Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 8.6e-75 283.5 136 100.0
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 1.6e-44 183.0 130 65.4
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 1.6e-44 183.0 127 66.9
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 3.5e-44 181.8 136 64.0
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 6.0e-44 181.0 129 66.7
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 6.0e-44 181.0 130 65.4
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 6.0e-44 181.0 124 65.3
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 7.9e-44 180.6 111 72.1
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 1.3e-43 179.9 130 65.4
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 1.8e-43 179.5 128 63.3
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 2.3e-43 179.1 128 68.0
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 3.0e-43 178.7 132 64.4
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 3.0e-43 178.7 110 70.0
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 3.9e-43 178.3 128 64.8
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 5.1e-43 177.9 134 61.2
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 5.1e-43 177.9 110 68.2
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 5.1e-43 177.9 110 68.2
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 6.7e-43 177.6 135 63.0
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 6.7e-43 177.6 128 64.1
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 1.1e-42 176.8 114 70.2
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.1e-42 176.8 129 62.8
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 1.1e-42 176.8 128 62.5
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.5e-42 176.4 133 66.2
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 1.9e-42 176.0 128 63.3
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 1.9e-42 176.0 107 73.8
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 2.5e-42 175.6 105 71.4
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 3.3e-42 175.3 115 67.8
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 3.3e-42 175.3 131 63.4
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 4.3e-42 174.9 125 59.2
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 5.6e-42 174.5 108 70.4
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 5.6e-42 174.5 135 62.2
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 7.4e-42 174.1 131 61.8
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 7.4e-42 174.1 132 64.4
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 7.4e-42 174.1 129 62.8
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 1.3e-41 173.3 130 62.3
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 1.3e-41 173.3 104 75.0
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.6e-41 172.9 110 64.5
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.1e-41 172.6 135 60.7
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 2.1e-41 172.6 132 61.4
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 2.1e-41 172.6 135 61.5
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 2.8e-41 172.2 129 63.6
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 2.8e-41 172.2 133 63.2
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 3.7e-41 171.8 130 61.5
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 3.7e-41 171.8 134 61.9
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.7e-41 171.8 135 60.7
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 4.8e-41 171.4 131 61.1
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.8e-41 171.4 131 60.3
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.8e-41 171.4 131 60.3
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 4.8e-41 171.4 129 57.4
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 6.2e-41 171.0 152 56.6
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 6.2e-41 171.0 108 67.6
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 6.2e-41 171.0 134 61.2
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 8.1e-41 170.6 130 59.2
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 8.1e-41 170.6 129 62.8
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 1.1e-40 170.2 132 62.9
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 1.1e-40 170.2 132 62.1
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 1.4e-40 169.9 130 60.8
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 1.4e-40 169.9 134 59.7
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 1.4e-40 169.9 128 61.7
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 1.4e-40 169.9 132 61.4
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 1.8e-40 169.5 105 71.4
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.8e-40 169.5 105 71.4
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.4e-40 169.1 128 60.2
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 2.4e-40 169.1 132 62.1
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 3.1e-40 168.7 126 57.9
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.2e-39 166.8 113 66.4
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.5e-39 166.4 134 56.7
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 3.4e-39 165.2 132 60.6
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 4.5e-39 164.9 106 67.0
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 4.5e-39 164.9 105 66.7
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 5.8e-39 164.5 106 67.0
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 5.8e-39 164.5 107 67.3
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 9.9e-39 163.7 128 61.7
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 9.9e-39 163.7 133 59.4
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 9.9e-39 163.7 104 68.3
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 1.3e-38 163.3 132 59.8
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 1.3e-38 163.3 132 59.8
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 1.3e-38 163.3 105 67.6
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 1.3e-38 163.3 105 67.6
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 3.8e-38 161.8 132 59.1
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 4.9e-38 161.4 137 59.9
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 6.4e-38 161.0 130 57.7
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 8.4e-38 160.6 129 56.6
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 1.1e-37 160.2 105 67.6
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 1.4e-37 159.8 129 57.4
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 1.9e-37 159.5 133 60.2
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 1.9e-37 159.5 132 59.1
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 2.4e-37 159.1 135 58.5
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 2.4e-37 159.1 129 59.7
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 3.2e-37 158.7 137 58.4
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 4.2e-37 158.3 111 64.0
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 5.5e-37 157.9 129 56.6
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 7.1e-37 157.5 105 63.8
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 9.3e-37 157.1 135 58.5
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 9.3e-37 157.1 134 56.0
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 1.2e-36 156.8 132 56.8
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.2e-36 156.8 110 61.8
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 2.7e-36 155.6 132 56.8
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 2.7e-36 155.6 132 56.8
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 2.7e-36 155.6 135 57.8
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.7e-36 155.6 110 61.8
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 3.5e-36 155.2 132 56.8
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 7.9e-36 154.1 110 59.1
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 7.9e-36 154.1 107 65.4
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 1.3e-35 153.3 103 66.0
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.3e-35 153.3 133 56.4
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.1e-34 150.2 118 65.3
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 2.5e-34 149.1 112 60.7
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 2.5e-34 149.1 131 53.4
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.3e-33 146.7 103 64.1
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 1.3e-33 146.7 109 60.6
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 2.1e-33 146.0 106 59.4
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 1.4e-32 143.3 103 61.2
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.4e-32 143.3 103 61.2
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.8e-32 142.9 103 61.2
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.4e-32 142.5 105 57.1
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 3.1e-32 142.1 102 61.8
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 4.0e-32 141.7 104 56.7
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 5.3e-32 141.4 103 61.2
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.0e-31 139.4 129 51.2
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 1.1e-29 133.7 86 69.8
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 4.2e-29 131.7 83 68.7
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.3e-27 126.7 129 48.1
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.4e-24 116.7 69 72.5
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 2.4e-24 115.9 74 67.6
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.4e-24 115.9 70 68.6
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 1.2e-23 113.6 126 42.9
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 3.0e-19 99.0 98 50.0
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.5e-15 86.7 71 52.1
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.4e-13 80.1 104 39.4
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 5.1e-11 71.6 44 68.2
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 1.8e-08 63.2 58 51.7


User provided reference genes

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