Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 2.6e-132 475.3 231 100.0
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 9.7e-103 377.1 231 75.8
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 9.7e-103 377.1 231 77.5
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 1.3e-102 376.7 231 75.8
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 1.8e-101 372.9 223 77.6
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 5.3e-101 371.3 232 75.0
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 1.2e-100 370.2 231 73.2
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 2.6e-100 369.0 231 73.6
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 7.7e-100 367.5 219 77.6
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 2.9e-99 365.5 220 77.3
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 3.8e-99 365.2 231 73.6
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 5.0e-99 364.8 232 75.9
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 5.0e-99 364.8 223 75.8
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 1.9e-98 362.8 225 75.1
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 1.9e-98 362.8 224 75.4
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 5.5e-98 361.3 220 75.9
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 7.2e-98 360.9 223 72.2
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 9.4e-98 360.5 229 74.7
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 1.6e-97 359.8 220 74.5
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 3.6e-97 358.6 227 71.8
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 4.7e-97 358.2 231 71.9
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 4.7e-97 358.2 220 76.4
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 8.0e-97 357.5 218 75.7
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 8.0e-97 357.5 225 74.7
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 8.0e-97 357.5 225 74.2
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.0e-96 357.1 220 75.5
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 1.4e-96 356.7 224 73.7
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 1.4e-96 356.7 243 70.8
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 1.4e-96 356.7 231 72.3
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 3.0e-96 355.5 219 75.3
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 4.0e-96 355.1 241 71.4
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 5.2e-96 354.8 231 71.9
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 5.2e-96 354.8 220 75.0
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 8.8e-96 354.0 220 74.5
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 8.8e-96 354.0 232 72.4
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 1.2e-95 353.6 222 73.9
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 1.2e-95 353.6 232 74.1
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 1.5e-95 353.2 231 71.4
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 2.0e-95 352.8 230 71.7
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 2.6e-95 352.4 220 73.6
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 3.3e-95 352.1 216 75.0
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 4.4e-95 351.7 209 78.0
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 4.4e-95 351.7 225 72.4
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 5.7e-95 351.3 230 72.2
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 5.7e-95 351.3 284 60.9
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 5.7e-95 351.3 228 71.5
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 9.7e-95 350.5 218 74.3
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 9.7e-95 350.5 209 76.6
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 1.3e-94 350.1 220 75.5
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 1.3e-94 350.1 209 77.0
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.8e-94 349.0 233 69.5
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 6.3e-94 347.8 212 75.0
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 6.3e-94 347.8 220 72.7
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 8.2e-94 347.4 227 71.4
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.4e-93 346.7 231 70.6
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 1.4e-93 346.7 223 72.6
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.4e-93 346.7 231 72.3
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 1.8e-93 346.3 238 68.1
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 3.1e-93 345.5 228 70.6
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 5.3e-93 344.7 212 75.5
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 1.2e-92 343.6 273 61.9
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 1.6e-92 343.2 221 73.3
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 1.6e-92 343.2 220 70.5
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 2.0e-92 342.8 232 69.4
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 5.9e-92 341.3 218 72.9
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 5.9e-92 341.3 212 75.5
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 7.7e-92 340.9 221 72.4
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 2.2e-91 339.3 267 62.9
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 3.8e-91 338.6 258 63.6
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 2.5e-90 335.9 222 70.7
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 7.2e-90 334.3 201 75.6
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 1.8e-88 329.7 231 69.7
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 2.8e-86 322.4 235 64.3
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 1.1e-85 320.5 209 70.3
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 3.1e-85 318.9 196 73.5
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 9.1e-85 317.4 239 64.9
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 3.8e-83 312.0 204 71.6
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 5.0e-83 311.6 229 65.5
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 3.3e-82 308.9 230 65.7
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 4.2e-82 308.5 223 65.5
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 4.2e-82 308.5 182 77.5
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 9.5e-82 307.4 229 64.6
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 9.5e-82 307.4 229 65.5
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 9.5e-82 307.4 229 64.6
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 9.5e-82 307.4 230 66.1
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 1.2e-81 307.0 229 65.5
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 1.0e-80 303.9 230 65.2
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 3.0e-80 302.4 216 66.7
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 5.2e-80 301.6 220 65.9
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 8.9e-80 300.8 229 64.2
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 4.4e-79 298.5 230 63.0
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 8.3e-78 294.3 229 62.4
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 4.1e-77 292.0 229 62.4
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 4.1e-77 292.0 229 62.9
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 1.6e-76 290.0 218 62.4
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 4.5e-76 288.5 219 63.9
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 1.3e-75 287.0 202 66.8
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 5.0e-75 285.0 253 56.5
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.9e-74 283.1 216 64.8
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 4.3e-74 282.0 214 60.7
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 2.8e-73 279.3 220 62.3
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 4.7e-73 278.5 183 70.5
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 5.2e-72 275.0 219 59.8
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 1.4e-69 266.9 179 69.3
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 7.0e-69 264.6 151 78.1
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 3.0e-67 259.2 220 58.6
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 1.2e-65 253.8 151 74.2
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 4.6e-60 235.3 143 74.8
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 5.1e-59 231.9 150 74.0
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 1.7e-54 216.9 154 68.8
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 3.7e-54 215.7 152 66.4
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 6.4e-54 214.9 140 72.1
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 7.8e-52 208.0 150 65.3
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.1e-50 204.1 144 66.7
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 2.4e-45 186.4 142 64.8
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.6e-39 166.4 146 57.5
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 4.2e-37 159.1 185 38.9
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 2.8e-33 146.4 198 38.9
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 2.7e-28 129.8 157 49.7
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 4.6e-20 102.4 62 79.0
ATR1128G007 Amborella trichopoda HOM05D006179 ORTHO05D065230 1.1e-18 97.8 95 55.8
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.4e-16 90.1 137 40.1
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 1.4e-08 64.3 36 72.2
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 6.9e-08 62.0 96 37.5
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 6.5e-06 55.5 98 34.7
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 8.5e-06 55.1 77 44.2


User provided reference genes

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