Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 7.0e-204 713.8 371 100.0
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 4.7e-91 339.0 352 58.0
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 4.9e-88 328.9 348 57.2
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.4e-87 327.4 371 55.3
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 2.7e-86 323.2 347 57.6
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 2.7e-86 323.2 354 55.9
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.3e-80 304.3 368 53.0
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 3.7e-80 302.8 347 54.2
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 2.4e-79 300.1 366 53.3
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 9.2e-79 298.1 347 53.0
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 1.0e-77 294.7 358 51.1
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 1.3e-77 294.3 360 52.8
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 6.6e-77 292.0 354 53.1
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 1.1e-76 291.2 379 49.3
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 7.3e-76 288.5 372 50.3
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 3.1e-74 283.1 358 52.5
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 5.2e-74 282.3 373 49.9
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 8.9e-74 281.6 300 54.0
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 2.0e-73 280.4 336 53.6
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 2.0e-73 280.4 390 48.7
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 4.4e-73 279.3 364 48.9
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 1.3e-72 277.7 344 52.9
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 4.9e-72 275.8 347 50.4
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 1.4e-71 274.2 331 52.3
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 1.9e-71 273.9 332 51.5
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 1.9e-71 273.9 370 47.3
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 5.4e-71 272.3 370 50.3
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 9.2e-71 271.6 330 50.9
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 9.2e-71 271.6 380 48.9
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.6e-70 270.8 365 47.9
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.7e-70 270.0 365 47.7
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 4.6e-70 269.2 351 50.4
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 4.6e-70 269.2 368 48.9
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 7.8e-70 268.5 335 51.0
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.3e-69 267.7 333 54.1
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 1.7e-69 267.3 337 50.4
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.3e-69 266.9 335 50.1
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.0e-69 266.5 335 50.4
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 3.9e-69 266.2 368 48.6
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 3.9e-69 266.2 367 49.0
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 6.6e-69 265.4 374 47.1
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 1.1e-68 264.6 370 49.2
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 9.6e-68 261.5 345 50.4
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 4.7e-67 259.2 348 46.8
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 6.2e-67 258.8 374 48.7
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 6.2e-67 258.8 304 52.6
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 1.4e-66 257.7 331 50.8
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 1.4e-66 257.7 306 52.6
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 8.9e-66 255.0 411 43.6
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.6e-65 253.4 385 46.8
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 4.4e-65 252.7 361 46.5
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 1.3e-64 251.1 354 49.2
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 2.2e-64 250.4 358 46.9
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 6.4e-64 248.8 352 49.4
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 6.4e-64 248.8 252 57.1
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 1.4e-63 247.7 287 53.3
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 1.9e-63 247.3 328 49.4
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 2.4e-63 246.9 363 47.1
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 9.3e-63 245.0 367 46.0
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 1.2e-62 244.6 379 46.4
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 2.1e-62 243.8 361 46.3
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 3.5e-62 243.0 314 49.4
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 3.5e-62 243.0 379 46.4
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 1.0e-61 241.5 337 47.2
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 1.3e-61 241.1 333 46.5
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 1.9e-60 237.3 339 46.9
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 1.9e-60 237.3 322 48.4
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 2.5e-60 236.9 339 46.9
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 2.5e-60 236.9 339 45.7
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 7.3e-60 235.3 309 50.2
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 7.3e-60 235.3 286 52.4
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 9.6e-60 235.0 337 46.6
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 1.6e-59 234.2 333 45.6
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 4.8e-59 232.6 335 47.8
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 6.2e-59 232.3 349 47.9
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 6.2e-59 232.3 342 47.7
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 3.1e-58 229.9 333 48.9
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 4.0e-58 229.6 337 45.7
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 9.9e-57 224.9 343 44.3
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 2.2e-56 223.8 299 49.8
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 2.2e-56 223.8 384 43.8
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 1.4e-55 221.1 380 43.2
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.4e-55 221.1 278 54.3
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.4e-55 221.1 278 54.3
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 2.4e-55 220.3 345 44.1
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 4.2e-55 219.5 362 41.4
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 2.7e-54 216.9 312 47.8
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.7e-54 216.9 277 50.2
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 6.0e-54 215.7 348 44.0
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 3.0e-53 213.4 338 46.2
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 5.1e-53 212.6 332 45.8
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 6.7e-53 212.2 293 47.4
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 6.7e-53 212.2 333 43.8
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 2.5e-52 210.3 370 40.8
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 3.3e-52 209.9 326 45.4
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 3.3e-52 209.9 363 42.7
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 4.3e-52 209.5 294 46.9
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 1.8e-50 204.1 330 45.5
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 1.5e-49 201.1 358 40.5
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 2.0e-49 200.7 349 43.0
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 2.6e-49 200.3 342 45.0
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 5.8e-49 199.1 330 44.2
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 1.1e-47 194.9 261 51.0
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 2.7e-46 190.3 311 40.8
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 4.6e-46 189.5 255 48.2
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 1.3e-45 188.0 299 46.8
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 2.3e-45 187.2 323 43.7
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 3.9e-45 186.4 323 43.7
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 6.7e-45 185.7 326 43.3
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 8.7e-45 185.3 248 48.0
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 2.5e-44 183.7 313 43.8
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 2.8e-43 180.3 324 43.2
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 4.8e-43 179.5 305 42.3
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 6.9e-42 175.6 315 42.5
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 1.5e-41 174.5 366 40.2
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 7.6e-41 172.2 329 40.7
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 1.0e-40 171.8 329 40.7
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 1.0e-40 171.8 329 40.7
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 1.4e-39 167.9 317 42.0
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 1.4e-39 167.9 317 42.0
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 7.1e-39 165.6 173 53.8
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 4.8e-35 152.9 316 40.2
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.4e-34 150.6 199 53.8
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.4e-34 150.6 199 53.8
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 2.6e-33 147.1 272 40.4
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.9e-33 146.0 210 50.5
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 1.7e-32 144.4 333 37.5
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 8.5e-32 142.1 328 39.6
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 1.8e-29 134.4 336 33.3
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 1.9e-28 131.0 105 62.9
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 7.4e-28 129.0 115 60.0
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 6.9e-26 122.5 248 41.5
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 1.3e-24 118.2 236 41.1
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.7e-24 117.9 198 46.0
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.2e-24 117.5 198 46.0
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.9e-24 117.1 198 46.0
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.0e-24 116.3 198 45.5
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.5e-24 115.9 198 45.5
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.9e-23 114.4 198 44.9
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 1.8e-21 107.8 109 59.6
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 2.6e-20 104.0 109 58.7
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 8.2e-19 99.0 160 45.6
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.5e-17 94.7 198 40.9
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 2.0e-17 94.4 213 37.1
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.6e-17 94.0 100 51.0
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 6.7e-13 79.3 101 50.5
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 2.2e-11 74.3 227 30.0
AagrBONN_evm.TU.Sc2ySwM_117.2428 Anthoceros agrestis HOM05D025386 ORTHO05D026614 2.6e-09 67.4 134 35.8
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 4.5e-09 66.6 70 55.7
Zm00001eb365900 Zea mays HOM05D004683 ORTHO05D005388 1.9e-07 61.2 85 40.0
SEGI_33504 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 2.5e-07 60.8 107 32.7
Os05g0547100 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 4.2e-07 60.1 156 34.0
FAN11G0338 Fragaria x ananassa HOM05D004683 ORTHO05D035386 9.4e-07 58.9 135 37.8


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