Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0620G154 Amborella trichopoda HOM05D064191 ORTHO05D000073 4.9e-69 264.2 123 100.0
ATR0620G012 Amborella trichopoda HOM05D000075 ORTHO05D000073 2.5e-25 119.0 119 50.4
ATR0620G131 Amborella trichopoda HOM05D064191 ORTHO05D064324 7.4e-25 117.5 62 88.7
ATR0620G141 Amborella trichopoda HOM05D000075 ORTHO05D000073 2.8e-24 115.5 123 50.4
ATR0620G148 Amborella trichopoda HOM05D000075 ORTHO05D000073 1.1e-23 113.6 123 45.5
ATR0620G122 Amborella trichopoda HOM05D000075 ORTHO05D000073 1.6e-19 99.8 122 42.6
ATR0620G145 Amborella trichopoda HOM05D000075 ORTHO05D000073 1.0e-18 97.1 113 43.4
Eucgr.L03520 Eucalyptus grandis HOM05D000075 ORTHO05D000073 9.1e-15 84.0 117 38.5
QL09p016828 Quercus lobata HOM05D000075 ORTHO05D000073 1.5e-14 83.2 115 39.1
ATR0620G102 Amborella trichopoda HOM05D000075 ORTHO05D000073 2.0e-14 82.8 121 38.8
ATR0661G247 Amborella trichopoda HOM05D000075 ORTHO05D000073 2.6e-14 82.4 113 37.2
Eucgr.K03024 Eucalyptus grandis HOM05D000075 ORTHO05D000073 2.6e-14 82.4 113 39.8
ATR0620G060 Amborella trichopoda HOM05D000075 ORTHO05D000073 3.4e-14 82.0 100 45.0
Eucgr.K03019 Eucalyptus grandis HOM05D000075 ORTHO05D000073 5.9e-14 81.3 115 39.1
Nn7g36368 Nelumbo nucifera HOM05D000075 ORTHO05D000073 1.3e-13 80.1 118 34.7
Aqoxy6G00675 Aquilegia oxysepala HOM05D000075 ORTHO05D000073 6.5e-13 77.8 121 34.7
Dinv37110 Davidia involucrata HOM05D000075 ORTHO05D000073 1.1e-12 77.0 113 36.3
QL09p016863 Quercus lobata HOM05D000075 ORTHO05D000073 1.9e-12 76.3 112 39.3
ATR0661G404 Amborella trichopoda HOM05D000075 ORTHO05D000073 7.2e-12 74.3 106 39.6
Thecc.05G028400 Theobroma cacao HOM05D000075 ORTHO05D000073 7.2e-12 74.3 110 37.3
ATR0620G087 Amborella trichopoda HOM05D000075 ORTHO05D000073 9.4e-12 73.9 97 38.1
Actinidia29163 Actinidia chinensis HOM05D000075 ORTHO05D000073 1.2e-11 73.6 118 35.6
QL09p016886 Quercus lobata HOM05D000075 ORTHO05D000073 1.6e-11 73.2 113 35.4
GSVIVG01034058001 Vitis vinifera HOM05D000075 ORTHO05D000073 1.6e-11 73.2 114 35.1
ATR0661G115 Amborella trichopoda HOM05D000075 ORTHO05D000073 2.1e-11 72.8 106 40.6
ATR0012G025 Amborella trichopoda HOM05D000075 ORTHO05D000073 2.7e-11 72.4 98 38.8
Hma1.2p1_1359F.1_g278030 Hydrangea macrophylla HOM05D000075 ORTHO05D000073 2.7e-11 72.4 118 32.2
Nitab4.5_0000652g0050 Nicotiana tabacum HOM05D000075 ORTHO05D000073 3.6e-11 72.0 114 34.2
Eucgr.K03038 Eucalyptus grandis HOM05D000075 ORTHO05D000073 6.1e-11 71.2 115 34.8
Manes.03G155200 Manihot esculenta HOM05D000075 ORTHO05D000073 6.1e-11 71.2 114 29.8
Sopen10g034420 Solanum pennellii HOM05D000075 ORTHO05D000073 1.0e-10 70.5 119 31.1
FAN12G0683 Fragaria x ananassa HOM05D000075 ORTHO05D000073 1.4e-10 70.1 115 33.9
PSO081G0068 Papaver somniferum HOM05D000075 ORTHO05D000073 1.4e-10 70.1 122 33.6
GSVIVG01034060001 Vitis vinifera HOM05D000075 ORTHO05D000073 1.4e-10 70.1 114 34.2
Lj1g0021454 Lotus japonicus HOM05D000075 ORTHO05D000073 1.8e-10 69.7 115 33.9
Manes.15G041000 Manihot esculenta HOM05D000075 ORTHO05D000073 1.8e-10 69.7 115 31.3
TAR636G2880 Trochodendron aralioides HOM05D000075 ORTHO05D000073 1.8e-10 69.7 112 33.0
Nitab4.5_0002823g0010 Nicotiana tabacum HOM05D000075 ORTHO05D000073 2.3e-10 69.3 111 33.3
TAR636G3013 Trochodendron aralioides HOM05D000075 ORTHO05D000073 2.3e-10 69.3 110 31.8
Thecc.04G255500 Theobroma cacao HOM05D000075 ORTHO05D000073 3.0e-10 68.9 115 30.4
Solyc10g084960.2 Solanum lycopersicum HOM05D000075 ORTHO05D000073 5.1e-10 68.2 115 31.3
Ciclev10006901m.g Citrus clementina HOM05D000075 ORTHO05D000073 6.7e-10 67.8 115 30.4
Eucgr.K03027 Eucalyptus grandis HOM05D000075 ORTHO05D000073 6.7e-10 67.8 109 33.0
FvH4_4g05320 Fragaria vesca HOM05D000075 ORTHO05D000073 6.7e-10 67.8 115 33.0
MD05G1184300 Malus domestica HOM05D000075 ORTHO05D000073 6.7e-10 67.8 112 33.0
CAN.G334.7 Capsicum annuum HOM05D000075 ORTHO05D000073 1.1e-09 67.0 111 34.2
Nitab4.5_0006055g0020 Nicotiana tabacum HOM05D000075 ORTHO05D000073 1.5e-09 66.6 113 33.6
PSO357G0245 Papaver somniferum HOM05D000075 ORTHO05D000073 1.5e-09 66.6 122 31.1
AL3G20390 Arabidopsis lyrata HOM05D000075 ORTHO05D000073 2.0e-09 66.2 121 35.5
CiPaw.02G030200 Carya illinoinensis HOM05D000075 ORTHO05D000073 2.6e-09 65.9 111 31.5
Thecc.04G255600 Theobroma cacao HOM05D000075 ORTHO05D000073 2.6e-09 65.9 109 31.2
CAN.G502.22 Capsicum annuum HOM05D000075 ORTHO05D000073 3.3e-09 65.5 115 30.4
Cfa017297 Carpinus fangiana HOM05D000075 ORTHO05D000073 3.3e-09 65.5 112 34.8
COL.COLO4_06993 Corchorus olitorius HOM05D000075 ORTHO05D000073 4.4e-09 65.1 118 28.0
Hma1.2p1_1241F.1_g269660 Hydrangea macrophylla HOM05D000075 ORTHO05D000073 4.4e-09 65.1 121 29.8
PGR004G1155 Punica granatum HOM05D000075 ORTHO05D000073 4.4e-09 65.1 111 31.5
Cfa017298 Carpinus fangiana HOM05D000075 ORTHO05D000073 5.7e-09 64.7 113 33.6
Ciclev10012710m.g Citrus clementina HOM05D000075 ORTHO05D000073 5.7e-09 64.7 112 31.2
Peaxi162Scf00043g00076 Petunia axillaris HOM05D000075 ORTHO05D000073 5.7e-09 64.7 109 32.1
QL06p022564 Quercus lobata HOM05D000075 ORTHO05D000073 7.4e-09 64.3 118 28.0
FAN13G0271 Fragaria x ananassa HOM05D000075 ORTHO05D000073 9.7e-09 63.9 105 30.5
Hma1.2p1_0671F.1_g200600 Hydrangea macrophylla HOM05D000075 ORTHO05D000073 9.7e-09 63.9 107 34.6
CSS0010169 Camellia sinensis var. sinensis HOM05D000075 ORTHO05D000073 1.3e-08 63.5 118 33.9
CiPaw.02G030300 Carya illinoinensis HOM05D000075 ORTHO05D000073 1.3e-08 63.5 111 30.6
Eucgr.K03030 Eucalyptus grandis HOM05D000075 ORTHO05D000073 1.3e-08 63.5 115 31.3
Aqoxy7G03831 Aquilegia oxysepala HOM05D000075 ORTHO05D000073 1.7e-08 63.2 106 34.0
PGSC0003DMG400011012 Solanum tuberosum HOM05D000075 ORTHO05D000073 1.7e-08 63.2 114 30.7
Prupe.1G039900 Prunus persica HOM05D000075 ORTHO05D000073 2.2e-08 62.8 98 36.7
CARHR083630 Cardamine hirsuta HOM05D000075 ORTHO05D000073 2.8e-08 62.4 122 30.3
CiPaw.10G149700 Carya illinoinensis HOM05D000075 ORTHO05D000073 2.8e-08 62.4 109 35.8
Duzib052G1082 Durio zibethinus HOM05D000075 ORTHO05D000073 2.8e-08 62.4 109 28.4
Sabra10G0044600 Salix brachista HOM05D000075 ORTHO05D000073 2.8e-08 62.4 115 29.6
GSVIVG01034062001 Vitis vinifera HOM05D000075 ORTHO05D000073 2.8e-08 62.4 114 31.6
Hma1.2p1_0671F.1_g200610 Hydrangea macrophylla HOM05D000075 ORTHO05D000073 3.7e-08 62.0 112 29.5
CAN.G812.49 Capsicum annuum HOM05D000075 ORTHO05D000073 4.8e-08 61.6 110 30.0
Cfa017296 Carpinus fangiana HOM05D000075 ORTHO05D000073 4.8e-08 61.6 107 34.6
Ciclev10005841m.g Citrus clementina HOM05D000075 ORTHO05D000073 4.8e-08 61.6 113 24.8
FAN04G2615 Fragaria x ananassa HOM05D000075 ORTHO05D000073 4.8e-08 61.6 115 33.0
Nitab4.5_0001998g0010 Nicotiana tabacum HOM05D000075 ORTHO05D000073 4.8e-08 61.6 113 27.4
RcHm_v2.0_Chr7g0179101 Rosa chinensis HOM05D000075 ORTHO05D000073 4.8e-08 61.6 108 29.6
PGSC0003DMG400002170 Solanum tuberosum HOM05D000075 ORTHO05D000073 4.8e-08 61.6 109 34.9
PGSC0003DMG400002172 Solanum tuberosum HOM05D000075 ORTHO05D000073 4.8e-08 61.6 111 32.4
Potri.010G070900 Populus trichocarpa HOM05D000075 ORTHO05D000073 6.3e-08 61.2 113 29.2
Solyc09g011640.5.1 Solanum lycopersicum HOM05D000075 ORTHO05D000073 6.3e-08 61.2 111 32.4
Cfa017300 Carpinus fangiana HOM05D000075 ORTHO05D000073 8.2e-08 60.8 95 35.8
Eucgr.H03907 Eucalyptus grandis HOM05D000075 ORTHO05D000073 8.2e-08 60.8 114 28.1
FvH4_5g15020 Fragaria vesca HOM05D000075 ORTHO05D000073 8.2e-08 60.8 115 33.0
FAN18G3504 Fragaria x ananassa HOM05D000075 ORTHO05D000073 8.2e-08 60.8 115 33.0
TAR636G2344 Trochodendron aralioides HOM05D000075 ORTHO05D000073 8.2e-08 60.8 97 34.0
AT3G09270 Arabidopsis thaliana HOM05D000075 ORTHO05D000073 1.1e-07 60.5 119 34.5
ECA248G3633 Erigeron canadensis HOM05D000075 ORTHO05D000073 1.1e-07 60.5 106 35.8
Eucgr.B00497 Eucalyptus grandis HOM05D000075 ORTHO05D000073 1.1e-07 60.5 111 31.5
Eucgr.H00154 Eucalyptus grandis HOM05D000075 ORTHO05D000073 1.1e-07 60.5 119 29.4
Solyc09g011550.3 Solanum lycopersicum HOM05D000075 ORTHO05D000073 1.1e-07 60.5 104 32.7
Nitab4.5_0012027g0010 Nicotiana tabacum HOM05D000075 ORTHO05D000073 1.4e-07 60.1 112 32.1
Solyc09g011600.3 Solanum lycopersicum HOM05D000075 ORTHO05D000073 1.4e-07 60.1 105 34.3
PGSC0003DMG400002167 Solanum tuberosum HOM05D000075 ORTHO05D000073 1.4e-07 60.1 104 32.7
QL06p022409 Quercus lobata HOM05D000075 ORTHO05D000073 1.8e-07 59.7 104 29.8
Solyc09g063150.3 Solanum lycopersicum HOM05D000075 ORTHO05D000073 1.8e-07 59.7 107 29.0
Sopen09g025320 Solanum pennellii HOM05D000075 ORTHO05D000073 1.8e-07 59.7 107 29.0
Ciclev10005833m.g Citrus clementina HOM05D000075 ORTHO05D000073 2.4e-07 59.3 114 27.2
Ciclev10006981m.g Citrus clementina HOM05D000075 ORTHO05D000073 2.4e-07 59.3 112 25.9
Hma1.2p1_0671F.1_g200620 Hydrangea macrophylla HOM05D000075 ORTHO05D000073 2.4e-07 59.3 121 27.3
Nn1g03075 Nelumbo nucifera HOM05D000075 ORTHO05D000073 2.4e-07 59.3 115 27.8
Potri.008G175050 Populus trichocarpa HOM05D000075 ORTHO05D000073 2.4e-07 59.3 110 29.1
Eucgr.H03905 Eucalyptus grandis HOM05D000075 ORTHO05D000073 3.1e-07 58.9 113 26.5
Glyma.05G161500 Glycine max HOM05D000075 ORTHO05D000073 4.1e-07 58.5 115 30.4
Eucgr.H00157 Eucalyptus grandis HOM05D000075 ORTHO05D000073 5.3e-07 58.2 117 26.5
Nn3g19847 Nelumbo nucifera HOM05D000075 ORTHO05D000073 5.3e-07 58.2 112 29.5
Sopen09g006450 Solanum pennellii HOM05D000075 ORTHO05D000073 5.3e-07 58.2 111 30.6
EL10Ac7g18101 Beta vulgaris HOM05D000075 ORTHO05D000073 7.0e-07 57.8 114 31.6
BcaC09g48015 Brassica carinata HOM05D000075 ORTHO05D000073 7.0e-07 57.8 107 30.8
CiPaw.10G149800 Carya illinoinensis HOM05D000075 ORTHO05D000073 7.0e-07 57.8 108 33.3
Sabra10G0045000 Salix brachista HOM05D000075 ORTHO05D000073 7.0e-07 57.8 112 30.4
ATR0564G163 Amborella trichopoda HOM05D000075 ORTHO05D000073 9.1e-07 57.4 112 33.9
ATR0564G444 Amborella trichopoda HOM05D000075 ORTHO05D000073 9.1e-07 57.4 129 31.8
Peaxi162Scf00132g00912 Petunia axillaris HOM05D000075 ORTHO05D000073 9.1e-07 57.4 100 28.0
COL.COLO4_06986 Corchorus olitorius HOM05D000075 ORTHO05D000073 1.2e-06 57.0 109 29.4
MD13G1227600 Malus domestica HOM05D000075 ORTHO05D000073 1.2e-06 57.0 117 29.1
Nitab4.5_0000451g0140 Nicotiana tabacum HOM05D000075 ORTHO05D000073 1.2e-06 57.0 119 27.7
PGSC0003DMG400002168 Solanum tuberosum HOM05D000075 ORTHO05D000073 1.2e-06 57.0 101 31.7
Zm00001eb141020 Zea mays HOM05D000075 ORTHO05D000073 1.2e-06 57.0 121 28.1
BolC1t05466H Brassica oleracea HOM05D000075 ORTHO05D000073 1.5e-06 56.6 107 29.9
Cfa002209 Carpinus fangiana HOM05D000075 ORTHO05D000073 1.5e-06 56.6 107 30.8
COL.COLO4_14686 Corchorus olitorius HOM05D000075 ORTHO05D000073 1.5e-06 56.6 111 29.7
DCAR_024049 Daucus carota HOM05D000075 ORTHO05D000073 1.5e-06 56.6 103 31.1
Thhalv10021472m.g Eutrema salsugineum HOM05D000075 ORTHO05D000073 1.5e-06 56.6 111 30.6
RcHm_v2.0_Chr7g0181241 Rosa chinensis HOM05D000075 ORTHO05D000073 1.5e-06 56.6 79 36.7
Sopen09g006370 Solanum pennellii HOM05D000075 ORTHO05D000073 1.5e-06 56.6 105 33.3
Duzib212G0517 Durio zibethinus HOM05D000075 ORTHO05D000073 2.0e-06 56.2 116 26.7
FAN08G0390 Fragaria x ananassa HOM05D000075 ORTHO05D000073 2.0e-06 56.2 99 35.4
Lj1C78T0 Lonicera japonica HOM05D000075 ORTHO05D000073 2.0e-06 56.2 110 30.0
AUR62025684 Chenopodium quinoa HOM05D000075 ORTHO05D000073 2.6e-06 55.8 118 30.5
Nitab4.5_0027463g0010 Nicotiana tabacum HOM05D000075 ORTHO05D000073 2.6e-06 55.8 117 27.4
BraA01t04307Z Brassica rapa HOM05D000075 ORTHO05D000073 4.5e-06 55.1 107 29.0
AUR62001302 Chenopodium quinoa HOM05D000075 ORTHO05D000073 5.9e-06 54.7 118 29.7
Sc12g0006350 Simmondsia chinensis HOM05D000075 ORTHO05D000073 5.9e-06 54.7 118 28.8
Sopen09g006350 Solanum pennellii HOM05D000075 ORTHO05D000073 7.7e-06 54.3 101 31.7


User provided reference genes

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