Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 7.8e-76 287.0 136 100.0
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 1.5e-39 166.4 107 73.8
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 3.8e-38 161.8 113 72.6
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 9.3e-37 157.1 105 70.5
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 2.7e-36 155.6 102 70.6
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 6.0e-36 154.5 121 66.1
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.0e-35 153.7 100 75.0
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 1.0e-35 153.7 97 76.3
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 3.0e-35 152.1 144 59.0
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 5.1e-35 151.4 98 73.5
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 5.1e-35 151.4 118 66.9
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 8.7e-35 150.6 112 67.0
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 1.1e-34 150.2 131 61.1
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 1.5e-34 149.8 139 57.6
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.5e-34 149.8 121 63.6
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.5e-34 149.8 98 72.4
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 2.5e-34 149.1 97 73.2
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.5e-34 149.1 127 61.4
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 2.5e-34 149.1 97 73.2
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 3.3e-34 148.7 97 72.2
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 3.3e-34 148.7 123 63.4
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 3.3e-34 148.7 102 72.5
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 5.6e-34 147.9 128 61.7
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 7.4e-34 147.5 118 66.1
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 7.4e-34 147.5 126 63.5
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 9.6e-34 147.1 117 65.0
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.3e-33 146.7 117 67.5
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 1.3e-33 146.7 117 67.5
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 1.6e-33 146.4 120 60.8
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 2.1e-33 146.0 125 60.8
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 2.1e-33 146.0 117 66.7
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 2.8e-33 145.6 131 61.8
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 3.7e-33 145.2 116 59.5
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 6.2e-33 144.4 102 69.6
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 6.2e-33 144.4 100 69.0
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 6.2e-33 144.4 122 58.2
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 8.2e-33 144.1 97 70.1
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 8.2e-33 144.1 108 65.7
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 1.1e-32 143.7 97 70.1
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.1e-32 143.7 102 69.6
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 1.1e-32 143.7 96 71.9
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.4e-32 143.3 98 70.4
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.8e-32 142.9 102 66.7
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 1.8e-32 142.9 94 73.4
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 2.4e-32 142.5 94 73.4
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 2.4e-32 142.5 96 69.8
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 3.1e-32 142.1 96 69.8
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 2.0e-31 139.4 89 71.9
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 2.6e-31 139.0 95 70.5
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 4.5e-31 138.3 112 63.4
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 5.8e-31 137.9 90 72.2
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 5.8e-31 137.9 90 72.2
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 5.8e-31 137.9 90 72.2
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 5.8e-31 137.9 90 72.2
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 5.8e-31 137.9 90 72.2
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 2.9e-30 135.6 126 57.1
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 2.9e-30 135.6 90 71.1
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 3.8e-30 135.2 90 71.1
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 3.8e-30 135.2 112 62.5
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 3.8e-30 135.2 111 58.6
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 3.8e-30 135.2 112 58.9
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 4.9e-30 134.8 112 63.4
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 4.9e-30 134.8 112 58.9
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 4.9e-30 134.8 131 54.2
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 4.9e-30 134.8 89 69.7
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 8.4e-30 134.0 104 66.3
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 1.1e-29 133.7 112 61.6
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 1.1e-29 133.7 102 62.7
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 1.4e-29 133.3 128 56.2
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 1.9e-29 132.9 106 64.2
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 2.5e-29 132.5 116 62.1
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 3.2e-29 132.1 108 63.9
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.2e-28 130.2 117 59.8
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 2.7e-28 129.0 132 53.0
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 3.5e-28 128.6 108 63.9
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 5.7e-26 121.3 101 62.4
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 9.7e-26 120.6 111 56.8
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 2.2e-25 119.4 97 67.0
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 1.4e-24 116.7 93 65.6
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 2.2e-22 109.4 75 72.0
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 2.2e-22 109.4 82 67.1
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.8e-22 108.6 131 51.9
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.8e-22 108.6 131 51.9
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 3.2e-21 105.5 85 64.7
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 3.6e-20 102.1 108 53.7
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 2.3e-19 99.4 91 54.9
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 8.8e-19 97.4 66 68.2
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.5e-18 96.7 69 69.6
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 7.4e-18 94.4 113 50.4
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 7.4e-18 94.4 81 55.6
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 1.4e-16 90.1 72 58.3
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 4.1e-16 88.6 100 40.0
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 2.0e-15 86.3 62 71.0
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 2.6e-15 85.9 108 49.1
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 2.6e-15 85.9 94 56.4
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 1.0e-14 84.0 104 43.3
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 6.5e-14 81.3 60 71.7
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 7.2e-13 77.8 98 48.0
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 1.6e-12 76.6 68 58.8
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 2.1e-12 76.3 57 63.2
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 2.1e-12 76.3 94 41.5
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 3.6e-12 75.5 67 59.7
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.6e-12 75.5 121 41.3
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 8.8e-11 70.9 98 42.9
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 2.0e-10 69.7 113 39.8
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 2.4e-08 62.8 115 34.8


User provided reference genes

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