Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.8e-176 622.5 311 100.0
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 2.7e-92 342.8 312 60.3
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.6e-90 336.3 324 57.1
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 5.7e-90 335.1 247 67.6
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 9.7e-90 334.3 248 67.7
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 4.8e-89 332.0 293 59.7
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 6.3e-89 331.6 255 65.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.8e-88 330.1 271 63.8
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.8e-88 330.1 257 67.3
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 4.1e-88 328.9 295 60.3
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.6e-87 327.0 274 62.4
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 2.6e-87 326.2 295 58.0
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.5e-87 325.9 274 62.0
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 4.5e-87 325.5 254 64.6
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.7e-86 323.6 268 63.1
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 2.2e-86 323.2 293 58.4
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 2.2e-86 323.2 280 60.7
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 2.9e-86 322.8 249 66.3
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 3.8e-86 322.4 284 60.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.8e-86 322.4 274 61.3
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 8.5e-86 321.2 284 59.2
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.5e-85 320.5 255 63.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.5e-85 320.5 249 65.1
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.9e-85 320.1 248 64.9
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.9e-85 320.1 251 64.9
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 2.5e-85 319.7 311 57.6
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 3.2e-85 319.3 249 63.9
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.2e-85 318.9 247 65.6
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 4.2e-85 318.9 275 60.0
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 5.5e-85 318.5 241 66.4
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 5.5e-85 318.5 312 56.7
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.2e-84 317.4 249 63.9
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.2e-84 317.4 303 57.1
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.6e-84 317.0 294 57.5
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 2.7e-84 316.2 248 65.3
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 3.6e-84 315.8 223 70.4
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 3.6e-84 315.8 259 62.9
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 8.0e-84 314.7 307 54.4
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.4e-83 313.9 291 56.4
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 2.3e-83 313.2 249 64.7
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 3.0e-83 312.8 307 55.7
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 4.0e-83 312.4 297 56.6
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 4.0e-83 312.4 293 58.0
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 8.8e-83 311.2 310 56.5
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.5e-82 310.5 305 56.1
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.5e-82 310.5 247 64.0
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 3.4e-82 309.3 248 63.3
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 5.7e-82 308.5 289 57.4
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.7e-82 308.5 255 62.0
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 7.5e-82 308.1 250 62.4
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 7.5e-82 308.1 284 58.5
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 9.7e-82 307.8 246 61.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.8e-81 306.2 278 57.9
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 2.8e-81 306.2 250 64.4
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 2.8e-81 306.2 248 62.9
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 2.8e-81 306.2 248 63.3
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 4.8e-81 305.4 246 61.4
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.1e-80 304.3 242 64.5
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.1e-80 304.3 311 54.0
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 4.1e-80 302.4 259 60.2
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 4.1e-80 302.4 298 55.4
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.3e-80 302.0 255 62.7
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 5.3e-80 302.0 222 68.9
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 7.0e-80 301.6 267 58.1
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.0e-80 301.6 223 66.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 9.1e-80 301.2 247 59.9
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 9.1e-80 301.2 265 60.0
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.2e-79 300.8 289 55.7
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.6e-79 300.4 248 60.9
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.6e-79 300.4 248 60.9
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 7.7e-79 298.1 261 60.5
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 1.0e-78 297.7 281 54.8
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.0e-78 297.7 283 54.8
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.2e-78 296.6 290 56.2
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.9e-78 296.2 283 55.8
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.9e-78 296.2 235 64.3
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 3.8e-78 295.8 250 59.6
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 3.8e-78 295.8 250 59.6
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 6.5e-78 295.0 312 52.9
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 6.5e-78 295.0 247 59.9
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 6.5e-78 295.0 247 59.9
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 6.5e-78 295.0 243 62.6
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 6.5e-78 295.0 223 65.5
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 8.5e-78 294.7 247 59.1
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.5e-77 293.9 247 58.3
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.5e-77 293.9 235 63.0
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.9e-77 293.5 270 57.0
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 2.5e-77 293.1 223 66.8
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 9.4e-77 291.2 295 53.2
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.2e-76 290.8 230 65.7
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-75 287.7 226 62.8
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.4e-75 287.3 223 65.5
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-75 286.6 239 60.3
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-75 286.6 239 60.3
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.2e-74 284.3 237 62.4
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 2.0e-74 283.5 239 61.1
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 3.1e-72 276.2 221 61.5
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 7.7e-71 271.6 244 59.4
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 7.2e-69 265.0 229 59.8
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.3e-67 260.0 229 60.7
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 3.4e-66 256.1 198 68.2
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 2.5e-61 240.0 250 51.2
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.8e-60 236.5 220 54.5
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 8.0e-60 235.0 186 65.6
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 5.2e-59 232.3 162 67.9
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 5.2e-59 232.3 240 53.8
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.7e-57 227.3 226 54.4
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.2e-55 221.1 238 49.2
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 3.5e-55 219.5 176 65.9
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 6.0e-55 218.8 248 48.0
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.0e-54 218.0 148 70.9
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 5.0e-54 215.7 173 65.3
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.4e-51 207.6 229 49.3
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.2e-50 204.5 248 48.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 5.6e-45 185.7 215 44.2
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 7.6e-42 175.3 135 65.9
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 7.8e-39 165.2 130 63.8
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.5e-34 151.0 172 47.1
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.2e-33 147.1 210 43.8
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.3e-22 111.3 74 68.9
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.3e-19 99.4 135 45.2
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 1.8e-06 57.8 58 53.4


User provided reference genes

Program Settings