Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 4.7e-149 531.2 268 100.0
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 8.1e-85 317.8 259 62.5
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 2.4e-84 316.2 237 62.9
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 3.1e-84 315.8 236 66.1
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 4.0e-84 315.5 237 65.0
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.5e-83 313.5 255 62.4
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 2.0e-83 313.2 261 61.3
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.7e-82 310.1 251 62.5
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 6.4e-82 308.1 237 62.9
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 6.4e-82 308.1 226 65.5
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 8.4e-82 307.8 261 61.3
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.9e-81 306.6 234 63.2
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 4.2e-81 305.4 250 60.8
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 7.1e-81 304.7 236 63.6
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.2e-80 303.9 261 59.4
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 2.7e-80 302.8 257 59.1
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 3.5e-80 302.4 229 64.2
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 3.5e-80 302.4 248 61.3
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 4.6e-80 302.0 267 58.8
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 7.9e-80 301.2 266 57.9
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 7.9e-80 301.2 270 57.8
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 7.9e-80 301.2 225 64.0
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.0e-79 300.8 239 63.2
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 1.0e-79 300.8 242 60.7
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 2.3e-79 299.7 237 63.3
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 2.3e-79 299.7 266 58.6
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 2.3e-79 299.7 240 62.1
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 6.7e-79 298.1 225 64.0
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 8.7e-79 297.7 246 60.2
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 8.7e-79 297.7 250 59.2
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.1e-78 297.4 256 59.8
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.1e-78 297.4 233 60.9
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.5e-78 297.0 225 64.4
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.9e-78 296.6 250 59.6
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.5e-78 296.2 260 58.5
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.5e-78 296.2 237 62.9
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 5.6e-78 295.0 240 60.4
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 9.6e-78 294.3 248 59.7
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.3e-77 293.9 270 56.7
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.6e-77 293.5 225 63.6
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 2.1e-77 293.1 256 59.0
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 3.7e-77 292.4 267 58.1
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 4.8e-77 292.0 253 60.1
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 6.2e-77 291.6 263 57.8
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.1e-76 290.8 271 57.9
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.1e-76 290.8 260 56.5
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.4e-76 290.4 255 60.0
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.8e-76 290.0 225 63.1
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.4e-76 289.7 260 59.2
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 2.4e-76 289.7 237 60.3
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 2.4e-76 289.7 241 58.9
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.4e-76 289.7 239 61.9
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 9.0e-76 287.7 236 60.2
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 1.2e-75 287.3 240 61.2
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.2e-75 287.3 236 60.6
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 2.0e-75 286.6 243 59.7
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 2.6e-75 286.2 240 61.7
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 3.4e-75 285.8 238 60.9
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 4.5e-75 285.4 241 61.4
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 5.8e-75 285.0 238 61.3
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.3e-74 283.9 266 57.1
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-74 283.9 266 57.1
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.2e-74 283.1 225 62.2
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.2e-74 283.1 225 62.7
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.9e-74 282.7 253 57.7
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 3.8e-74 282.3 240 59.6
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 4.9e-74 282.0 267 56.2
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 6.4e-74 281.6 239 58.6
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 6.4e-74 281.6 239 58.6
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.1e-73 280.8 249 58.2
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.1e-73 280.8 240 59.2
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.4e-73 280.4 269 53.9
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 4.2e-73 278.9 238 60.1
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 4.2e-73 278.9 220 61.8
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.2e-72 277.3 256 54.7
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.2e-72 277.3 256 54.7
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 1.6e-72 276.9 263 54.8
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 2.1e-72 276.6 255 56.1
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 2.7e-72 276.2 233 60.9
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.7e-72 276.2 267 56.2
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 6.0e-72 275.0 220 59.5
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.8e-71 273.5 225 60.4
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.9e-70 270.0 248 57.3
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 7.4e-70 268.1 242 56.2
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.7e-69 265.8 249 56.2
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.4e-68 263.8 220 60.0
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 3.1e-68 262.7 216 62.0
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 7.6e-67 258.1 230 57.8
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 4.9e-66 255.4 218 59.6
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 4.9e-66 255.4 208 64.4
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 7.1e-65 251.5 197 61.9
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.8e-63 246.9 259 52.9
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 6.7e-63 245.0 198 59.6
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.0e-59 233.4 218 52.8
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 1.9e-57 226.9 214 53.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 4.6e-56 222.2 172 62.8
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.3e-50 204.1 170 58.2
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.0e-47 194.5 225 42.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 1.0e-47 194.5 261 45.6
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.0e-39 166.4 116 70.7
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.4e-36 157.5 225 42.2
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 7.7e-35 151.8 207 40.1
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 5.0e-34 149.1 230 41.7
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 5.5e-33 145.6 223 37.2
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 2.5e-25 120.2 225 32.4
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 4.0e-23 112.8 144 43.8
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.2e-21 107.1 85 56.5
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.1e-20 104.8 104 51.0
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.0e-18 98.2 72 63.9
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 7.5e-14 82.0 68 60.3
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 3.7e-13 79.7 71 54.9
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.7e-11 73.6 53 60.4
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.4e-07 61.2 103 36.9


User provided reference genes

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