Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G273 Amborella trichopoda HOM05D004018 ORTHO05D004408 0.0e+00 1094.3 607 100.0
Oeu028079.1 Olea europaea HOM05D004018 ORTHO05D004408 3.0e-71 273.9 649 35.1
TAR633G0135 Trochodendron aralioides HOM05D004018 ORTHO05D004408 5.7e-70 269.6 669 35.9
TAR365G0909 Trochodendron aralioides HOM05D004018 ORTHO05D004408 4.9e-69 266.5 634 35.3
TAR365G0933 Trochodendron aralioides HOM05D004018 ORTHO05D004408 4.9e-69 266.5 636 35.2
Duzib138G0587 Durio zibethinus HOM05D004018 ORTHO05D004408 2.9e-66 257.3 656 34.8
PSO407G0422 Papaver somniferum HOM05D004018 ORTHO05D004408 2.5e-65 254.2 621 34.6
PSO170G1481 Papaver somniferum HOM05D004018 ORTHO05D004408 4.3e-65 253.4 623 35.5
CANSAT25G1423 Cannabis sativa HOM05D004018 ORTHO05D004408 3.6e-64 250.4 612 36.1
GSVIVG01011103001 Vitis vinifera HOM05D004018 ORTHO05D004408 4.7e-64 250.0 697 33.1
Nn4g26185 Nelumbo nucifera HOM05D004018 ORTHO05D004408 1.0e-63 248.8 607 34.3
Gorai.004G215600 Gossypium raimondii HOM05D004018 ORTHO05D004408 1.8e-63 248.1 587 36.6
Gorai.008G005300 Gossypium raimondii HOM05D004018 ORTHO05D004408 3.1e-63 247.3 627 34.4
Gohir.A12G005900 Gossypium hirsutum HOM05D004018 ORTHO05D004408 3.4e-62 243.8 627 34.4
Gohir.A08G185500 Gossypium hirsutum HOM05D004018 ORTHO05D004408 9.8e-62 242.3 632 36.6
Nitab4.5_0001028g0170 Nicotiana tabacum HOM05D004018 ORTHO05D004408 1.7e-61 241.5 616 34.4
Thecc.01G282900 Theobroma cacao HOM05D004018 ORTHO05D004408 1.7e-61 241.5 658 35.0
Actinidia09153 Actinidia chinensis HOM05D004018 ORTHO05D004408 2.9e-61 240.7 707 31.0
AL1G12800 Arabidopsis lyrata HOM05D004018 ORTHO05D004408 3.7e-61 240.4 620 33.7
Sopen09g026560 Solanum pennellii HOM05D004018 ORTHO05D004408 4.9e-61 240.0 640 34.1
Nitab4.5_0011633g0010 Nicotiana tabacum HOM05D004018 ORTHO05D004408 8.3e-61 239.2 601 34.8
MSTRG.12568 Avicennia marina HOM05D004018 ORTHO05D004408 1.1e-60 238.8 657 33.3
Carub.0006s3419 Capsella rubella HOM05D004018 ORTHO05D004408 1.4e-60 238.4 636 34.1
Thhalv10007330m.g Eutrema salsugineum HOM05D004018 ORTHO05D004408 1.4e-60 238.4 612 34.3
Cfa006111 Carpinus fangiana HOM05D004018 ORTHO05D004408 1.9e-60 238.0 648 34.0
Solyc09g064860.3 Solanum lycopersicum HOM05D004018 ORTHO05D004408 1.9e-60 238.0 607 34.8
Ciclev10018884m.g Citrus clementina HOM05D004018 ORTHO05D004408 2.4e-60 237.7 330 46.1
Sp1g02290 Schrenkiella parvula HOM05D004018 ORTHO05D004408 2.4e-60 237.7 627 33.0
Atru.chr5.1370 Acer truncatum HOM05D004018 ORTHO05D004408 5.4e-60 236.5 631 33.3
Gohir.D12G005400 Gossypium hirsutum HOM05D004018 ORTHO05D004408 7.0e-60 236.1 626 34.0
Rhsim13G0022700 Rhododendron simsii HOM05D000644 ORTHO05D004408 7.0e-60 236.1 648 34.9
Ca_09771_v3 Cicer arietinum L. HOM05D004018 ORTHO05D004408 9.2e-60 235.7 644 32.9
SalBow4G1908 Salvia bowleyana HOM05D004018 ORTHO05D004408 9.2e-60 235.7 557 36.4
vmacro02552 Vaccinium macrocarpon HOM05D004018 ORTHO05D004408 1.2e-59 235.3 678 31.9
Peaxi162Scf00570g00314 Petunia axillaris HOM05D004018 ORTHO05D004408 1.6e-59 235.0 651 33.0
Potri.014G139000 Populus trichocarpa HOM05D004018 ORTHO05D004408 1.6e-59 235.0 606 33.8
Aqoxy2G03257 Aquilegia oxysepala HOM05D004018 ORTHO05D004408 2.0e-59 234.6 631 33.0
CSS0042185 Camellia sinensis var. sinensis HOM05D004018 ORTHO05D004408 2.7e-59 234.2 334 47.3
COL.COLO4_09133 Corchorus olitorius HOM05D004018 ORTHO05D004408 4.6e-59 233.4 637 33.8
Actinidia00738 Actinidia chinensis HOM05D004018 ORTHO05D004408 6.0e-59 233.0 265 52.5
CARHR002590 Cardamine hirsuta HOM05D004018 ORTHO05D004408 6.0e-59 233.0 616 33.9
Duzib133G0055 Durio zibethinus HOM05D004018 ORTHO05D004408 1.3e-58 231.9 643 31.4
AT1G03290 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 1.7e-58 231.5 560 35.4
ECA248G1820 Erigeron canadensis HOM05D004018 ORTHO05D004408 8.6e-58 229.2 629 33.2
THA.LOC104801219 Tarenaya hassleriana HOM05D004018 ORTHO05D004408 1.1e-57 228.8 599 34.1
CARHR251270 Cardamine hirsuta HOM05D004018 ORTHO05D004408 1.5e-57 228.4 626 35.0
Manes.01G209500 Manihot esculenta HOM05D004018 ORTHO05D004408 1.5e-57 228.4 646 32.0
FAN20G3038 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.5e-57 227.6 631 31.7
AL6G50040 Arabidopsis lyrata HOM05D004018 ORTHO05D004408 4.3e-57 226.9 619 33.6
Cc01_g19730 Coffea canephora HOM05D004018 ORTHO05D004408 5.6e-57 226.5 643 34.1
TAR636G0803 Trochodendron aralioides HOM05D004018 ORTHO05D004408 2.8e-56 224.2 610 34.3
BcaC05g24644 Brassica carinata HOM05D004018 ORTHO05D004408 3.6e-56 223.8 312 46.2
Oeu047882.1 Olea europaea HOM05D004018 ORTHO05D004408 3.6e-56 223.8 616 32.3
Phvul.007G169800 Phaseolus vulgaris HOM05D004018 ORTHO05D004408 3.6e-56 223.8 641 32.9
Sp6g02920 Schrenkiella parvula HOM05D004018 ORTHO05D004408 3.6e-56 223.8 606 33.2
DCAR_018413 Daucus carota HOM05D004018 ORTHO05D004408 1.1e-55 222.2 575 35.3
Eucgr.H01516 Eucalyptus grandis HOM05D004018 ORTHO05D004408 1.4e-55 221.9 663 32.6
Glyma.10G025000 Glycine max HOM05D004018 ORTHO05D004408 1.8e-55 221.5 335 45.1
SalBow6G7233 Salvia bowleyana HOM05D004018 ORTHO05D004408 1.8e-55 221.5 636 31.9
arahy.Tifrunner.gnm1.ann1.6Q7DFN Arachis hypogaea HOM05D004018 ORTHO05D004408 2.3e-55 221.1 577 33.1
MD11G1289200 Malus domestica HOM05D004018 ORTHO05D004408 2.3e-55 221.1 328 46.6
Carub.0001s0240 Capsella rubella HOM05D004018 ORTHO05D004408 6.8e-55 219.5 604 33.9
Prupe.8G244100 Prunus persica HOM05D004018 ORTHO05D004408 8.9e-55 219.2 627 33.0
QL12p022414 Quercus lobata HOM05D004018 ORTHO05D004408 8.9e-55 219.2 566 34.6
FAN27G0494 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.0e-54 218.0 645 32.2
MD03G1268400 Malus domestica HOM05D004018 ORTHO05D004408 2.0e-54 218.0 301 47.5
Aa31LG1G9250 Aethionema arabicum HOM05D004018 ORTHO05D004408 2.6e-54 217.6 530 34.2
RcHm_v2.0_Chr6g0291481 Rosa chinensis HOM05D004018 ORTHO05D004408 5.8e-54 216.5 620 31.9
arahy.Tifrunner.gnm1.ann1.BX9H6P Arachis hypogaea HOM05D004018 ORTHO05D004408 7.5e-54 216.1 577 32.9
AT4G02880 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 9.8e-54 215.7 619 33.0
FAN24G0467 Fragaria x ananassa HOM05D000644 ORTHO05D004408 9.8e-54 215.7 652 31.6
VMungo0720G2698 Vigna mungo HOM05D004018 ORTHO05D004408 9.8e-54 215.7 642 32.9
Glyma.02G148900 Glycine max HOM05D004018 ORTHO05D004408 1.3e-53 215.3 582 34.2
C05p01820 Brassica napus HOM05D003188 ORTHO05D003602 2.9e-53 214.2 332 44.6
C02p39650 Brassica napus HOM05D004018 ORTHO05D004408 3.7e-53 213.8 316 45.9
Psat6g061120 Pisum sativum HOM05D004018 ORTHO05D004408 4.9e-53 213.4 608 32.9
Hund28856 Selenicereus undatus HOM05D004018 ORTHO05D004408 4.9e-53 213.4 287 48.4
Hund28858 Selenicereus undatus HOM05D004018 ORTHO05D004408 4.9e-53 213.4 287 48.4
TPR.G1562 Trifolium pratense HOM05D004018 ORTHO05D004408 4.9e-53 213.4 629 31.3
Hma1.2p1_0628F.1_g191955 Hydrangea macrophylla HOM05D004018 ORTHO05D004408 6.4e-53 213.0 671 32.5
TWI14G0752 Tripterygium wilfordii HOM05D004018 ORTHO05D004408 6.4e-53 213.0 630 32.7
BcaC03g16187 Brassica carinata HOM05D004018 ORTHO05D004408 8.3e-53 212.6 317 46.1
Haze_04739 Corylus avellana HOM05D004018 ORTHO05D004408 1.1e-52 212.2 674 30.4
FvH4_2g23870 Fragaria vesca HOM05D004018 ORTHO05D004408 1.1e-52 212.2 651 31.3
Sed0023986 Sechium edule HOM05D004018 ORTHO05D004408 1.1e-52 212.2 654 31.5
BcaC05g24546 Brassica carinata HOM05D004018 ORTHO05D004408 1.4e-52 211.8 190 61.1
Cpa.g.sc837.2 Carica papaya HOM05D004018 ORTHO05D004408 2.4e-52 211.1 283 48.8
Zm00001eb349530 Zea mays HOM05D004018 ORTHO05D004408 2.4e-52 211.1 629 32.8
A02p25020 Brassica napus HOM05D004018 ORTHO05D004408 3.2e-52 210.7 317 45.4
BraA02t07491Z Brassica rapa HOM05D004018 ORTHO05D004408 3.2e-52 210.7 317 45.4
DCAR_002748 Daucus carota HOM05D004018 ORTHO05D004408 7.1e-52 209.5 630 32.5
BraA10t42458Z Brassica rapa HOM05D004018 ORTHO05D004408 9.2e-52 209.1 314 45.9
ClCG09G006910 Citrullus lanatus HOM05D004018 ORTHO05D004408 9.2e-52 209.1 573 31.9
Gohir.D08G203601 Gossypium hirsutum HOM05D004018 ORTHO05D004408 1.2e-51 208.8 294 49.0
Eucgr.K03388 Eucalyptus grandis HOM05D004018 ORTHO05D004408 2.1e-51 208.0 636 31.6
MSTRG.18219 Avicennia marina HOM05D004018 ORTHO05D004408 2.7e-51 207.6 321 43.9
Lj2A1177T38 Lonicera japonica HOM05D004018 ORTHO05D004408 2.7e-51 207.6 317 43.5
Thhalv10028568m.g Eutrema salsugineum HOM05D004018 ORTHO05D004408 4.6e-51 206.8 617 32.4
Medtr1g072560 Medicago truncatula HOM05D004018 ORTHO05D004408 4.6e-51 206.8 623 32.3
CiPaw.08G103600 Carya illinoinensis HOM05D004018 ORTHO05D004408 1.0e-50 205.7 191 59.2
PGR044G1283 Punica granatum HOM05D004018 ORTHO05D004408 1.7e-50 204.9 626 32.6
MELO3C015856.2 Cucumis melo HOM05D004018 ORTHO05D004408 2.3e-50 204.5 656 30.9
HanXRQChr01g0002351 Helianthus annuus HOM05D004018 ORTHO05D004408 3.9e-50 203.8 530 35.1
Lalb_Chr21g0306531 Lupinus albus HOM05D004018 ORTHO05D004408 5.1e-50 203.4 619 33.6
TAR362G1233 Trochodendron aralioides HOM05D004018 ORTHO05D004408 6.6e-50 203.0 519 35.8
BolC5t28960H Brassica oleracea HOM05D003188 ORTHO05D003602 8.6e-50 202.6 632 30.5
Zm00001eb287880 Zea mays HOM05D004018 ORTHO05D004408 2.5e-49 201.1 304 42.4
Migut.D00269 Erythranthe guttata HOM05D004018 ORTHO05D004408 9.5e-49 199.1 545 32.3
AUR62036814 Chenopodium quinoa HOM05D004018 ORTHO05D004408 2.1e-48 198.0 663 30.0
Migut.N02157 Erythranthe guttata HOM05D004018 ORTHO05D004408 2.1e-48 198.0 600 33.8
HPP92_003154 Vanilla planifolia HOM05D004018 ORTHO05D004408 2.1e-48 198.0 575 32.0
FAN15G3429 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.8e-48 197.6 636 31.0
Lalb_Chr02g0142861 Lupinus albus HOM05D004018 ORTHO05D004408 2.8e-48 197.6 640 31.2
CiPaw.07G093900 Carya illinoinensis HOM05D004018 ORTHO05D004408 6.2e-48 196.4 574 34.1
Sed0026091 Sechium edule HOM05D004018 ORTHO05D004408 6.8e-47 193.0 627 30.3
AUR62033708 Chenopodium quinoa HOM05D004018 ORTHO05D004408 1.2e-46 192.2 672 29.8
HanXRQChr11g0327641 Helianthus annuus HOM05D004018 ORTHO05D004408 3.4e-46 190.7 552 33.3
BolC2t09981H Brassica oleracea HOM05D004018 ORTHO05D004408 1.3e-45 188.7 317 44.5
A10p01840 Brassica napus HOM05D003188 ORTHO05D003602 6.4e-45 186.4 329 42.6
Pp3c15_12690 Physcomitrium patens HOM05D004018 ORTHO05D004408 2.4e-44 184.5 360 36.4
BraA03t12255Z Brassica rapa HOM05D004018 ORTHO05D004408 3.2e-44 184.1 612 32.4
Sc24g0004120 Simmondsia chinensis HOM05D004018 ORTHO05D004408 4.1e-44 183.7 477 33.5
BolC3t16038H Brassica oleracea HOM05D004018 ORTHO05D004408 1.2e-43 182.2 610 33.0
A03p30760 Brassica napus HOM05D004018 ORTHO05D004408 7.8e-43 179.5 604 32.3
CsaV3_7G028620 Cucumis sativus L. HOM05D004018 ORTHO05D004408 5.1e-42 176.8 628 29.6
CDE05G3031 Ceratophyllum demersum HOM05D004018 ORTHO05D004408 8.6e-42 176.0 589 29.5
TWI59G1189 Tripterygium wilfordii HOM05D004018 ORTHO05D004408 1.5e-41 175.3 637 30.0
MBI17_g12005_MAGBIO Magnolia biondii HOM05D004018 ORTHO05D004408 1.9e-41 174.9 618 29.4
C03p37460 Brassica napus HOM05D004018 ORTHO05D004408 4.3e-41 173.7 338 40.2
SGA_v2.0_scaffold258G45767 Striga asiatica HOM05D004018 ORTHO05D004408 9.6e-41 172.6 683 28.4
DCAR_012464 Daucus carota HOM05D000644 ORTHO05D000504 4.7e-40 170.2 566 30.2
Lj5g0010123 Lotus japonicus HOM05D004018 ORTHO05D004408 4.7e-40 170.2 653 30.2
Os10g0315400 Oryza sativa ssp. japonica HOM05D004018 ORTHO05D004408 1.8e-39 168.3 289 41.5
Mapoly0005s0053 Marchantia polymorpha HOM05D004018 ORTHO05D004408 1.3e-37 162.2 266 39.1
EL10Ac7g17209 Beta vulgaris HOM05D004018 ORTHO05D004408 8.4e-37 159.5 570 29.6
Lsat_1_v5_gn_5_187400 Lactuca sativa HOM05D004018 ORTHO05D004408 5.4e-36 156.8 511 31.3
Atru.chr12.487 Acer truncatum HOM05D004018 ORTHO05D004408 9.3e-36 156.0 168 57.1
Atru.chr12.465 Acer truncatum HOM05D004018 ORTHO05D004408 1.6e-35 155.2 168 57.1
Pp3c9_12210 Physcomitrium patens HOM05D004018 ORTHO05D004408 2.7e-35 154.5 511 27.4
Sabra14G0104800 Salix brachista HOM05D004018 ORTHO05D004408 2.1e-32 144.8 420 32.6
ECA236G3018 Erigeron canadensis HOM05D004018 ORTHO05D004408 1.2e-30 139.0 231 38.5
Dinv11250 Davidia involucrata HOM05D004018 ORTHO05D004408 1.5e-30 138.7 460 30.4
Sabra02G0167700 Salix brachista HOM05D004018 ORTHO05D004408 1.7e-29 135.2 443 30.5
CARHR005950 Cardamine hirsuta HOM05D004018 ORTHO05D004408 2.2e-29 134.8 335 37.3
HanXRQChr04g0118801 Helianthus annuus HOM05D004018 ORTHO05D004408 3.2e-28 131.0 274 36.5
SMO364G0006 Selaginella moellendorffii HOM05D004018 ORTHO05D004408 3.6e-24 117.5 340 30.0
ECA236G2305 Erigeron canadensis HOM05D004018 ORTHO05D004408 2.0e-22 111.7 204 38.7
SGA_v2.0_scaffold11G05799 Striga asiatica HOM05D004018 ORTHO05D004408 1.7e-21 108.6 607 23.7
Ah.08g213040 Amaranthus hybridus HOM05D004018 ORTHO05D004408 2.4e-20 104.8 122 50.8
Dinv11249 Davidia involucrata HOM05D004018 ORTHO05D004408 5.5e-20 103.6 190 43.7
BcaC03g15959 Brassica carinata HOM05D004018 ORTHO05D004408 9.3e-20 102.8 168 42.9
unitig_0.g1008 Utricularia gibba HOM05D004018 ORTHO05D004408 2.1e-19 101.7 537 26.3
AagrBONN_evm.TU.Sc2ySwM_228.3859 Anthoceros agrestis HOM05D004018 ORTHO05D004408 2.7e-19 101.3 488 26.4
HanXRQChr03g0063801 Helianthus annuus HOM05D004018 ORTHO05D004408 3.9e-18 97.4 189 38.1
C02p37230 Brassica napus HOM05D004018 ORTHO05D004408 4.0e-15 87.4 91 50.5
MD11G1124600 Malus domestica HOM05D004018 ORTHO05D004408 4.0e-15 87.4 81 56.8
BolC2t09733H Brassica oleracea HOM05D004018 ORTHO05D004408 4.5e-14 84.0 57 68.4
CBR_g40749 Chara braunii HOM05D004018 ORTHO05D004408 1.0e-13 82.8 266 28.9
MBI05_g27108_MAGBIO Magnolia biondii HOM05D004018 ORTHO05D004408 3.8e-13 80.9 76 57.9
ECA247G3795 Erigeron canadensis HOM05D004018 ORTHO05D004408 8.4e-13 79.7 194 33.5
SEGI_03888 Sequoiadendron giganteum HOM05D004018 ORTHO05D004408 7.1e-12 76.6 198 31.8
ECA236G2562 Erigeron canadensis HOM05D004018 ORTHO05D004408 2.1e-11 75.1 256 28.9
HanXRQChr03g0063751 Helianthus annuus HOM05D004018 ORTHO05D004408 2.1e-11 75.1 207 34.8
HanXRQChr03g0063771 Helianthus annuus HOM05D004018 ORTHO05D004408 1.1e-09 69.3 175 33.1
Os05g0394900 Oryza sativa ssp. japonica HOM05D004018 ORTHO05D004408 1.9e-09 68.6 97 45.4
MBI08_g05535_MAGBIO Magnolia biondii HOM05D001851 ORTHO05D004408 1.0e-05 56.2 90 42.2


User provided reference genes

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