Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.5e-95 352.8 180 100.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.4e-40 169.5 133 66.9
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 5.5e-37 158.3 163 55.8
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.2e-36 157.1 113 69.0
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 2.7e-36 156.0 130 57.7
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 2.7e-36 156.0 183 52.5
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 3.6e-36 155.6 112 66.1
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 4.7e-36 155.2 179 52.0
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 4.7e-36 155.2 111 70.3
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 4.7e-36 155.2 175 49.7
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 1.4e-35 153.7 112 68.8
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.4e-35 153.7 175 49.1
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 3.4e-34 149.1 121 62.8
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 4.4e-34 148.7 158 50.0
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.7e-34 148.3 157 50.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 5.7e-34 148.3 112 63.4
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 5.7e-34 148.3 166 50.6
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 2.8e-33 146.0 158 51.3
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.8e-33 146.0 111 63.1
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.8e-33 146.0 159 49.7
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 3.7e-33 145.6 178 47.2
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.7e-33 145.6 130 56.9
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.8e-33 145.2 112 61.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 4.8e-33 145.2 112 61.6
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 4.8e-33 145.2 119 61.3
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 6.3e-33 144.8 175 46.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 6.3e-33 144.8 111 60.4
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.3e-33 144.8 111 61.3
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 6.3e-33 144.8 108 63.0
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.1e-32 144.1 108 63.9
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.4e-32 143.7 112 62.5
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 2.4e-32 142.9 183 47.0
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.4e-32 142.9 112 61.6
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 2.4e-32 142.9 172 47.1
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 3.1e-32 142.5 105 64.8
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 3.1e-32 142.5 105 63.8
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 5.4e-32 141.7 116 61.2
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 5.4e-32 141.7 105 63.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 7.0e-32 141.4 181 43.1
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.0e-32 141.4 94 72.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.2e-31 140.6 134 55.2
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.2e-31 140.6 160 52.5
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.2e-31 140.6 116 61.2
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.6e-31 140.2 105 62.9
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.6e-31 140.2 112 61.6
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.0e-31 139.8 134 55.2
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.0e-31 139.8 124 57.3
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-31 139.8 111 63.1
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.0e-31 139.8 111 63.1
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.0e-31 139.8 104 65.4
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 2.7e-31 139.4 112 58.0
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 3.5e-31 139.0 134 54.5
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 5.9e-31 138.3 101 66.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 5.9e-31 138.3 108 58.3
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 5.9e-31 138.3 112 61.6
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 7.7e-31 137.9 108 62.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 7.7e-31 137.9 134 54.5
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.7e-31 137.9 114 57.9
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.7e-31 137.9 114 57.9
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.0e-30 137.5 110 59.1
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.3e-30 137.1 103 67.0
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.3e-30 137.1 128 57.0
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.7e-30 136.7 113 59.3
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.9e-30 136.0 139 53.2
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 2.9e-30 136.0 106 64.2
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 3.8e-30 135.6 111 58.6
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 5.0e-30 135.2 108 57.4
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 8.6e-30 134.4 112 58.9
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 8.6e-30 134.4 112 58.0
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 8.6e-30 134.4 110 58.2
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.5e-29 133.7 105 58.1
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.5e-29 133.7 139 53.2
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.9e-29 133.3 139 53.2
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.9e-29 133.3 139 53.2
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.9e-29 133.3 112 58.0
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 3.2e-29 132.5 185 41.6
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 4.2e-29 132.1 95 67.4
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 7.2e-29 131.3 101 62.4
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 2.1e-28 129.8 102 60.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 2.1e-28 129.8 129 57.4
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 6.1e-28 128.3 109 56.9
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.8e-27 126.7 97 62.9
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 4.0e-27 125.6 154 44.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 8.8e-27 124.4 99 61.6
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 8.8e-27 124.4 131 51.1
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.7e-25 120.2 98 62.2
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 4.9e-25 118.6 92 62.0
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.4e-24 117.1 103 58.3
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.8e-24 116.7 167 44.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 2.4e-24 116.3 109 56.0
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 9.2e-24 114.4 103 57.3
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.6e-23 113.6 94 62.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 1.0e-22 110.9 102 53.9
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.5e-21 106.3 87 55.2
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 5.6e-21 105.1 71 70.4
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 9.5e-21 104.4 95 53.7
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.6e-20 103.6 94 55.3
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 2.1e-20 103.2 106 50.0
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 2.3e-19 99.8 121 47.9
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 8.9e-19 97.8 88 53.4
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.6e-18 96.3 96 53.1
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 4.9e-17 92.0 89 49.4
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 5.0e-14 82.0 59 61.0
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.1e-13 80.9 61 65.6
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.7e-09 65.9 77 48.1
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.5e-07 59.3 107 35.5


User provided reference genes

Program Settings