Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0620G130 Amborella trichopoda HOM05D003313 ORTHO05D004217 9.1e-139 496.9 250 100.0
ATR0620G123 Amborella trichopoda HOM05D003313 ORTHO05D004217 6.9e-86 321.2 206 83.5
Aqoxy1G01346 Aquilegia oxysepala HOM05D003313 ORTHO05D004217 5.1e-57 225.3 231 56.7
Prupe.8G187800 Prunus persica HOM05D003313 ORTHO05D004217 1.5e-56 223.8 208 58.2
Potri.006G081800 Populus trichocarpa HOM05D003313 ORTHO05D004217 3.3e-56 222.6 208 58.7
TAR624G0023 Trochodendron aralioides HOM05D003313 ORTHO05D004217 5.7e-56 221.9 231 55.4
TAR624G1107 Trochodendron aralioides HOM05D003313 ORTHO05D004217 5.7e-56 221.9 231 55.4
GSVIVG01029823001 Vitis vinifera HOM05D003313 ORTHO05D004217 9.6e-56 221.1 208 58.7
Sabra06G0061800 Salix brachista HOM05D003313 ORTHO05D004217 1.3e-55 220.7 208 58.2
Dinv30970 Davidia involucrata HOM05D003313 ORTHO05D004217 1.6e-55 220.3 208 58.2
MD05G1154700 Malus domestica HOM05D003313 ORTHO05D004217 1.6e-55 220.3 211 58.3
MD10G1148800 Malus domestica HOM05D003313 ORTHO05D004217 1.6e-55 220.3 211 58.3
Nn3g20244 Nelumbo nucifera HOM05D003313 ORTHO05D004217 1.6e-55 220.3 228 54.4
CSS0016348 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.1e-54 217.6 208 58.2
CSS0044155 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.1e-54 217.6 208 58.2
QL11p018449 Quercus lobata HOM05D003313 ORTHO05D004217 1.4e-54 217.2 208 56.7
CANSAT01G1610 Cannabis sativa HOM05D003313 ORTHO05D004217 1.8e-54 216.9 228 53.1
Actinidia17722 Actinidia chinensis HOM05D003313 ORTHO05D004217 3.1e-54 216.1 208 57.2
DCAR_029787 Daucus carota HOM05D003313 ORTHO05D004217 3.1e-54 216.1 251 51.8
RcHm_v2.0_Chr6g0282501 Rosa chinensis HOM05D003313 ORTHO05D004217 5.3e-54 215.3 208 56.2
Rhsim11G0111700 Rhododendron simsii HOM05D003313 ORTHO05D004217 6.9e-54 214.9 208 55.8
CSS0008361 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-53 214.2 208 58.2
CSS0011425 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-53 214.2 208 58.2
Atru.chr3.2031 Acer truncatum HOM05D003313 ORTHO05D004217 1.5e-53 213.8 208 56.2
Lsat_1_v5_gn_7_68120 Lactuca sativa HOM05D003313 ORTHO05D004217 2.0e-53 213.4 208 56.2
Cfa004406 Carpinus fangiana HOM05D003313 ORTHO05D004217 3.4e-53 212.6 207 57.0
EL10Ac3g07331 Beta vulgaris HOM05D003313 ORTHO05D004217 4.5e-53 212.2 208 58.7
PSO541G4460 Papaver somniferum HOM05D003313 ORTHO05D004217 4.5e-53 212.2 226 54.9
HanXRQChr15g0468281 Helianthus annuus HOM05D003313 ORTHO05D004217 5.9e-53 211.8 208 56.7
vmacro01644 Vaccinium macrocarpon HOM05D003313 ORTHO05D004217 7.6e-53 211.5 208 56.2
arahy.Tifrunner.gnm1.ann1.9JB77L Arachis hypogaea HOM05D003313 ORTHO05D004217 1.0e-52 211.1 208 57.7
arahy.Tifrunner.gnm1.ann1.XWZQ7T Arachis hypogaea HOM05D003313 ORTHO05D004217 1.0e-52 211.1 208 57.7
FAN15G1274 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.0e-52 211.1 208 55.8
PSO675G1011 Papaver somniferum HOM05D003313 ORTHO05D004217 1.0e-52 211.1 224 53.6
THA.LOC104814960 Tarenaya hassleriana HOM05D003313 ORTHO05D004217 1.0e-52 211.1 208 57.2
Eucgr.B01361 Eucalyptus grandis HOM05D003313 ORTHO05D004217 1.3e-52 210.7 209 57.4
Medtr7g111080 Medicago truncatula HOM05D003313 ORTHO05D004217 1.7e-52 210.3 223 52.5
Ciclev10018511m.g Citrus clementina HOM05D003313 ORTHO05D004217 2.2e-52 209.9 208 55.8
MELO3C021123.2 Cucumis melo HOM05D003313 ORTHO05D004217 2.2e-52 209.9 206 54.9
FvH4_2g17560 Fragaria vesca HOM05D003313 ORTHO05D004217 2.2e-52 209.9 208 55.3
FAN27G0645 Fragaria x ananassa HOM05D003313 ORTHO05D004217 2.2e-52 209.9 208 55.3
FAN27G0740 Fragaria x ananassa HOM05D003313 ORTHO05D004217 2.2e-52 209.9 208 55.3
Lj1g0026129 Lotus japonicus HOM05D003313 ORTHO05D004217 2.2e-52 209.9 208 56.2
TPR.G8371 Trifolium pratense HOM05D003313 ORTHO05D004217 2.2e-52 209.9 208 56.2
Ca_09260_v3 Cicer arietinum L. HOM05D003313 ORTHO05D004217 3.8e-52 209.1 208 55.8
ECA240G0535 Erigeron canadensis HOM05D003313 ORTHO05D004217 3.8e-52 209.1 208 54.8
Manes.11G105500 Manihot esculenta HOM05D003313 ORTHO05D004217 3.8e-52 209.1 208 55.3
Os01g0653800 Oryza sativa ssp. japonica HOM05D003313 ORTHO05D004217 3.8e-52 209.1 223 53.4
CiPaw.01G000400 Carya illinoinensis HOM05D003313 ORTHO05D004217 5.0e-52 208.8 206 56.3
CsaV3_7G026710 Cucumis sativus L. HOM05D003313 ORTHO05D004217 6.5e-52 208.4 206 54.4
MBI07_g10943_MAGBIO Magnolia biondii HOM05D003313 ORTHO05D004217 6.5e-52 208.4 228 53.9
Sp2g22700 Schrenkiella parvula HOM05D003313 ORTHO05D004217 6.5e-52 208.4 209 56.5
Sc10g0005440 Simmondsia chinensis HOM05D003313 ORTHO05D004217 6.5e-52 208.4 208 57.7
VMungo1383G1216 Vigna mungo HOM05D003313 ORTHO05D004217 6.5e-52 208.4 208 56.7
Ah.13g077320 Amaranthus hybridus HOM05D003313 ORTHO05D004217 8.5e-52 208.0 268 48.1
FAN24G1237 Fragaria x ananassa HOM05D003313 ORTHO05D004217 8.5e-52 208.0 208 55.3
Psat3g015640 Pisum sativum HOM05D003313 ORTHO05D004217 1.4e-51 207.2 208 54.3
Phvul.001G220300 Phaseolus vulgaris HOM05D003313 ORTHO05D004217 1.9e-51 206.8 207 56.5
Hund24556 Selenicereus undatus HOM05D003313 ORTHO05D004217 1.9e-51 206.8 220 53.6
Thecc.09G202800 Theobroma cacao HOM05D003313 ORTHO05D004217 1.9e-51 206.8 206 55.3
AUR62018429 Chenopodium quinoa HOM05D003313 ORTHO05D004217 3.2e-51 206.1 208 58.2
AUR62021005 Chenopodium quinoa HOM05D003313 ORTHO05D004217 3.2e-51 206.1 208 58.2
Glyma.03G226400 Glycine max HOM05D003313 ORTHO05D004217 4.2e-51 205.7 208 56.7
AT5G24710 Arabidopsis thaliana HOM05D003313 ORTHO05D004217 5.5e-51 205.3 208 55.8
Sed0021054 Sechium edule HOM05D003313 ORTHO05D004217 7.2e-51 204.9 206 53.9
CARHR188770 Cardamine hirsuta HOM05D003313 ORTHO05D004217 9.3e-51 204.5 208 55.8
Duzib150G0949 Durio zibethinus HOM05D003313 ORTHO05D004217 9.3e-51 204.5 206 55.3
Glyma.19G223400 Glycine max HOM05D003313 ORTHO05D004217 9.3e-51 204.5 208 56.2
Lalb_Chr18g0046271 Lupinus albus HOM05D003313 ORTHO05D004217 9.3e-51 204.5 209 57.4
Oeu016865.1 Olea europaea HOM05D003313 ORTHO05D004217 9.3e-51 204.5 208 54.8
Carub.0006s2256 Capsella rubella HOM05D003313 ORTHO05D004217 1.2e-50 204.1 208 55.8
SGA_v2.0_scaffold311G48230 Striga asiatica HOM05D003313 ORTHO05D004217 1.6e-50 203.8 208 53.8
Zm00001eb359400 Zea mays HOM05D003313 ORTHO05D004217 1.6e-50 203.8 223 51.6
Gorai.004G096900 Gossypium raimondii HOM05D003313 ORTHO05D004217 2.1e-50 203.4 206 53.9
Nitab4.5_0004090g0090 Nicotiana tabacum HOM05D003313 ORTHO05D004217 2.7e-50 203.0 208 55.3
AL6G36310 Arabidopsis lyrata HOM05D003313 ORTHO05D004217 3.6e-50 202.6 208 55.3
Lalb_Chr15g0077831 Lupinus albus HOM05D003313 ORTHO05D004217 3.6e-50 202.6 209 57.9
MSTRG.27897 Avicennia marina HOM05D003313 ORTHO05D004217 4.6e-50 202.2 208 53.4
SalBow4G0229 Salvia bowleyana HOM05D003313 ORTHO05D004217 4.6e-50 202.2 208 52.9
SalBow4G1329 Salvia bowleyana HOM05D003313 ORTHO05D004217 4.6e-50 202.2 208 52.9
Gohir.A08G082000 Gossypium hirsutum HOM05D003313 ORTHO05D004217 6.1e-50 201.8 206 53.4
unitig_699.g19829 Utricularia gibba HOM05D003313 ORTHO05D004217 6.1e-50 201.8 208 54.8
Aa31LG11G3950 Aethionema arabicum HOM05D003313 ORTHO05D004217 7.9e-50 201.4 208 54.3
BcaNung07352 Brassica carinata HOM05D003313 ORTHO05D004217 1.0e-49 201.1 208 54.8
A06p35540 Brassica napus HOM05D003313 ORTHO05D004217 1.0e-49 201.1 208 54.3
BraA06t26479Z Brassica rapa HOM05D003313 ORTHO05D004217 1.0e-49 201.1 208 54.3
Cc02_g36830 Coffea canephora HOM05D003313 ORTHO05D004217 1.0e-49 201.1 207 55.1
C07p43000 Brassica napus HOM05D003313 ORTHO05D004217 1.3e-49 200.7 208 53.8
BolC7t44829H Brassica oleracea HOM05D003313 ORTHO05D004217 1.3e-49 200.7 208 53.8
Thhalv10003520m.g Eutrema salsugineum HOM05D003313 ORTHO05D004217 1.3e-49 200.7 208 54.3
BcaNung01252 Brassica carinata HOM05D003313 ORTHO05D004217 1.8e-49 200.3 208 53.4
Gohir.D08G091400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 1.8e-49 200.3 206 52.9
BcaC04g23548 Brassica carinata HOM05D003313 ORTHO05D004217 5.1e-49 198.7 208 54.8
A09p06410 Brassica napus HOM05D003313 ORTHO05D004217 8.7e-49 198.0 208 54.8
C09p07140 Brassica napus HOM05D003313 ORTHO05D004217 8.7e-49 198.0 208 54.8
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 8.7e-49 198.0 208 54.8
BraA09t36285Z Brassica rapa HOM05D003313 ORTHO05D004217 8.7e-49 198.0 208 54.8
HPP92_021469 Vanilla planifolia HOM05D003313 ORTHO05D004217 8.7e-49 198.0 221 52.5
Lj5C312G5 Lonicera japonica HOM05D003313 ORTHO05D004217 3.3e-48 196.1 243 47.3
Solyc01g102510.4 Solanum lycopersicum HOM05D003313 ORTHO05D004217 5.7e-48 195.3 208 52.9
Peaxi162Scf00071g00133 Petunia axillaris HOM05D003313 ORTHO05D004217 7.4e-48 194.9 245 44.9
Zm00001eb158110 Zea mays HOM05D003313 ORTHO05D004217 1.3e-47 194.1 203 53.2
CAN.G1379.33 Capsicum annuum HOM05D003313 ORTHO05D004217 1.6e-47 193.7 208 52.9
Migut.B00692 Erythranthe guttata HOM05D003313 ORTHO05D004217 1.6e-47 193.7 208 51.0
Sopen01g044950 Solanum pennellii HOM05D003313 ORTHO05D004217 1.6e-47 193.7 208 52.4
PGSC0003DMG400018227 Solanum tuberosum HOM05D003313 ORTHO05D004217 1.6e-47 193.7 208 52.4
Hund19080 Selenicereus undatus HOM05D003313 ORTHO05D004217 2.8e-47 193.0 226 51.8
Lj9C240T5 Lonicera japonica HOM05D003313 ORTHO05D004217 6.3e-47 191.8 231 49.4
TWI38G1822 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 1.4e-46 190.7 188 55.9
SEGI_06427 Sequoiadendron giganteum HOM05D003313 ORTHO05D004217 1.2e-45 187.6 211 52.6
ClCG09G008380 Citrullus lanatus HOM05D003313 ORTHO05D004217 8.5e-44 181.4 270 41.9
Nitab4.5_0000399g0070 Nicotiana tabacum HOM05D003313 ORTHO05D004217 2.7e-42 176.4 190 53.2
Haze_14998 Corylus avellana HOM05D003313 ORTHO05D004217 5.7e-40 168.7 172 54.7
Mapoly0031s0124 Marchantia polymorpha HOM05D003313 ORTHO05D004217 4.8e-39 165.6 229 45.0
Sc10g0006280 Simmondsia chinensis HOM05D003313 ORTHO05D004217 4.8e-39 165.6 173 55.5
Actinidia11708 Actinidia chinensis HOM05D003313 ORTHO05D004217 3.1e-38 162.9 105 76.2
Hund25753 Selenicereus undatus HOM05D003313 ORTHO05D004217 1.5e-37 160.6 106 77.4
Peaxi162Scf00194g00629 Petunia axillaris HOM05D003313 ORTHO05D004217 3.4e-37 159.5 188 49.5
SMO116G0300 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 5.9e-37 158.7 203 44.8
AagrBONN_evm.TU.Sc2ySwM_228.3123 Anthoceros agrestis HOM05D003313 ORTHO05D004217 6.5e-36 155.2 212 47.2
Gohir.A08G016300 Gossypium hirsutum HOM05D003313 ORTHO05D004217 3.2e-35 152.9 105 72.4
TWI39G0913 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 5.5e-35 152.1 105 69.5
Gohir.D08G026400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 3.6e-34 149.4 106 70.8
Gorai.004G022900 Gossypium raimondii HOM05D003313 ORTHO05D004217 3.6e-34 149.4 106 70.8
COL.COLO4_07112 Corchorus olitorius HOM05D003313 ORTHO05D004217 1.5e-32 144.1 201 45.3
Pp3c1_36370 Physcomitrium patens HOM05D003313 ORTHO05D004217 1.1e-30 137.9 200 45.5
Hma1.2p1_0052F.1_g030180 Hydrangea macrophylla HOM05D003313 ORTHO05D004217 2.9e-28 129.8 145 51.0
SHI06529 Sapria himalayana HOM05D003313 ORTHO05D004217 1.7e-20 104.0 181 39.2
CBR_g3034 Chara braunii HOM05D003313 ORTHO05D004217 5.7e-16 89.0 205 33.7
Cpa.g.sc17.17 Carica papaya HOM05D003313 ORTHO05D004217 1.7e-12 77.4 43 83.7
Os01g0653350 Oryza sativa ssp. japonica HOM05D003313 ORTHO05D004217 3.8e-12 76.3 64 60.9
Cpa.g.sc17.18 Carica papaya HOM05D003313 ORTHO05D004217 1.2e-10 71.2 72 55.6
CBR_g53812 Chara braunii HOM05D003313 ORTHO05D004217 4.7e-10 69.3 61 49.2
Cpa.g.sc17.16 Carica papaya HOM05D003313 ORTHO05D004217 4.4e-08 62.8 42 69.0


User provided reference genes

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