Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G380 Amborella trichopoda HOM05D000098 ORTHO05D065660 2.2e-147 525.8 306 100.0
Cpa.g.sc8.246 Carica papaya HOM05D000098 ORTHO05D000523 5.7e-10 69.3 167 31.7
ClCG02G008380 Citrullus lanatus HOM05D000098 ORTHO05D000523 1.3e-09 68.2 85 43.5
CsaV3_2G035260 Cucumis sativus L. HOM05D000098 ORTHO05D000523 1.7e-09 67.8 70 48.6
CiPaw.03G163500 Carya illinoinensis HOM05D000098 ORTHO05D000523 2.2e-09 67.4 81 43.2
Lj8A122T62 Lonicera japonica HOM05D000098 ORTHO05D000523 2.2e-09 67.4 113 38.1
Lsat_1_v5_gn_8_129480 Lactuca sativa HOM05D000098 ORTHO05D000523 3.7e-09 66.6 80 47.5
MELO3C019227.2 Cucumis melo HOM05D000098 ORTHO05D000523 4.9e-09 66.2 84 42.9
Gohir.D13G063300 Gossypium hirsutum HOM05D000098 ORTHO05D000523 1.1e-08 65.1 86 40.7
Phvul.005G112600 Phaseolus vulgaris HOM05D000098 ORTHO05D000523 1.1e-08 65.1 76 44.7
TAR627G0832 Trochodendron aralioides HOM05D000098 ORTHO05D000523 1.1e-08 65.1 77 40.3
VMungo1080G0848 Vigna mungo HOM05D000098 ORTHO05D000523 1.8e-08 64.3 116 37.1
Glyma.12G196600 Glycine max HOM05D000098 ORTHO05D000523 2.4e-08 63.9 88 40.9
QL08p057218 Quercus lobata HOM05D000098 ORTHO05D000523 3.2e-08 63.5 117 36.8
Ca_01571_v3 Cicer arietinum L. HOM05D000098 ORTHO05D000523 5.4e-08 62.8 93 40.9
CiPaw.04G118500 Carya illinoinensis HOM05D000098 ORTHO05D000523 7.0e-08 62.4 68 39.7
COL.COLO4_13000 Corchorus olitorius HOM05D000098 ORTHO05D000523 7.0e-08 62.4 101 35.6
Sed0003778 Sechium edule HOM05D000098 ORTHO05D000523 7.0e-08 62.4 89 42.7
CSS0028576 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000523 9.2e-08 62.0 141 34.0
CANSAT64G1319 Cannabis sativa HOM05D000098 ORTHO05D000523 9.2e-08 62.0 109 35.8
DCAR_009693 Daucus carota HOM05D000310 ORTHO05D000523 9.2e-08 62.0 143 32.9
Glyma.13G305600 Glycine max HOM05D000098 ORTHO05D000523 9.2e-08 62.0 76 43.4
Gorai.013G071700 Gossypium raimondii HOM05D000098 ORTHO05D000523 9.2e-08 62.0 86 39.5
Gohir.A12G135000 Gossypium hirsutum HOM05D000098 ORTHO05D000523 1.2e-07 61.6 77 42.9
Gohir.A13G058700 Gossypium hirsutum HOM05D000098 ORTHO05D000523 1.2e-07 61.6 83 43.4
Gohir.D12G138700 Gossypium hirsutum HOM05D000098 ORTHO05D000523 1.2e-07 61.6 77 42.9
Gorai.008G150100 Gossypium raimondii HOM05D000098 ORTHO05D000523 1.2e-07 61.6 77 42.9
Lj3g0023198 Lotus japonicus HOM05D000098 ORTHO05D000523 1.2e-07 61.6 77 41.6
CSS0015388 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000523 1.6e-07 61.2 141 33.3
Sed0017353 Sechium edule HOM05D000098 ORTHO05D000523 1.6e-07 61.2 79 36.7
TWI36G0512 Tripterygium wilfordii HOM05D000098 ORTHO05D000523 1.6e-07 61.2 86 38.4
Actinidia24275 Actinidia chinensis HOM05D000098 ORTHO05D000523 2.0e-07 60.8 108 38.0
Dinv18537 Davidia involucrata HOM05D000098 ORTHO05D000523 2.0e-07 60.8 100 35.0
MD17G1091800 Malus domestica HOM05D000098 ORTHO05D000523 2.0e-07 60.8 78 42.3
Oeu019132.1 Olea europaea HOM05D000098 ORTHO05D000523 2.0e-07 60.8 119 34.5
QL08p033974 Quercus lobata HOM05D000098 ORTHO05D000523 2.0e-07 60.8 84 38.1
AT2G32300 Arabidopsis thaliana HOM05D000098 ORTHO05D000523 2.7e-07 60.5 73 47.9
Duzib052G1086 Durio zibethinus HOM05D000098 ORTHO05D000523 2.7e-07 60.5 68 41.2
Lsat_1_v5_gn_3_43320 Lactuca sativa HOM05D000098 ORTHO05D000523 2.7e-07 60.5 80 37.5
Prupe.3G221600 Prunus persica HOM05D000098 ORTHO05D000523 2.7e-07 60.5 78 43.6
Gohir.A04G107300 Gossypium hirsutum HOM05D000098 ORTHO05D000523 3.5e-07 60.1 75 40.0
Oeu000055.1 Olea europaea HOM05D000098 ORTHO05D000523 3.5e-07 60.1 70 41.4
Lj1P755T18 Lonicera japonica HOM05D000098 ORTHO05D000523 4.6e-07 59.7 72 38.9
Nn4g26516 Nelumbo nucifera HOM05D000098 ORTHO05D000523 4.6e-07 59.7 87 35.6
C04p61730 Brassica napus HOM05D000098 ORTHO05D000523 5.9e-07 59.3 106 36.8
BraA04t17997Z Brassica rapa HOM05D000098 ORTHO05D000523 5.9e-07 59.3 73 45.2
GSVIVG01030639001 Vitis vinifera HOM05D000098 ORTHO05D000523 5.9e-07 59.3 84 39.3
Manes.13G074200 Manihot esculenta HOM05D000098 ORTHO05D000523 1.0e-06 58.5 107 33.6
BcaC02g11333 Brassica carinata HOM05D000098 ORTHO05D000523 1.3e-06 58.2 103 37.9
C04p17310 Brassica napus HOM05D000098 ORTHO05D000523 1.3e-06 58.2 103 37.9
BolC4t23283H Brassica oleracea HOM05D000098 ORTHO05D000523 1.3e-06 58.2 103 37.9
Eucgr.A01733 Eucalyptus grandis HOM05D000098 ORTHO05D000523 1.3e-06 58.2 77 44.2
Dinv10911 Davidia involucrata HOM05D000098 ORTHO05D000523 1.7e-06 57.8 77 42.9
Actinidia18873 Actinidia chinensis HOM05D000098 ORTHO05D000523 2.3e-06 57.4 74 36.5
BcaB06g28587 Brassica carinata HOM05D000098 ORTHO05D000523 2.3e-06 57.4 73 43.8
A04p24800 Brassica napus HOM05D000098 ORTHO05D000523 2.3e-06 57.4 106 36.8
Cfa014448 Carpinus fangiana HOM05D000098 ORTHO05D000523 2.3e-06 57.4 79 39.2
Migut.E00994 Erythranthe guttata HOM05D000098 ORTHO05D001228 2.9e-06 57.0 68 38.2
Migut.E01139 Erythranthe guttata HOM05D000098 ORTHO05D001228 2.9e-06 57.0 68 38.2
Manes.05G055600 Manihot esculenta HOM05D000098 ORTHO05D000523 2.9e-06 57.0 75 42.7
PGR142G0187 Punica granatum HOM05D000098 ORTHO05D000523 2.9e-06 57.0 66 42.4
BcaC02g07939 Brassica carinata HOM05D000098 ORTHO05D000523 3.9e-06 56.6 103 36.9
Os01g0786500 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D000523 3.9e-06 56.6 66 45.5
QL04p029975 Quercus lobata HOM05D000098 ORTHO05D000523 3.9e-06 56.6 75 44.0
Sp4g14690 Schrenkiella parvula HOM05D000098 ORTHO05D000523 3.9e-06 56.6 65 44.6
Actinidia12493 Actinidia chinensis HOM05D000098 ORTHO05D000523 5.0e-06 56.2 77 39.0
AL4G27700 Arabidopsis lyrata HOM05D000098 ORTHO05D000523 5.0e-06 56.2 73 45.2
Hma1.2p1_0613F.1_g189330 Hydrangea macrophylla HOM05D000098 ORTHO05D000523 5.0e-06 56.2 79 38.0
Medtr2g088990 Medicago truncatula HOM05D000098 ORTHO05D000523 5.0e-06 56.2 111 34.2
Carub.0004s1366 Capsella rubella HOM05D000098 ORTHO05D000523 6.6e-06 55.8 106 35.8
Cfa014446 Carpinus fangiana HOM05D000098 ORTHO05D000523 6.6e-06 55.8 79 38.0
ClCG05G000150 Citrullus lanatus HOM05D000098 ORTHO05D000523 6.6e-06 55.8 71 43.7
MBI02_g29697_MAGBIO Magnolia biondii HOM05D000098 ORTHO05D000523 6.6e-06 55.8 85 32.9
Rhsim06G0156900 Rhododendron simsii HOM05D000098 ORTHO05D000523 6.6e-06 55.8 94 39.4
Thecc.02G162900 Theobroma cacao HOM05D000098 ORTHO05D000523 6.6e-06 55.8 77 39.0
BolC4t27656H Brassica oleracea HOM05D000098 ORTHO05D000523 8.6e-06 55.5 103 35.9
Migut.O00407 Erythranthe guttata HOM05D000098 ORTHO05D001228 8.6e-06 55.5 74 36.5
Lalb_Chr24g0393031 Lupinus albus HOM05D000098 ORTHO05D000523 8.6e-06 55.5 131 33.6
unitig_0.g1344 Utricularia gibba HOM05D000098 ORTHO05D000523 8.6e-06 55.5 77 39.0


User provided reference genes

Program Settings