2e-47 192.2 359 37.9
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.1e-46 191.8 371 37.2
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 3.4e-45 186.8 361 37.4
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 7.7e-45 185.7 376 35.4
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 1.0e-44 185.3 356 38.8
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.3e-44 184.9 362 39.5
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 2.9e-44 183.7 318 38.4
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 5.0e-44 183.0 350 39.1
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 6.5e-44 182.6 397 33.0
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 1.4e-43 181.4 295 39.0
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 7.2e-43 179.1 361 36.3
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 9.4e-43 178.7 361 35.7
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 3.6e-42 176.8 354 37.3
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.0e-41 175.3 189 49.7
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.4e-41 174.9 352 37.2
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.4e-41 174.9 346 36.4
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.4e-41 174.9 186 50.0
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.3e-41 174.1 352 36.6
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 3.9e-41 173.3 386 34.7
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 5.1e-41 172.9 351 36.2
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 6.7e-41 172.6 343 39.4
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 8.8e-41 172.2 353 36.5
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 8.8e-41 172.2 320 35.6
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 4.3e-40 169.9 356 34.8
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 5.7e-40 169.5 354 36.4
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 7.4e-40 169.1 322 34.5
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 2.8e-39 167.2 350 34.3
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 2.8e-39 167.2 353 36.5
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 2.8e-39 167.2 352 36.4
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 4.8e-39 166.4 355 34.9
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 6.3e-39 166.0 331 35.6
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.4e-38 164.9 351 36.2
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.8e-38 164.5 354 35.9
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 3.1e-38 163.7 354 35.6
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 3.1e-38 163.7 388 33.0
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 4.1e-38 163.3 355 34.4
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 2.6e-37 160.6 471 31.8
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 3.4e-37 160.2 299 33.8
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-36 158.3 269 37.5
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 1.7e-36 157.9 362 35.1
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.7e-36 157.9 291 36.4
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 2.5e-35 154.1 353 35.4
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 8.8e-33 145.6 201 44.3
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 2.0e-32 144.4 269 37.2
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 5.7e-32 142.9 394 31.7
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 2.6e-29 134.0 224 38.4
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 1.3e-28 131.7 362 30.7
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 2.5e-27 127.5 271 35.4
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 2.5e-27 127.5 271 35.4
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 2.5e-27 127.5 271 35.4
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.2e-26 125.2 214 36.9
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 2.7e-26 124.0 420 27.4
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.3e-25 120.9 218 38.5
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 3.9e-25 120.2 260 35.8
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 5.2e-25 119.8 227 37.0
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 6.3e-23 112.8 95 60.0
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 1.8e-22 111.3 214 39.7
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 7.7e-21 105.9 424 24.3
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 5.0e-20 103.2 352 30.4
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 5.5e-19 99.8 261 31.4
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 3.0e-17 94.0 218 34.4
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.2e-16 92.0 120 41.7
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.6e-13 81.6 111 37.8
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 3.5e-13 80.5 93 50.5
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 1.9e-11 74.7 192 25.5
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 1.9e-11 74.7 101 45.5
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 9.4e-11 72.4 105 37.1
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 8.0e-10 69.3 200 27.5
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.8e-09 68.2 64 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.3e-09 67.8 409 23.2
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 3.0e-09 67.4 92 37.0
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.2e-08 65.5 65 55.4
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.2e-08 65.5 65 55.4
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 4.4e-08 63.5 174 29.9
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 4.9e-07 60.1 50 60.0
SEGI_02099 Sequoiadendron giganteum HOM05D005675 ORTHO05D385164 5.4e-06 56.6 89 39.3


User provided reference genes

Program Settings