Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.2e-82 309.7 151 100.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 8.4e-47 190.7 150 62.0
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.4e-46 189.9 147 61.2
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.4e-46 189.9 151 58.3
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.9e-46 189.5 150 60.0
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 9.3e-46 187.2 151 58.3
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.6e-45 186.4 150 60.7
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.1e-45 186.0 147 61.9
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 4.6e-45 184.9 144 61.1
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 3.9e-44 181.8 148 58.8
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 5.1e-44 181.4 144 60.4
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 5.1e-44 181.4 144 58.3
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 6.7e-44 181.0 145 63.4
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 8.7e-44 180.6 150 58.0
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.1e-43 180.3 142 62.0
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-43 179.9 150 60.0
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.5e-43 179.9 147 58.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.5e-43 179.9 147 59.2
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 2.5e-43 179.1 144 60.4
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.3e-43 178.7 147 57.8
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.3e-43 178.3 147 57.8
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 4.3e-43 178.3 145 60.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 5.7e-43 177.9 144 56.9
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 9.6e-43 177.2 148 60.1
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.3e-42 176.8 147 59.2
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.8e-42 175.6 147 57.1
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.8e-42 175.6 144 56.2
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.8e-42 175.6 144 58.3
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 2.8e-42 175.6 147 55.1
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 3.7e-42 175.3 144 60.4
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 4.8e-42 174.9 142 61.3
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 4.8e-42 174.9 144 58.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 6.3e-42 174.5 147 55.8
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.4e-41 173.3 147 55.8
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 2.4e-41 172.6 148 55.4
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 3.1e-41 172.2 144 56.2
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 4.1e-41 171.8 147 55.1
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 5.3e-41 171.4 152 57.2
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 6.9e-41 171.0 148 56.8
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 6.9e-41 171.0 147 55.8
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.2e-40 170.2 147 55.8
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 2.0e-40 169.5 144 56.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.0e-40 169.5 147 55.1
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.4e-40 168.7 150 53.3
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 4.5e-40 168.3 147 54.4
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 5.9e-40 167.9 147 54.4
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 5.9e-40 167.9 148 56.1
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 7.6e-40 167.5 147 52.4
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.0e-39 167.2 149 55.0
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.7e-39 166.4 144 55.6
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 2.2e-39 166.0 148 53.4
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 2.2e-39 166.0 147 54.4
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.2e-39 166.0 147 52.4
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 2.2e-39 166.0 147 53.7
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.2e-39 166.0 147 54.4
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.9e-39 165.6 151 55.0
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 2.9e-39 165.6 150 52.7
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 3.8e-39 165.2 148 52.7
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 6.5e-39 164.5 150 55.3
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 6.5e-39 164.5 144 56.9
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 6.5e-39 164.5 151 55.0
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 8.5e-39 164.1 144 57.6
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 8.5e-39 164.1 147 53.7
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 8.5e-39 164.1 148 54.7
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 8.5e-39 164.1 151 55.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 8.5e-39 164.1 148 53.4
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.4e-38 163.3 144 53.5
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.9e-38 162.9 144 55.6
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.9e-38 162.9 147 57.1
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 3.2e-38 162.2 144 56.9
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 4.2e-38 161.8 148 52.7
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.2e-38 161.8 147 53.1
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 5.5e-38 161.4 147 53.1
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 7.2e-38 161.0 150 53.3
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.7e-37 159.1 147 52.4
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.7e-37 159.1 144 54.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 3.6e-37 158.7 150 52.7
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.3e-36 156.0 147 54.4
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 5.1e-36 154.8 147 54.4
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 4.3e-35 151.8 178 46.6
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 2.8e-34 149.1 153 51.0
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 8.2e-34 147.5 138 51.4
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 4.1e-33 145.2 151 51.7
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.3e-31 140.2 198 39.9
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.5e-27 126.7 151 45.0
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 2.0e-27 126.3 132 49.2
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 4.5e-24 115.2 109 50.5
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 7.7e-24 114.4 120 48.3
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 2.5e-22 109.4 134 41.0
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.6e-19 99.4 58 75.9
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 7.7e-16 87.8 109 42.2
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.2e-15 86.3 59 67.8
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.1e-14 84.0 66 59.1
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 5.5e-14 81.6 100 45.0
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 8.8e-12 74.3 60 58.3
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.6e-08 63.5 119 33.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 5.9e-08 61.6 122 33.6


User provided reference genes

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