Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 0.0e+00 1100.9 700 100.0
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 4.0e-67 260.4 378 40.7
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 5.2e-67 260.0 381 40.7
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 6.4e-65 253.1 376 39.1
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 1.9e-64 251.5 378 39.2
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 1.9e-64 251.5 366 40.2
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 4.2e-64 250.4 374 40.4
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 1.2e-63 248.8 377 38.7
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 2.7e-63 247.7 393 37.9
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 6.0e-63 246.5 349 40.4
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 1.0e-62 245.7 371 38.5
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 3.0e-62 244.2 370 38.9
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.1e-61 242.3 368 39.9
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.1e-61 242.3 393 37.2
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 2.5e-61 241.1 389 36.8
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 5.6e-61 240.0 368 40.8
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 9.6e-61 239.2 320 42.5
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 9.6e-61 239.2 368 39.9
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-60 238.4 367 40.3
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.8e-60 237.7 368 39.7
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.8e-60 236.9 370 39.5
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 4.8e-60 236.9 368 37.5
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 6.2e-60 236.5 324 38.9
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 6.2e-60 236.5 384 37.0
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.1e-59 235.7 375 38.1
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 4.0e-59 233.8 375 37.6
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 4.0e-59 233.8 373 37.8
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 4.0e-59 233.8 389 36.5
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 6.9e-59 233.0 366 38.8
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 2.6e-58 231.1 370 37.8
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 3.4e-58 230.7 381 36.2
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 7.6e-58 229.6 375 37.3
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 7.6e-58 229.6 362 37.3
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 7.6e-58 229.6 375 38.1
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 3.8e-57 227.3 384 36.5
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 4.9e-57 226.9 366 37.2
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 6.4e-57 226.5 373 35.7
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.4e-56 225.3 371 37.5
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 1.4e-56 225.3 365 35.6
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.4e-56 224.6 353 39.4
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 2.4e-56 224.6 379 34.8
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 5.4e-56 223.4 386 37.3
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 7.1e-56 223.0 364 37.9
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.7e-55 221.1 360 36.9
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 2.7e-55 221.1 367 36.2
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 3.5e-55 220.7 372 34.7
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 6.0e-55 219.9 372 36.0
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 7.9e-55 219.5 321 37.1
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 1.3e-54 218.8 374 36.6
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 1.8e-54 218.4 387 35.4
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 2.3e-54 218.0 320 39.4
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 2.3e-54 218.0 371 36.9
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 3.0e-54 217.6 375 36.8
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 3.9e-54 217.2 366 37.2
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 5.1e-54 216.9 374 36.1
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 8.7e-54 216.1 386 35.2
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.1e-53 215.7 384 37.0
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.5e-53 215.3 356 37.9
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 1.9e-53 214.9 329 37.7
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 3.3e-53 214.2 368 38.3
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 5.6e-53 213.4 371 35.0
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.3e-52 212.2 368 36.7
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.3e-52 212.2 374 33.7
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 2.1e-52 211.5 373 36.5
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 2.8e-52 211.1 371 37.5
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 3.7e-52 210.7 331 37.2
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 3.7e-52 210.7 375 35.2
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 3.7e-52 210.7 375 34.4
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 4.8e-52 210.3 374 33.7
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 4.8e-52 210.3 363 35.5
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 6.2e-52 209.9 373 35.4
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 8.1e-52 209.5 374 33.2
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 1.4e-51 208.8 323 37.8
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.4e-51 208.8 386 34.5
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 5.3e-51 206.8 383 34.5
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 6.9e-51 206.5 367 37.1
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 9.0e-51 206.1 336 38.4
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 7.6e-50 203.0 369 34.4
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 4.9e-49 200.3 364 34.1
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.1e-48 199.1 369 35.5
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.2e-48 197.6 325 36.3
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 1.2e-47 195.7 381 33.9
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 4.6e-47 193.7 372 35.2
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 7.9e-47 193.0 346 34.7
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 1.8e-46 191.8 323 37.8
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.8e-46 191.8 323 38.1
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 3.3e-45 187.6 320 33.1
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 1.3e-44 185.7 323 38.1
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 4.8e-44 183.7 333 36.9
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 8.2e-44 183.0 338 34.0
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 8.2e-44 183.0 226 42.5
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.8e-43 181.8 321 34.9
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 2.4e-43 181.4 346 34.4
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 3.1e-43 181.0 361 33.8
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 9.0e-43 179.5 322 34.8
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 1.5e-42 178.7 183 48.1
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 1.5e-42 178.7 322 35.4
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.0e-41 176.0 333 36.0
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 8.4e-41 172.9 347 32.3
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 4.2e-40 170.6 331 34.1
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 4.6e-39 167.2 354 32.2
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.9e-33 147.9 231 36.4
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 3.8e-33 147.5 232 36.6
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 7.2e-32 143.3 376 29.5
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 3.9e-30 137.5 177 42.4
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.5e-29 135.6 226 37.2
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 7.4e-29 133.3 235 35.7
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.1e-19 101.3 263 29.3
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 3.2e-16 91.3 89 48.3
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 3.0e-14 84.7 284 27.5


User provided reference genes

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