Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.7e-83 312.8 171 100.0
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 8.7e-24 114.4 69 81.2
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 1.5e-23 113.6 74 74.3
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.9e-23 113.2 66 84.8
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 3.3e-23 112.5 154 45.5
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 7.4e-23 111.3 65 84.6
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 2.8e-22 109.4 68 77.9
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 2.8e-22 109.4 70 75.7
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 8.1e-22 107.8 64 79.7
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 8.1e-22 107.8 64 79.7
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 1.1e-21 107.5 63 81.0
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.1e-21 107.5 67 79.1
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.1e-21 107.5 64 81.2
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 1.1e-21 107.5 64 81.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 1.4e-21 107.1 64 81.2
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.8e-21 106.7 168 43.5
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.8e-21 106.7 68 77.9
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 1.8e-21 106.7 177 40.7
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.8e-21 106.7 160 46.2
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.8e-21 106.7 68 80.9
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 1.8e-21 106.7 65 81.5
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.4e-21 106.3 128 50.0
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 3.1e-21 105.9 67 79.1
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 3.1e-21 105.9 65 78.5
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 4.0e-21 105.5 63 82.5
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 6.9e-21 104.8 63 82.5
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 6.9e-21 104.8 64 79.7
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 6.9e-21 104.8 64 79.7
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 6.9e-21 104.8 64 78.1
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 6.9e-21 104.8 64 78.1
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 6.9e-21 104.8 64 78.1
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 9.0e-21 104.4 181 40.9
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 9.0e-21 104.4 171 44.4
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 1.2e-20 104.0 63 79.4
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.2e-20 104.0 65 80.0
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.2e-20 104.0 138 50.7
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.2e-20 104.0 134 48.5
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 2.0e-20 103.2 66 72.7
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 2.0e-20 103.2 162 43.8
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 3.4e-20 102.4 65 76.9
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 3.4e-20 102.4 119 52.1
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 3.4e-20 102.4 63 79.4
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 4.5e-20 102.1 70 74.3
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 7.6e-20 101.3 65 73.8
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.0e-19 100.9 70 70.0
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.7e-19 100.1 68 70.6
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.2e-19 99.8 61 82.0
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 2.9e-19 99.4 67 74.6
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 2.9e-19 99.4 138 45.7
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.9e-19 99.4 66 77.3
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 4.9e-19 98.6 61 80.3
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 6.5e-19 98.2 62 75.8
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 6.5e-19 98.2 65 73.8
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 6.5e-19 98.2 61 78.7
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 6.5e-19 98.2 148 46.6
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 8.4e-19 97.8 166 39.2
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 1.1e-18 97.4 64 76.6
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.1e-18 97.4 61 80.3
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.1e-18 97.4 61 80.3
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 1.4e-18 97.1 68 72.1
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 1.4e-18 97.1 165 42.4
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.9e-18 96.7 137 44.5
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.9e-18 96.7 68 72.1
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 1.9e-18 96.7 66 72.7
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 2.5e-18 96.3 64 76.6
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.5e-18 96.3 61 80.3
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.5e-18 96.3 131 45.0
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 3.2e-18 95.9 68 72.1
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 3.2e-18 95.9 169 43.2
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 3.2e-18 95.9 169 43.2
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 3.2e-18 95.9 175 41.1
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 3.2e-18 95.9 59 79.7
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 4.2e-18 95.5 64 73.4
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 4.2e-18 95.5 64 73.4
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 4.2e-18 95.5 64 73.4
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 4.2e-18 95.5 68 70.6
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 5.5e-18 95.1 113 50.4
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 7.1e-18 94.7 68 70.6
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 7.1e-18 94.7 68 70.6
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 7.1e-18 94.7 66 69.7
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 9.3e-18 94.4 129 43.4
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.2e-17 94.0 168 39.3
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.6e-17 93.6 59 78.0
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.1e-17 93.2 132 45.5
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 2.1e-17 93.2 168 41.7
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 2.1e-17 93.2 66 68.2
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.7e-17 92.8 66 68.2
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.7e-17 92.8 66 68.2
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.7e-17 92.8 66 68.2
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 3.5e-17 92.4 60 78.3
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.5e-17 92.4 60 78.3
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 4.6e-17 92.0 154 41.6
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 4.6e-17 92.0 64 71.9
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 4.6e-17 92.0 61 75.4
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 1.0e-16 90.9 59 76.3
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 8.7e-16 87.8 59 72.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.8e-14 82.8 54 75.9
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 3.7e-14 82.4 59 67.8
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 6.2e-14 81.6 55 70.9
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 1.1e-13 80.9 62 62.9
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 1.8e-13 80.1 71 59.2
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 9.3e-10 67.8 63 50.8
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 2.1e-09 66.6 103 41.7
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 3.5e-09 65.9 55 60.0
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 8.7e-08 61.2 123 36.6


User provided reference genes

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