Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 5.6e-150 534.6 355 100.0
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 1.1e-105 387.5 355 76.3
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 4.2e-105 385.6 355 62.0
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 9.7e-102 374.4 355 76.3
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 5.3e-100 368.6 355 72.4
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 1.0e-98 364.4 355 53.8
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 2.2e-98 363.2 354 51.7
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 3.8e-98 362.5 355 52.7
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 8.5e-98 361.3 355 52.7
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 4.2e-97 359.0 355 71.8
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 1.6e-96 357.1 355 52.7
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 2.7e-96 356.3 232 73.3
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.6e-96 355.9 355 52.1
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 4.7e-96 355.5 356 60.7
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 6.1e-96 355.1 356 52.0
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 6.1e-96 355.1 356 52.0
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 6.1e-96 355.1 356 52.0
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 6.1e-96 355.1 354 70.6
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 6.1e-96 355.1 355 51.8
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 1.0e-95 354.4 355 52.4
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 1.4e-95 354.0 232 72.8
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 3.0e-95 352.8 354 50.0
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 5.1e-95 352.1 232 72.4
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 8.8e-95 351.3 232 72.0
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 8.8e-95 351.3 355 51.5
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 1.1e-94 350.9 232 72.0
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 2.0e-94 350.1 233 71.2
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 2.6e-94 349.7 355 50.7
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 4.4e-94 349.0 232 70.3
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 5.7e-94 348.6 232 71.6
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 1.3e-93 347.4 233 71.7
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 1.7e-93 347.1 355 51.3
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 2.2e-93 346.7 232 71.6
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 2.2e-93 346.7 354 71.2
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 2.8e-93 346.3 353 59.5
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 3.7e-93 345.9 232 70.7
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 3.7e-93 345.9 230 71.3
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 3.7e-93 345.9 230 71.7
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 3.7e-93 345.9 232 71.1
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 4.8e-93 345.5 355 66.8
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 6.3e-93 345.1 232 70.3
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 6.3e-93 345.1 355 56.3
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 1.4e-92 344.0 355 50.4
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 1.4e-92 344.0 234 70.1
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 1.4e-92 344.0 221 75.1
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 1.8e-92 343.6 232 70.7
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 1.5e-91 340.5 232 70.3
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 4.5e-91 339.0 233 69.5
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 4.5e-91 339.0 233 69.5
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 4.5e-91 339.0 234 69.2
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 4.5e-91 339.0 356 50.8
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 7.7e-91 338.2 230 70.9
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 1.3e-90 337.4 355 49.6
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 2.2e-90 336.7 233 67.8
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 2.2e-90 336.7 232 67.2
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 2.9e-90 336.3 355 48.7
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 1.9e-89 333.6 355 47.6
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 2.5e-89 333.2 355 48.5
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 7.2e-89 331.6 233 66.1
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 2.1e-88 330.1 355 47.9
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 3.6e-88 329.3 232 68.1
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 8.0e-88 328.2 232 65.1
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 1.8e-87 327.0 234 66.7
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 2.3e-87 326.6 355 47.0
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 6.7e-87 325.1 355 46.5
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 6.7e-87 325.1 234 66.7
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 8.8e-87 324.7 232 65.5
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 1.1e-86 324.3 355 46.8
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 2.6e-86 323.2 232 64.2
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 2.6e-86 323.2 234 67.1
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 1.3e-85 320.9 352 46.9
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 1.3e-85 320.9 214 71.5
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 2.2e-85 320.1 355 70.1
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 4.8e-85 318.9 335 50.7
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 8.2e-85 318.2 355 46.8
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 4.1e-84 315.8 229 64.6
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.6e-83 313.9 233 65.2
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 7.7e-83 311.6 355 45.4
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 5.0e-82 308.9 214 67.3
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 1.1e-81 307.8 355 45.1
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 1.1e-81 307.8 355 45.1
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 1.1e-81 307.8 347 46.4
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 5.5e-81 305.4 355 44.5
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 5.5e-81 305.4 355 44.8
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 7.2e-81 305.1 237 63.3
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 3.6e-80 302.8 233 62.2
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 1.8e-79 300.4 183 76.5
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 6.8e-79 298.5 208 66.8
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 2.0e-78 297.0 232 62.5
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 7.5e-78 295.0 234 61.1
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 3.1e-76 289.7 210 66.2
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.7e-75 286.6 232 62.9
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 1.0e-74 284.6 355 42.0
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 6.5e-74 282.0 232 59.5
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 1.9e-73 280.4 232 60.3
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 2.5e-73 280.0 237 59.5
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 5.5e-73 278.9 205 66.8
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 7.2e-73 278.5 234 59.4
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 2.1e-72 276.9 395 43.0
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 2.0e-70 270.4 233 59.2
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 2.6e-62 243.4 234 56.0
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 5.4e-52 209.1 230 50.9
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 4.1e-44 183.0 175 50.9
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 3.9e-42 176.4 199 46.7
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 1.4e-39 167.9 167 50.3
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 3.5e-35 153.3 173 47.4
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 3.3e-33 146.7 207 42.0
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 3.1e-31 140.2 217 65.9
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 1.1e-20 105.1 183 36.6
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 7.3e-17 92.4 174 34.5
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 1.3e-16 91.7 217 32.3
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 4.8e-16 89.7 127 43.3
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 1.4e-15 88.2 203 32.0
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 2.6e-14 84.0 219 32.4
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 1.7e-13 81.3 193 33.2
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 6.4e-13 79.3 196 30.6
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 6.4e-13 79.3 199 30.7
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 1.9e-12 77.8 186 30.6
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 2.4e-12 77.4 202 31.7
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 3.2e-12 77.0 201 30.3
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 9.3e-12 75.5 193 31.1
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 9.3e-12 75.5 185 30.8
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 1.2e-11 75.1 201 30.3
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 3.5e-11 73.6 187 29.9
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 4.6e-11 73.2 195 29.2
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 7.9e-11 72.4 202 28.2
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 1.3e-10 71.6 206 29.6
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 1.8e-10 71.2 187 33.2
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 3.0e-10 70.5 205 26.3
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 3.0e-10 70.5 205 26.3
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 3.0e-10 70.5 205 30.2
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 3.0e-10 70.5 201 29.9
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 3.9e-10 70.1 202 27.7
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 3.9e-10 70.1 185 29.7
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 5.1e-10 69.7 207 28.5
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 5.1e-10 69.7 190 31.1
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 6.7e-10 69.3 154 31.8
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 8.7e-10 68.9 191 29.8
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 8.7e-10 68.9 194 29.4
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 1.1e-09 68.6 191 29.8
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 1.9e-09 67.8 195 27.7
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 7.4e-09 65.9 194 27.3
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 1.3e-08 65.1 161 30.4
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 1.3e-08 65.1 204 28.4
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 1.6e-08 64.7 162 30.2
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 1.6e-08 64.7 165 30.3
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 1.6e-08 64.7 157 31.2
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 2.8e-08 63.9 193 30.1
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 8.1e-08 62.4 192 29.2
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 8.1e-08 62.4 157 30.6
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 1.1e-07 62.0 203 28.6
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 1.8e-07 61.2 203 26.1
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 5.3e-07 59.7 157 29.9
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 1.2e-06 58.5 168 31.0
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 1.2e-06 58.5 153 30.1
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 1.5e-06 58.2 47 48.9


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