Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 0.0e+00 1425.2 710 100.0
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 5.8e-231 804.7 759 57.3
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 1.4e-229 800.0 724 57.2
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 3.9e-219 765.4 741 54.3
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 2.8e-217 759.2 722 54.3
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.8e-217 758.4 739 54.3
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 8.1e-217 757.7 665 60.5
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 5.3e-216 755.0 571 63.7
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 3.4e-215 752.3 717 55.0
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 3.8e-214 748.8 732 53.3
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 8.2e-209 731.1 732 53.6
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.2e-207 727.2 677 56.0
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.0e-206 724.2 608 58.7
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 2.5e-205 719.5 714 52.7
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 7.1e-205 718.0 584 59.6
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 9.3e-205 717.6 718 52.6
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.1e-204 716.5 732 52.3
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 2.1e-204 716.5 573 61.3
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 1.8e-203 713.4 656 56.2
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 3.9e-203 712.2 726 50.8
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.5e-202 710.3 684 53.9
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.5e-202 710.3 726 51.5
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 7.4e-202 708.0 622 57.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 9.6e-202 707.6 715 53.7
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 4.8e-201 705.3 586 59.2
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.4e-200 703.7 588 58.2
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.8e-200 703.4 724 51.4
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 5.3e-200 701.8 573 59.7
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 9.0e-200 701.0 717 51.9
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.9e-199 698.4 588 58.8
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 3.8e-198 695.7 660 53.5
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 8.5e-198 694.5 573 59.3
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 8.5e-198 694.5 583 58.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.9e-197 693.3 619 55.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 7.2e-197 691.4 691 52.7
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 7.2e-197 691.4 657 53.4
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.2e-196 690.6 732 51.1
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.0e-195 687.6 727 51.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.0e-195 687.6 576 59.0
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.8e-195 686.8 722 50.8
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.8e-195 686.8 729 51.0
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 5.1e-195 685.3 585 58.8
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 2.5e-194 682.9 702 51.7
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 5.7e-194 681.8 726 50.4
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 5.7e-194 681.8 574 57.8
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 7.4e-194 681.4 612 58.2
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 9.7e-194 681.0 731 51.0
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 3.7e-193 679.1 633 54.5
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 4.8e-193 678.7 619 57.0
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 2.4e-192 676.4 724 50.4
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 3.1e-192 676.0 601 58.1
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 9.1e-192 674.5 522 62.1
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 2.6e-191 672.9 633 56.4
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 3.4e-191 672.5 699 51.1
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 7.7e-191 671.4 620 55.2
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.7e-190 670.2 633 55.5
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 2.2e-190 669.8 735 50.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.9e-190 669.5 734 48.5
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 6.5e-190 668.3 568 57.7
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.4e-189 667.2 732 49.3
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 6.7e-187 658.3 574 55.2
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 4.4e-186 655.6 615 56.7
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 7.4e-186 654.8 700 49.9
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 2.8e-185 652.9 766 46.6
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.1e-184 651.0 559 58.7
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 9.1e-184 647.9 666 51.7
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.5e-182 641.7 752 47.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.9e-181 640.2 621 53.6
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.7e-180 635.6 552 55.4
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.4e-178 629.0 603 53.7
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.4e-176 624.0 604 54.8
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 4.1e-176 622.5 616 54.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 4.5e-175 619.0 689 47.9
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.0e-174 617.8 609 53.7
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.5e-173 614.0 729 47.3
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.2e-169 600.1 1018 37.9
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.8e-168 597.0 573 52.9
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.0e-167 593.6 574 51.2
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.2e-165 586.3 575 51.0
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 2.0e-162 577.0 666 48.0
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 2.6e-162 576.6 683 44.9
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 3.4e-162 576.2 788 43.5
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.7e-161 573.9 611 50.2
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.8e-161 573.2 615 48.1
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 3.1e-160 569.7 651 46.4
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 2.5e-157 560.1 593 51.4
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 5.5e-157 558.9 611 50.2
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 3.0e-155 553.1 695 46.0
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 2.0e-154 550.4 739 42.6
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.8e-153 546.6 382 68.1
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.6e-151 540.8 650 47.4
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.0e-151 540.4 618 45.6
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 9.5e-149 531.6 714 42.2
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 5.2e-147 525.8 573 50.1
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.0e-142 510.0 664 43.7
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 8.6e-142 508.4 558 49.3
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.4e-136 491.1 640 42.5
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 4.7e-132 476.1 404 60.6
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.1e-128 463.0 540 49.3
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 5.1e-126 456.1 355 61.7
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 2.5e-125 453.8 704 40.3
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.9e-113 413.7 313 63.3
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.9e-113 412.9 597 40.4
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.4e-113 412.5 328 61.3
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.3e-108 398.3 327 58.4
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 6.2e-108 396.0 352 56.0
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.1e-107 395.2 475 44.6
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.6e-106 390.6 265 67.2
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 2.0e-98 364.4 553 40.5
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.3e-94 350.9 556 42.8
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 5.1e-94 349.7 374 47.9
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.3e-92 345.1 499 39.7
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.2e-89 334.3 355 50.7
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 1.1e-88 332.0 444 44.6
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 9.4e-80 302.4 662 32.3
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.7e-76 291.6 303 53.8
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 1.6e-71 275.0 560 32.7
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.2e-68 264.6 489 37.6
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 3.7e-68 263.8 324 48.8
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.0e-62 245.7 153 73.2
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 6.1e-55 219.9 195 56.4
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 5.7e-53 213.4 201 58.7
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 2.8e-52 211.1 282 40.8
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.2e-50 205.7 179 55.9
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 2.1e-47 194.9 283 42.0
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.0e-46 192.6 122 71.3
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 2.3e-46 191.4 278 44.2
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.7e-44 184.1 131 64.9
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.1e-43 180.6 217 42.4
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 2.7e-42 177.9 359 38.4
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.9e-40 171.8 111 67.6
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 3.6e-39 167.5 125 64.0
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 8.9e-38 162.9 327 36.7
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 2.0e-37 161.8 231 42.0
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 6.3e-36 156.8 249 41.4
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 6.6e-33 146.7 334 32.0
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 5.8e-29 133.7 280 32.9
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.7e-26 124.8 116 54.3
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.0e-25 122.9 93 62.4
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 8.0e-23 113.2 75 68.0
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.9e-22 109.8 117 50.4
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-21 109.0 276 33.0
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-20 105.5 85 61.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.9e-20 104.8 95 58.9
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.8e-18 96.7 67 65.7
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.3e-17 95.1 275 29.8
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.1e-17 94.0 85 55.3
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 3.6e-15 87.8 59 64.4
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.8e-14 85.5 59 62.7
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 9.2e-11 73.2 80 45.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 6.2e-07 60.5 45 55.6
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 8.9e-06 56.6 40 65.0
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 8.9e-06 56.6 119 30.3


User provided reference genes

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