Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 6.8e-240 833.6 412 100.0
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 5.2e-139 498.4 407 60.7
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 2.4e-136 489.6 414 58.9
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 5.3e-136 488.4 414 59.4
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 1.2e-135 487.3 406 60.3
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 1.2e-135 487.3 411 58.9
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.6e-135 486.9 407 59.7
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 1.6e-135 486.9 406 61.1
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.3e-134 483.8 407 59.5
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 3.8e-134 482.3 408 59.1
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 3.8e-134 482.3 405 60.0
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 5.0e-134 481.9 407 59.5
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 5.0e-134 481.9 406 59.9
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 6.5e-134 481.5 409 60.6
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 1.5e-133 480.3 425 59.3
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.5e-133 480.3 406 59.9
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 5.5e-133 478.4 406 60.8
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 1.6e-132 476.9 407 59.2
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 3.6e-132 475.7 411 59.6
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 6.1e-132 474.9 410 60.2
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 8.0e-132 474.6 405 59.8
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 8.0e-132 474.6 404 60.6
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 1.4e-131 473.8 405 59.8
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.3e-131 473.0 409 58.9
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 5.2e-131 471.9 406 59.6
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 5.2e-131 471.9 409 58.9
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 6.8e-131 471.5 407 57.7
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 1.2e-130 470.7 408 58.8
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.2e-130 470.7 406 58.4
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 2.0e-130 469.9 406 59.4
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.6e-130 469.5 415 59.5
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 3.4e-130 469.2 415 60.0
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.4e-130 469.2 414 58.5
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 4.4e-130 468.8 414 58.9
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.7e-129 466.8 406 58.1
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.2e-129 466.5 408 57.6
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 2.2e-129 466.5 405 58.5
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 4.8e-129 465.3 416 58.4
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.1e-128 464.2 413 59.6
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.8e-128 463.4 407 56.8
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 1.8e-128 463.4 407 58.2
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 2.4e-128 463.0 406 58.1
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.4e-128 463.0 415 58.1
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 3.1e-128 462.6 409 57.2
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.1e-128 462.6 405 57.5
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 4.1e-128 462.2 412 56.6
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 5.4e-128 461.8 411 57.9
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.2e-127 460.7 415 57.3
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 2.0e-127 459.9 414 57.7
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 7.7e-127 458.0 419 56.1
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 7.7e-127 458.0 409 56.7
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 7.7e-127 458.0 412 58.3
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.3e-126 457.2 414 57.5
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 1.7e-126 456.8 416 57.5
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 3.8e-126 455.7 408 57.1
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 6.5e-126 454.9 415 56.6
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 6.5e-126 454.9 407 58.7
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 8.5e-126 454.5 412 56.8
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 1.1e-125 454.1 403 56.1
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 1.1e-125 454.1 406 57.9
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 1.1e-125 454.1 409 57.5
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 1.9e-125 453.4 408 56.4
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.9e-125 453.4 421 57.2
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 2.5e-125 453.0 414 56.5
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 4.2e-125 452.2 415 56.6
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 4.2e-125 452.2 415 56.6
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.6e-124 450.3 407 56.3
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.6e-124 450.3 419 56.3
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 2.1e-124 449.9 431 54.5
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 2.7e-124 449.5 403 55.6
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 3.6e-124 449.1 414 56.8
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 8.0e-124 448.0 404 56.2
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.0e-123 447.6 413 57.1
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 4.0e-123 445.7 414 56.5
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 5.2e-123 445.3 406 56.4
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 6.8e-123 444.9 401 56.9
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 6.8e-123 444.9 413 56.4
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 3.4e-122 442.6 399 55.9
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 1.4e-120 437.2 414 55.8
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 2.4e-120 436.4 429 54.3
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 3.1e-120 436.0 404 55.2
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 5.4e-120 435.3 421 55.3
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 7.2e-117 424.9 446 52.0
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 7.2e-117 424.9 446 52.0
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 9.5e-117 424.5 489 49.9
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.8e-115 418.3 407 53.6
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 6.8e-115 418.3 369 58.8
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.0e-114 416.8 387 54.0
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 3.4e-114 416.0 411 53.5
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 1.3e-113 414.1 372 55.6
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.3e-113 414.1 397 56.9
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 2.9e-113 412.9 403 54.6
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 6.4e-113 411.8 403 55.3
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 2.3e-110 403.3 404 54.2
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.1e-109 401.0 396 52.3
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 7.3e-109 398.3 401 53.1
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 7.3e-109 398.3 350 57.7
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.0e-107 394.4 398 52.3
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 1.4e-107 394.0 405 52.8
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.1e-107 392.9 400 52.8
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 5.2e-107 392.1 400 52.8
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 8.9e-107 391.3 382 52.6
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 4.4e-106 389.0 402 51.5
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 5.8e-106 388.7 402 52.5
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 7.5e-106 388.3 400 51.8
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 1.3e-105 387.5 339 56.9
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 1.7e-105 387.1 401 51.6
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.1e-104 384.4 402 51.0
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 1.9e-104 383.6 410 51.7
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.2e-103 380.9 369 55.3
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 3.9e-102 375.9 394 51.3
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 6.6e-102 375.2 331 57.4
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.8e-100 369.8 322 58.1
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 5.2e-99 365.5 366 51.9
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 2.0e-98 363.6 400 49.8
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 5.8e-98 362.1 403 48.6
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 2.4e-96 356.7 401 49.1
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 4.1e-96 355.9 402 49.0
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 2.7e-95 353.2 405 49.4
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 3.5e-95 352.8 401 48.9
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 6.0e-95 352.1 403 48.6
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 7.8e-95 351.7 387 49.1
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 8.6e-94 348.2 397 48.6
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 2.5e-93 346.7 396 48.5
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 5.6e-93 345.5 402 47.8
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 1.2e-92 344.4 326 54.6
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.6e-92 344.0 402 47.8
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 7.1e-88 328.6 378 48.9
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 7.1e-88 328.6 378 48.9
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 1.6e-87 327.4 378 48.7
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 3.9e-86 322.8 257 61.1
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 6.6e-86 322.0 398 44.0
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 5.6e-85 318.9 273 58.2
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 6.2e-84 315.5 407 44.0
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.1e-83 314.7 361 48.5
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 2.2e-81 307.0 406 44.3
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 8.4e-81 305.1 440 42.3
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 3.2e-80 303.1 397 42.3
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.1e-77 294.7 237 62.4
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 3.6e-76 289.7 343 46.1
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.8e-75 287.3 342 47.4
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.4e-75 287.0 267 54.7
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.9e-72 277.3 262 54.2
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.9e-72 277.3 255 53.7
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.3e-70 271.2 278 51.4
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.9e-69 267.3 234 56.4
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.4e-67 261.2 268 51.9
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 2.2e-57 227.3 287 46.3
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 9.3e-56 221.9 369 39.0
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 6.7e-54 215.7 449 31.6
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 4.8e-52 209.5 163 59.5
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.5e-50 204.5 197 53.3
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 4.6e-39 166.4 369 33.3
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 4.3e-37 159.8 138 63.0
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 4.1e-35 153.3 462 28.6
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 7.7e-34 149.1 128 59.4
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 5.5e-32 142.9 318 29.9
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 7.2e-32 142.5 133 57.1
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 3.6e-31 140.2 128 60.2
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.6e-29 134.0 106 57.5
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 2.1e-23 114.4 227 33.9
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 2.7e-23 114.0 378 27.8
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 2.7e-23 114.0 227 33.5
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.4e-19 101.7 68 64.7
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.0e-18 97.8 127 47.2
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 1.9e-16 91.3 68 63.2
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 9.4e-16 89.0 116 47.4
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 7.5e-13 79.3 64 57.8
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.7e-10 70.9 69 56.5
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.2e-08 63.9 44 68.2


User provided reference genes

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