Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 3.7e-260 901.0 445 100.0
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 9.0e-105 384.8 422 45.5
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 8.4e-103 378.3 417 46.8
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 1.2e-101 374.4 418 47.6
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.7e-101 373.2 411 47.7
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 6.0e-101 372.1 429 46.4
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 7.9e-101 371.7 429 46.4
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 7.9e-101 371.7 436 46.1
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 3.9e-100 369.4 458 45.0
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 6.7e-100 368.6 440 45.9
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 8.7e-100 368.2 412 47.1
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.9e-99 367.1 458 44.8
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 5.6e-99 365.5 462 44.2
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 7.4e-99 365.2 458 44.5
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 7.4e-99 365.2 431 46.9
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 2.1e-98 363.6 461 44.9
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 2.8e-98 363.2 418 47.1
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 3.7e-98 362.8 419 47.0
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 4.8e-98 362.5 421 46.8
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 8.1e-98 361.7 460 44.6
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 8.1e-98 361.7 460 44.6
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.1e-97 361.3 442 45.0
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 9.0e-97 358.2 412 44.2
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.2e-96 357.8 441 44.7
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.2e-96 357.8 442 44.8
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 2.6e-96 356.7 447 44.5
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 3.4e-96 356.3 424 45.3
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 3.4e-96 356.3 418 45.9
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 4.5e-96 355.9 412 43.9
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 4.5e-96 355.9 412 43.9
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.8e-96 355.5 413 45.5
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 2.9e-95 353.2 412 45.9
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.9e-95 353.2 431 45.5
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 4.9e-95 352.4 418 45.7
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.1e-94 351.3 424 44.3
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 1.1e-94 351.3 421 45.4
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 1.4e-94 350.9 430 45.6
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.9e-94 350.5 460 43.0
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.5e-94 350.1 438 43.8
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.5e-94 349.0 454 43.4
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 1.2e-93 347.8 426 44.4
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.6e-93 347.4 414 45.7
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 2.7e-93 346.7 450 43.6
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 2.7e-93 346.7 412 46.1
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 2.7e-93 346.7 414 44.4
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 3.5e-93 346.3 420 44.5
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.8e-92 344.0 422 45.0
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.8e-92 344.0 413 45.0
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 3.9e-92 342.8 415 44.8
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 8.7e-92 341.7 419 45.1
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 8.7e-92 341.7 414 45.2
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 9.6e-91 338.2 420 45.5
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 9.6e-91 338.2 425 43.1
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 9.6e-91 338.2 451 39.7
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.6e-90 337.4 417 43.2
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.1e-90 337.0 440 42.3
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.8e-90 336.7 415 44.3
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.8e-90 335.9 465 41.7
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 1.4e-89 334.3 453 42.2
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.4e-89 334.3 405 41.7
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.8e-89 334.0 411 43.6
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 4.0e-89 332.8 417 42.9
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 4.0e-89 332.8 433 42.0
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 6.9e-89 332.0 387 45.0
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 9.0e-89 331.6 423 42.8
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 3.4e-88 329.7 462 41.3
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 4.5e-88 329.3 457 42.2
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 7.6e-88 328.6 436 43.1
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.9e-87 326.6 450 40.0
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 8.4e-87 325.1 424 45.8
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 8.4e-87 325.1 430 42.8
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.4e-86 324.3 440 41.4
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.5e-86 323.6 445 42.5
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 6.1e-85 318.9 451 40.6
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 1.3e-84 317.8 382 46.1
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 1.3e-84 317.8 373 45.0
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 3.0e-84 316.6 474 40.3
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.7e-84 315.5 373 44.8
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 6.7e-84 315.5 420 41.0
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 7.4e-83 312.0 453 40.2
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.2e-82 310.5 381 42.3
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 1.8e-81 307.4 381 42.5
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 5.3e-81 305.8 374 42.5
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 6.9e-81 305.4 378 42.9
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 2.0e-80 303.9 521 37.8
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 5.9e-80 302.4 374 43.0
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 2.2e-79 300.4 368 43.2
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 3.8e-79 299.7 499 35.9
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 6.5e-79 298.9 369 42.5
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 2.5e-78 297.0 348 44.8
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 9.4e-78 295.0 446 42.2
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 2.1e-77 293.9 440 40.0
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 4.6e-77 292.7 372 41.4
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 7.9e-77 292.0 417 41.2
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.0e-76 291.6 407 42.5
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 1.4e-76 291.2 440 39.5
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.8e-76 290.8 446 42.2
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 6.7e-76 288.9 385 41.0
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 1.5e-75 287.7 423 39.7
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 5.7e-75 285.8 385 41.3
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 7.4e-75 285.4 453 37.1
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 9.7e-75 285.0 451 37.3
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 1.3e-74 284.6 383 41.8
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 2.2e-74 283.9 411 38.7
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 8.2e-74 282.0 397 41.1
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 8.2e-74 282.0 460 38.5
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 1.4e-73 281.2 425 39.5
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 3.1e-73 280.0 448 39.5
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 7.7e-72 275.4 374 39.6
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 6.1e-69 265.8 280 50.0
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 1.8e-68 264.2 424 38.7
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 5.1e-68 262.7 285 49.8
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 4.8e-66 256.1 301 43.5
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 6.3e-66 255.8 430 34.7
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 5.3e-65 252.7 418 38.5
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.6e-64 250.4 409 38.1
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 1.0e-63 248.4 392 38.0
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 3.0e-60 236.9 400 38.0
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 1.1e-57 228.4 440 33.9
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 3.5e-56 223.4 340 39.7
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 5.0e-55 219.5 406 33.5
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-51 208.4 418 34.7
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 5.0e-47 193.0 268 41.0
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 3.1e-28 130.6 276 34.8
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.6e-16 91.7 154 37.7
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.5e-14 84.3 75 58.7
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 3.3e-14 84.0 111 36.0
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 1.1e-06 58.9 49 61.2


User provided reference genes

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