Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 5.8e-77 290.8 145 100.0
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.4e-46 189.9 147 68.0
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 1.8e-46 189.5 141 67.4
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.0e-45 186.0 144 66.7
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.0e-45 186.0 144 66.7
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 2.0e-45 186.0 142 66.2
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 2.6e-45 185.7 144 66.0
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 5.8e-45 184.5 144 66.7
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 9.9e-45 183.7 141 66.0
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 2.9e-44 182.2 141 63.8
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 8.4e-44 180.6 147 65.3
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 1.4e-43 179.9 148 60.8
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 1.4e-43 179.9 147 62.6
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.9e-43 179.5 129 70.5
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 1.2e-42 176.8 142 60.6
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 1.2e-42 176.8 141 63.8
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 4.6e-42 174.9 143 62.2
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 1.0e-41 173.7 141 61.0
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 1.3e-41 173.3 145 61.4
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.7e-41 172.9 149 61.1
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 3.0e-41 172.2 142 61.3
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 3.0e-41 172.2 142 62.0
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 3.9e-41 171.8 145 62.8
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 6.6e-41 171.0 142 61.3
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 1.1e-40 170.2 142 61.3
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 1.1e-40 170.2 142 62.0
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 2.5e-40 169.1 149 60.4
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 3.3e-40 168.7 143 62.2
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 4.3e-40 168.3 145 59.3
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 4.3e-40 168.3 143 60.8
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 4.3e-40 168.3 143 61.5
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 7.3e-40 167.5 146 58.9
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 9.6e-40 167.2 143 62.2
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 9.6e-40 167.2 143 62.2
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 1.3e-39 166.8 129 65.9
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 1.6e-39 166.4 129 65.9
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 2.8e-39 165.6 143 59.4
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 3.6e-39 165.2 145 59.3
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 3.6e-39 165.2 143 58.7
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 3.6e-39 165.2 129 65.1
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 4.8e-39 164.9 145 62.1
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 4.8e-39 164.9 147 57.1
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 8.1e-39 164.1 142 62.7
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 1.4e-38 163.3 144 58.3
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 1.8e-38 162.9 144 59.7
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 1.8e-38 162.9 141 58.9
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 1.8e-38 162.9 133 62.4
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 2.4e-38 162.5 141 56.7
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 2.4e-38 162.5 144 56.9
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.4e-38 162.5 144 56.9
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.4e-38 162.5 141 57.4
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 2.4e-38 162.5 145 61.4
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 5.3e-38 161.4 143 58.7
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 5.3e-38 161.4 143 58.0
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 6.9e-38 161.0 145 59.3
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 9.0e-38 160.6 144 56.2
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 1.2e-37 160.2 124 63.7
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 2.0e-37 159.5 145 57.2
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 2.6e-37 159.1 141 58.9
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 2.6e-37 159.1 143 56.6
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 4.5e-37 158.3 141 58.9
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 5.8e-37 157.9 144 59.7
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 5.8e-37 157.9 127 63.8
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 5.8e-37 157.9 144 55.6
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 7.6e-37 157.5 144 60.4
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 9.9e-37 157.1 141 58.2
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 9.9e-37 157.1 143 60.1
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 2.2e-36 156.0 129 58.1
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 2.9e-36 155.6 124 64.5
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 4.9e-36 154.8 141 58.2
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 4.9e-36 154.8 145 57.9
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 6.4e-36 154.5 140 59.3
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 6.4e-36 154.5 141 56.7
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 6.4e-36 154.5 146 56.2
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 1.1e-35 153.7 141 54.6
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 1.9e-35 152.9 129 59.7
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 3.2e-35 152.1 142 55.6
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 5.4e-35 151.4 141 57.4
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 5.4e-35 151.4 146 55.5
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 2.1e-34 149.4 143 55.9
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 2.1e-34 149.4 142 55.6
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 3.5e-34 148.7 141 55.3
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 4.6e-34 148.3 141 55.3
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 6.0e-34 147.9 142 57.7
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 6.0e-34 147.9 124 61.3
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 6.0e-34 147.9 132 59.8
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 1.8e-33 146.4 145 55.9
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 2.3e-33 146.0 138 57.2
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 3.9e-33 145.2 141 54.6
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 6.7e-33 144.4 148 55.4
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 1.1e-32 143.7 140 55.0
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.5e-32 143.3 124 62.1
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 1.5e-32 143.3 134 58.2
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 1.5e-32 143.3 145 55.9
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 4.3e-32 141.7 135 54.1
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 7.4e-32 141.0 128 57.0
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 2.1e-31 139.4 129 60.5
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 2.1e-31 139.4 129 60.5
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 2.1e-31 139.4 145 50.3
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 6.2e-31 137.9 132 57.6
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 3.1e-30 135.6 141 50.4
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 6.9e-30 134.4 131 59.5
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 1.5e-29 133.3 132 56.1
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 3.4e-29 132.1 89 75.3
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 4.5e-29 131.7 145 48.3
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 7.6e-29 131.0 133 54.9
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 1.3e-28 130.2 130 57.7
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 2.9e-28 129.0 128 53.1
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 1.1e-27 127.1 130 56.9
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 1.4e-27 126.7 123 58.5
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 1.4e-27 126.7 134 50.0
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 1.9e-27 126.3 117 59.0
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 3.2e-27 125.6 138 50.7
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 7.1e-27 124.4 148 51.4
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 2.7e-26 122.5 127 56.7
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 1.8e-25 119.8 122 51.6
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 7.4e-24 114.4 145 47.6
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 9.6e-24 114.0 147 49.7
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 3.1e-22 109.0 122 50.0
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 4.0e-22 108.6 124 51.6
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.0e-21 106.3 128 50.8
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 1.3e-20 103.6 155 46.5
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 9.3e-19 97.4 91 60.4
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 9.7e-16 87.4 98 53.1
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 4.1e-14 82.0 108 44.4
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 5.3e-14 81.6 100 52.0
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 5.9e-13 78.2 100 50.0
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 7.7e-13 77.8 83 54.2
TAR371G0507 Trochodendron aralioides HOM05D005924 ORTHO05D007290 3.0e-09 65.9 96 39.6
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 5.1e-09 65.1 54 55.6
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 8.8e-09 64.3 108 47.2
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 1.1e-08 63.9 107 36.4
CBR_g27765 Chara braunii HOM05D005924 ORTHO05D007290 3.1e-06 55.8 131 32.8
AagrBONN_evm.TU.Sc2ySwM_340.382 Anthoceros agrestis HOM05D005924 ORTHO05D007290 4.1e-06 55.5 147 32.0


User provided reference genes

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