Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 5.8e-206 720.7 372 100.0
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 4.6e-102 375.6 365 58.4
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 3.0e-101 372.9 346 59.0
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.1e-100 370.9 335 60.6
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 9.5e-100 367.9 375 58.4
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.6e-99 367.1 297 64.6
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.8e-99 366.3 345 59.7
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 3.6e-99 365.9 280 67.5
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 4.7e-99 365.5 285 66.3
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 4.7e-99 365.5 356 57.0
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 6.2e-99 365.2 334 60.2
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 6.2e-99 365.2 369 58.3
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 1.0e-98 364.4 277 66.8
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 1.4e-98 364.0 377 57.6
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 1.4e-98 364.0 351 60.4
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 1.8e-98 363.6 365 58.1
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 2.3e-98 363.2 342 60.8
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 6.8e-98 361.7 344 59.3
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 1.2e-97 360.9 338 57.7
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 1.2e-97 360.9 362 57.5
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 1.2e-97 360.9 294 64.6
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 3.4e-97 359.4 291 64.6
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 3.4e-97 359.4 303 63.0
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 4.4e-97 359.0 324 59.3
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 4.4e-97 359.0 345 58.8
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 4.4e-97 359.0 360 58.6
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 7.5e-97 358.2 293 64.2
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 7.5e-97 358.2 338 58.9
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 7.5e-97 358.2 349 58.5
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 9.8e-97 357.8 343 59.5
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 1.7e-96 357.1 354 58.8
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 2.2e-96 356.7 289 61.9
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 2.2e-96 356.7 282 67.0
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 2.9e-96 356.3 280 66.8
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 4.9e-96 355.5 349 58.2
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 4.9e-96 355.5 291 64.3
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 4.9e-96 355.5 288 63.2
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 1.1e-95 354.4 293 64.2
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 1.4e-95 354.0 304 61.2
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.9e-95 353.6 336 60.4
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 2.4e-95 353.2 284 64.8
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 2.4e-95 353.2 375 54.4
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 3.2e-95 352.8 348 57.8
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 5.4e-95 352.1 376 53.5
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 5.4e-95 352.1 254 68.9
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 5.4e-95 352.1 361 53.2
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 5.4e-95 352.1 354 57.6
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 7.0e-95 351.7 335 57.0
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 4.6e-94 349.0 295 63.1
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 1.0e-93 347.8 344 56.4
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.7e-93 347.1 335 57.6
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 2.3e-93 346.7 363 54.8
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 3.9e-93 345.9 264 68.9
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 3.9e-93 345.9 292 61.0
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 5.0e-93 345.5 330 58.8
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 6.6e-93 345.1 339 56.0
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.1e-92 344.4 336 57.1
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.1e-92 344.4 363 53.2
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 3.3e-92 342.8 354 55.1
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 3.3e-92 342.8 360 55.3
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 3.3e-92 342.8 334 56.9
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 7.3e-92 341.7 344 56.4
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 7.3e-92 341.7 371 53.9
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 2.1e-91 340.1 360 55.3
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 2.8e-91 339.7 361 55.1
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 8.1e-91 338.2 378 53.4
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 8.1e-91 338.2 345 55.9
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 1.1e-90 337.8 344 55.5
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 1.1e-90 337.8 344 55.5
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 1.1e-90 337.8 344 55.5
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.1e-90 337.8 378 54.2
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 1.4e-90 337.4 371 53.4
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.1e-90 336.3 362 54.1
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 2.0e-89 333.6 376 51.6
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 2.0e-89 333.6 344 57.0
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 2.6e-89 333.2 259 63.7
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 1.7e-88 330.5 279 60.2
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.4e-87 327.4 256 61.7
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.9e-87 327.0 331 55.0
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 2.4e-87 326.6 269 61.7
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 5.4e-87 325.5 273 61.9
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 9.2e-87 324.7 255 61.2
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 1.0e-85 321.2 260 63.5
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.5e-84 317.4 254 59.8
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.3e-84 315.8 264 59.5
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 3.6e-83 312.8 355 50.7
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.2e-81 307.8 355 50.7
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.6e-81 306.6 264 58.0
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 7.6e-81 305.1 281 59.4
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 9.9e-81 304.7 325 51.4
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 4.9e-80 302.4 266 57.1
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.4e-79 300.1 264 56.1
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 1.6e-78 297.4 274 55.5
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 6.6e-77 292.0 241 63.5
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 8.6e-77 291.6 264 53.0
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 8.6e-77 291.6 264 53.0
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.1e-76 291.2 267 55.1
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 1.1e-76 291.2 347 50.4
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 4.3e-76 289.3 289 52.6
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 4.3e-76 289.3 246 63.8
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 5.6e-76 288.9 267 55.1
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 9.6e-76 288.1 270 54.1
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.6e-75 287.3 274 54.0
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 2.8e-75 286.6 266 53.8
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 2.8e-75 286.6 267 55.1
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 1.8e-74 283.9 276 50.0
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 1.8e-74 283.9 259 54.4
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 3.1e-74 283.1 262 52.3
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 5.2e-74 282.3 272 50.4
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 5.2e-74 282.3 229 60.3
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 5.2e-74 282.3 259 59.5
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 9.0e-74 281.6 262 51.9
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 9.0e-74 281.6 249 61.8
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.5e-73 280.8 248 61.7
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.5e-73 280.8 259 53.7
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 5.8e-73 278.9 257 53.7
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 7.6e-73 278.5 286 51.4
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-72 277.3 264 51.1
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-72 277.3 264 51.1
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 2.9e-72 276.6 262 51.5
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 3.8e-72 276.2 254 54.3
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 1.1e-71 274.6 249 59.8
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 2.4e-71 273.5 250 54.4
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 3.9e-69 266.2 254 51.6
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 4.8e-67 259.2 262 50.8
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.5e-65 254.2 230 53.9
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 4.5e-65 252.7 230 52.2
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.2e-63 246.1 243 53.1
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.4e-63 245.7 249 51.8
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 5.4e-63 245.7 177 67.2
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 1.6e-62 244.2 188 64.4
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 4.6e-62 242.7 166 66.9
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 6.0e-62 242.3 264 50.4
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.8e-58 230.7 226 51.3
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 9.0e-58 228.4 268 45.5
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 1.2e-57 228.0 268 45.1
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 1.9e-52 210.7 189 58.2
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-50 204.5 267 45.7
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 5.3e-50 202.6 400 36.0
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.6e-49 200.3 181 55.8
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.3e-48 198.0 190 51.1
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 3.8e-48 196.4 284 40.8
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.1e-47 194.9 279 44.1
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.3e-40 171.4 157 54.8
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 8.5e-40 168.7 166 50.6
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.1e-38 164.1 132 62.1
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 1.8e-34 151.0 234 37.6
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.4e-34 150.6 138 60.9
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 5.3e-34 149.4 240 40.0
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 8.5e-32 142.1 197 45.2
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.1e-28 131.7 204 38.7
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 9.1e-26 122.1 132 53.8
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 4.4e-20 103.2 213 34.3
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 2.2e-19 100.9 241 32.4
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 4.8e-19 99.8 95 53.7
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 6.3e-19 99.4 181 34.3
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.8e-18 97.8 69 69.6
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.4e-18 97.4 249 29.3
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 3.5e-17 93.6 109 43.1
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 4.2e-15 86.7 65 64.6
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 5.5e-15 86.3 84 58.3
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 1.8e-13 81.3 94 55.3
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 5.7e-12 76.3 68 58.8
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 7.5e-12 75.9 66 53.0
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 8.2e-11 72.4 105 43.8
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 1.4e-10 71.6 77 50.6
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 6.5e-08 62.8 88 42.0
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 1.5e-07 61.6 99 45.5
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 9.4e-07 58.9 60 53.3


User provided reference genes

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