Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0624G069 Amborella trichopoda HOM05D004038 ORTHO05D004619 9.5e-43 176.4 87 100.0
ATR0115G008 Amborella trichopoda HOM05D004038 ORTHO05D004619 7.1e-22 107.1 65 84.6
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 7.1e-22 107.1 64 84.4
ATR0665G114 Amborella trichopoda HOM05D004038 ORTHO05D004619 4.0e-17 91.3 86 61.6
ATR0225G045 Amborella trichopoda HOM05D004038 ORTHO05D004619 6.4e-15 84.0 52 80.8
ATR0693G327 Amborella trichopoda HOM05D004038 ORTHO05D004619 1.0e-12 76.6 86 54.7
Hma1.2p1_0513F.1_g169760 Hydrangea macrophylla HOM05D004038 ORTHO05D004619 1.6e-10 69.3 71 54.9
Ciclev10019310m.g Citrus clementina HOM05D004038 ORTHO05D004619 3.6e-10 68.2 77 49.4
PSO170G2946 Papaver somniferum HOM05D004038 ORTHO05D004619 3.6e-10 68.2 75 49.3
MBI07_g27881_MAGBIO Magnolia biondii HOM05D004038 ORTHO05D004619 6.2e-10 67.4 67 53.7
SEGI_02142 Sequoiadendron giganteum HOM05D004038 ORTHO05D004619 6.2e-10 67.4 70 50.0
Thecc.05G000500 Theobroma cacao HOM05D004038 ORTHO05D004619 8.1e-10 67.0 74 50.0
Nn7g37426 Nelumbo nucifera HOM05D004038 ORTHO05D004619 1.8e-09 65.9 61 55.7
Cpa.g.sc9.239 Carica papaya HOM05D004038 ORTHO05D004619 3.1e-09 65.1 74 50.0
PSO357G0424 Papaver somniferum HOM05D004038 ORTHO05D004619 3.1e-09 65.1 75 46.7
Pp3c20_17330 Physcomitrium patens HOM05D004038 ORTHO05D004619 3.1e-09 65.1 71 50.7
HPP92_004656 Vanilla planifolia HOM05D004038 ORTHO05D004619 4.0e-09 64.7 70 54.3
COL.COLO4_14407 Corchorus olitorius HOM05D004038 ORTHO05D004619 5.3e-09 64.3 74 48.6
CsaV3_6G032420 Cucumis sativus L. HOM05D004038 ORTHO05D004619 5.3e-09 64.3 61 54.1
MBI10_g31866_MAGBIO Magnolia biondii HOM05D004038 ORTHO05D004619 5.3e-09 64.3 67 52.2
Peaxi162Scf01205g00162 Petunia axillaris HOM05D004038 ORTHO05D004619 5.3e-09 64.3 74 48.6
Nitab4.5_0000348g0080 Nicotiana tabacum HOM05D004038 ORTHO05D004619 6.9e-09 63.9 74 50.0
CAN.G68.3 Capsicum annuum HOM05D004038 ORTHO05D004619 9.0e-09 63.5 74 48.6
CiPaw.01G203200 Carya illinoinensis HOM05D004038 ORTHO05D004619 9.0e-09 63.5 74 48.6
PGSC0003DMG400013719 Solanum tuberosum HOM05D004038 ORTHO05D004619 9.0e-09 63.5 74 48.6
Lj6A289T17 Lonicera japonica HOM05D004038 ORTHO05D004619 1.2e-08 63.2 77 46.8
Lsat_1_v5_gn_1_77161 Lactuca sativa HOM05D004038 ORTHO05D004619 1.5e-08 62.8 60 56.7
Nn1g09401 Nelumbo nucifera HOM05D004038 ORTHO05D004619 1.5e-08 62.8 62 51.6
TAR365G0572 Trochodendron aralioides HOM05D004038 ORTHO05D004619 1.5e-08 62.8 73 46.6
ClCG08G010220 Citrullus lanatus HOM05D004038 ORTHO05D004619 2.0e-08 62.4 61 54.1
Duzib093G1419 Durio zibethinus HOM05D004038 ORTHO05D004619 2.0e-08 62.4 74 47.3
Duzib106G0840 Durio zibethinus HOM05D004038 ORTHO05D004619 2.0e-08 62.4 74 47.3
Eucgr.A00409 Eucalyptus grandis HOM05D004038 ORTHO05D004619 2.0e-08 62.4 73 52.1
Lj4g0009662 Lotus japonicus HOM05D004038 ORTHO05D004619 2.0e-08 62.4 69 53.6
SMO266G0055 Selaginella moellendorffii HOM05D004038 ORTHO05D004619 2.0e-08 62.4 60 51.7
Oeu061885.1 Olea europaea HOM05D004038 ORTHO05D004619 2.6e-08 62.0 58 56.9
GSVIVG01038267001 Vitis vinifera HOM05D004038 ORTHO05D004619 2.6e-08 62.0 72 48.6
Dinv24739 Davidia involucrata HOM05D004038 ORTHO05D004619 3.4e-08 61.6 61 54.1
Migut.N03013 Erythranthe guttata HOM05D004038 ORTHO05D004619 3.4e-08 61.6 58 56.9
Migut.O00491 Erythranthe guttata HOM05D004038 ORTHO05D004619 3.4e-08 61.6 58 56.9
Gorai.001G247600 Gossypium raimondii HOM05D004038 ORTHO05D004619 3.4e-08 61.6 73 47.9
Manes.01G009451 Manihot esculenta HOM05D004038 ORTHO05D004619 3.4e-08 61.6 58 55.2
Pp3c23_11480 Physcomitrium patens HOM05D004038 ORTHO05D004619 3.4e-08 61.6 57 56.1
QL10p064923 Quercus lobata HOM05D004038 ORTHO05D004619 3.4e-08 61.6 73 46.6
Rhsim09G0001600 Rhododendron simsii HOM05D004038 ORTHO05D004619 3.4e-08 61.6 74 45.9
Solyc08g015780.3 Solanum lycopersicum HOM05D004038 ORTHO05D004619 3.4e-08 61.6 71 50.7
Sopen08g005950 Solanum pennellii HOM05D004038 ORTHO05D004619 3.4e-08 61.6 74 47.3
vmacro00732 Vaccinium macrocarpon HOM05D004038 ORTHO05D004619 3.4e-08 61.6 80 46.2
Aqoxy2G04186 Aquilegia oxysepala HOM05D004038 ORTHO05D004619 4.4e-08 61.2 56 57.1
MELO3C011438.2 Cucumis melo HOM05D004038 ORTHO05D004619 4.4e-08 61.2 61 52.5
RcHm_v2.0_Chr2g0084351 Rosa chinensis HOM05D004038 ORTHO05D004619 4.4e-08 61.2 74 47.3
Sed0003085 Sechium edule HOM05D004038 ORTHO05D004619 4.4e-08 61.2 69 49.3
arahy.Tifrunner.gnm1.ann1.7FI9ND Arachis hypogaea HOM05D004038 ORTHO05D004619 5.8e-08 60.8 67 49.3
arahy.Tifrunner.gnm1.ann1.BTB9WU Arachis hypogaea HOM05D004038 ORTHO05D004619 5.8e-08 60.8 67 49.3
Cfa008534 Carpinus fangiana HOM05D004038 ORTHO05D004619 5.8e-08 60.8 74 48.6
CiPaw.02G125700 Carya illinoinensis HOM05D004038 ORTHO05D004619 5.8e-08 60.8 74 47.3
Haze_11105 Corylus avellana HOM05D004038 ORTHO05D004619 5.8e-08 60.8 74 48.6
Gohir.A13G079100 Gossypium hirsutum HOM05D004038 ORTHO05D004619 5.8e-08 60.8 73 47.9
Gohir.D13G095500 Gossypium hirsutum HOM05D004038 ORTHO05D004619 5.8e-08 60.8 73 47.9
Nitab4.5_0000219g0020 Nicotiana tabacum HOM05D004038 ORTHO05D004619 5.8e-08 60.8 79 46.8
Rhsim09G0010000 Rhododendron simsii HOM05D004038 ORTHO05D004619 5.8e-08 60.8 74 45.9
ECA248G0282 Erigeron canadensis HOM05D004038 ORTHO05D004619 7.6e-08 60.5 62 53.2
Pp3c24_10000 Physcomitrium patens HOM05D004038 ORTHO05D004619 7.6e-08 60.5 62 51.6
Potri.017G001300 Populus trichocarpa HOM05D004038 ORTHO05D004619 7.6e-08 60.5 74 48.6
Prupe.7G271200 Prunus persica HOM05D004038 ORTHO05D004619 7.6e-08 60.5 73 50.7
SMO361G0247 Selaginella moellendorffii HOM05D004038 ORTHO05D004619 7.6e-08 60.5 55 54.5
Solyc12g017540.2 Solanum lycopersicum HOM05D004038 ORTHO05D004619 7.6e-08 60.5 82 45.1
CDE08G0097 Ceratophyllum demersum HOM05D004038 ORTHO05D004619 9.9e-08 60.1 84 45.2
FvH4_1g00080 Fragaria vesca HOM05D004038 ORTHO05D004619 9.9e-08 60.1 74 47.3
FAN28G1790 Fragaria x ananassa HOM05D004038 ORTHO05D004619 9.9e-08 60.1 74 47.3
Peaxi162Scf00057g00179 Petunia axillaris HOM05D004038 ORTHO05D004619 9.9e-08 60.1 67 50.7
Potri.007G146500 Populus trichocarpa HOM05D004038 ORTHO05D004619 9.9e-08 60.1 55 58.2
Actinidia18385 Actinidia chinensis HOM05D004038 ORTHO05D004619 1.3e-07 59.7 78 46.2
MSTRG.22058 Avicennia marina HOM05D004038 ORTHO05D004619 1.3e-07 59.7 55 56.4
Ca_13541_v3 Cicer arietinum L. HOM05D004038 ORTHO05D004619 1.3e-07 59.7 57 56.1
Sabra07G0114900 Salix brachista HOM05D004038 ORTHO05D004619 1.3e-07 59.7 55 58.2
Sopen12g008310 Solanum pennellii HOM05D004038 ORTHO05D004619 1.3e-07 59.7 78 47.4
MD15G1142000 Malus domestica HOM05D004038 ORTHO05D004619 1.7e-07 59.3 73 47.9
Nitab4.5_0008814g0010 Nicotiana tabacum HOM05D004038 ORTHO05D004619 1.7e-07 59.3 70 51.4
Atru.chr3.1959 Acer truncatum HOM05D004038 ORTHO05D004619 2.2e-07 58.9 64 48.4
FAN26G0143 Fragaria x ananassa HOM05D004038 ORTHO05D004619 2.2e-07 58.9 74 47.3
Glyma.07G273900 Glycine max HOM05D004038 ORTHO05D004619 2.2e-07 58.9 61 52.5
Medtr4g134960 Medicago truncatula HOM05D004038 ORTHO05D004619 2.2e-07 58.9 68 50.0
Hund12302 Selenicereus undatus HOM05D004038 ORTHO05D004619 2.2e-07 58.9 85 42.4
ATR0743G108 Amborella trichopoda HOM05D004038 ORTHO05D004619 2.9e-07 58.5 60 53.3
Glyma.17G000500 Glycine max HOM05D004038 ORTHO05D004619 2.9e-07 58.5 69 49.3
Phvul.003G074400 Phaseolus vulgaris HOM05D004038 ORTHO05D004619 2.9e-07 58.5 55 56.4
PGSC0003DMG402006465 Solanum tuberosum HOM05D004038 ORTHO05D004619 2.9e-07 58.5 82 45.1
TAR636G2134 Trochodendron aralioides HOM05D004038 ORTHO05D004619 2.9e-07 58.5 62 50.0
Psat4g001200 Pisum sativum HOM05D004038 ORTHO05D004619 3.8e-07 58.2 83 44.6
unitig_27.g25138 Utricularia gibba HOM05D004038 ORTHO05D004619 3.8e-07 58.2 77 46.8
HPP92_001964 Vanilla planifolia HOM05D004038 ORTHO05D004619 3.8e-07 58.2 54 57.4
HanXRQChr01g0023591 Helianthus annuus HOM05D004038 ORTHO05D004619 4.9e-07 57.8 70 50.0
PGR042G1685 Punica granatum HOM05D004038 ORTHO05D004619 4.9e-07 57.8 74 50.0
SGA_v2.0_scaffold19G08904 Striga asiatica HOM05D004038 ORTHO05D004619 4.9e-07 57.8 77 45.5
TPR.G5970 Trifolium pratense HOM05D004038 ORTHO05D004619 4.9e-07 57.8 52 59.6
AUR62023688 Chenopodium quinoa HOM05D004038 ORTHO05D004619 6.4e-07 57.4 84 45.2
Dinv33253 Davidia involucrata HOM05D004038 ORTHO05D004619 6.4e-07 57.4 61 52.5
Migut.G00797 Erythranthe guttata HOM05D004038 ORTHO05D004619 6.4e-07 57.4 60 50.0
SalBow3G0041 Salvia bowleyana HOM05D004038 ORTHO05D004619 6.4e-07 57.4 54 55.6
Sc19g0002460 Simmondsia chinensis HOM05D004038 ORTHO05D004619 6.4e-07 57.4 80 47.5
BcaC02g07135 Brassica carinata HOM05D004038 ORTHO05D004619 8.4e-07 57.0 67 44.8
DCAR_023794 Daucus carota HOM05D004038 ORTHO05D004619 8.4e-07 57.0 69 46.4
Thhalv10001361m.g Eutrema salsugineum HOM05D004038 ORTHO05D004619 8.4e-07 57.0 95 36.8
THA.LOC104802352 Tarenaya hassleriana HOM05D004038 ORTHO05D004619 8.4e-07 57.0 89 39.3
VMungo1215G2173 Vigna mungo HOM05D004038 ORTHO05D004619 8.4e-07 57.0 52 57.7
Mapoly0053s0086 Marchantia polymorpha HOM05D004038 ORTHO05D004619 1.1e-06 56.6 52 53.8
TWI63G0698 Tripterygium wilfordii HOM05D004038 ORTHO05D004619 1.1e-06 56.6 73 46.6
Actinidia34559 Actinidia chinensis HOM05D004038 ORTHO05D004619 1.9e-06 55.8 79 41.8
CANSAT56G2502 Cannabis sativa HOM05D004038 ORTHO05D004619 1.9e-06 55.8 55 50.9
CDE09G0082 Ceratophyllum demersum HOM05D004038 ORTHO05D004619 1.9e-06 55.8 51 56.9
MD02G1000800 Malus domestica HOM05D004038 ORTHO05D004619 1.9e-06 55.8 61 49.2
AUR62002499 Chenopodium quinoa HOM05D004038 ORTHO05D004619 2.4e-06 55.5 84 45.2
Ah.13g073130 Amaranthus hybridus HOM05D004038 ORTHO05D004619 3.2e-06 55.1 57 49.1
Pp3c23_5610 Physcomitrium patens HOM05D004038 ORTHO05D004619 3.2e-06 55.1 51 56.9
MSTRG.24543 Avicennia marina HOM05D004038 ORTHO05D004619 5.4e-06 54.3 55 50.9
BcaB02g08921 Brassica carinata HOM05D004038 ORTHO05D004619 5.4e-06 54.3 55 47.3
FAN23G0195 Fragaria x ananassa HOM05D004038 ORTHO05D004619 5.4e-06 54.3 74 44.6
BcaC02g12341 Brassica carinata HOM05D004038 ORTHO05D004619 7.1e-06 53.9 67 44.8
C04p04970 Brassica napus HOM05D004038 ORTHO05D004619 7.1e-06 53.9 67 44.8
BolC4t22128H Brassica oleracea HOM05D004038 ORTHO05D004619 7.1e-06 53.9 67 44.8
Cc03_g15890 Coffea canephora HOM05D004038 ORTHO05D004619 7.1e-06 53.9 57 47.4


User provided reference genes

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