Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 5.9e-143 510.8 242 100.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.6e-92 343.2 243 67.5
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.0e-91 338.6 239 69.0
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 8.9e-91 337.4 243 67.1
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 8.9e-91 337.4 243 65.4
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 2.0e-90 336.3 243 66.7
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 2.6e-90 335.9 247 68.4
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 5.8e-90 334.7 249 65.5
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 5.8e-90 334.7 243 66.7
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 7.6e-90 334.3 244 66.8
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 7.6e-90 334.3 243 66.7
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 9.9e-90 334.0 255 65.1
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.8e-89 332.0 247 64.4
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 3.8e-89 332.0 248 65.3
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.4e-88 330.1 244 66.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.2e-88 328.9 249 64.3
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 4.2e-88 328.6 242 64.9
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 5.4e-88 328.2 246 64.6
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.2e-87 327.0 241 66.0
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.6e-87 326.6 248 65.3
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 3.5e-87 325.5 245 62.4
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 4.6e-87 325.1 248 64.9
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 4.6e-87 325.1 243 65.0
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 7.8e-87 324.3 247 61.5
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.0e-86 323.9 248 63.7
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.3e-86 323.6 249 62.2
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 2.3e-86 322.8 247 65.2
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 3.9e-86 322.0 246 64.2
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 6.6e-86 321.2 243 63.0
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 6.6e-86 321.2 245 63.3
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 8.7e-86 320.9 247 64.0
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.1e-85 320.5 248 62.1
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.5e-85 320.1 246 63.4
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 1.5e-85 320.1 247 64.0
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.9e-85 319.7 253 61.3
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.5e-85 319.3 248 62.1
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 3.3e-85 318.9 246 61.8
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 3.3e-85 318.9 242 62.8
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 7.3e-85 317.8 240 62.9
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 9.6e-85 317.4 244 61.1
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 1.3e-84 317.0 282 57.1
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.6e-84 316.6 241 66.0
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.6e-84 316.6 244 62.3
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.6e-84 316.6 248 62.9
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 3.6e-84 315.5 241 64.3
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 4.8e-84 315.1 245 64.5
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 4.8e-84 315.1 252 60.7
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 8.1e-84 314.3 239 62.3
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 8.1e-84 314.3 239 63.2
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 8.1e-84 314.3 242 63.6
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.4e-83 313.5 245 61.6
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.8e-83 313.2 244 63.1
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 2.4e-83 312.8 247 61.5
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.4e-83 312.8 244 62.3
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 2.4e-83 312.8 240 62.5
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 4.0e-83 312.0 219 65.3
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 5.3e-83 311.6 245 60.8
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.2e-82 310.5 246 61.4
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 1.5e-82 310.1 245 61.6
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.6e-82 309.3 242 61.6
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 4.4e-82 308.5 239 60.7
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 7.6e-82 307.8 246 61.0
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 9.9e-82 307.4 241 60.2
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.7e-81 306.6 245 62.4
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 2.2e-81 306.2 245 60.8
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 2.2e-81 306.2 245 60.4
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.4e-80 303.5 233 63.9
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 3.2e-80 302.4 256 57.8
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.1e-80 301.2 238 60.1
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 2.7e-79 299.3 244 60.7
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.3e-78 297.0 246 58.5
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.3e-78 296.2 238 60.5
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 1.5e-77 293.5 205 66.3
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 5.6e-77 291.6 305 49.5
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 1.3e-76 290.4 252 59.1
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.2e-76 288.1 248 58.1
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.5e-74 283.5 252 58.3
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.1e-72 277.3 242 57.4
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.4e-72 276.9 280 50.4
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 5.4e-72 275.0 299 48.2
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 2.7e-71 272.7 254 58.3
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.5e-69 266.9 264 51.5
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 9.6e-69 264.2 272 51.5
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.8e-68 262.7 182 69.2
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.1e-67 260.8 180 70.6
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 5.3e-67 258.5 268 52.2
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 6.9e-67 258.1 177 69.5
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 2.0e-66 256.5 248 54.4
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.9e-64 250.0 189 62.4
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 2.5e-64 249.6 209 59.8
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.6e-63 246.9 212 58.5
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 2.1e-63 246.5 176 66.5
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.3e-61 239.2 284 47.9
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 4.1e-59 232.3 256 50.0
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.1e-56 224.2 247 51.8
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 3.3e-53 212.6 252 47.2
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 1.3e-52 210.7 286 43.7
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 4.3e-45 185.7 189 52.4
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 4.8e-44 182.2 135 60.7
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.2e-42 177.6 137 62.0
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 1.1e-37 161.0 116 66.4
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 2.7e-23 113.2 88 60.2
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 8.0e-23 111.7 93 58.1
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 3.7e-20 102.8 86 55.8
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 2.7e-10 70.1 39 69.2
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 1.2e-07 61.2 240 25.8
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 3.6e-07 59.7 180 31.7
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 1.0e-06 58.2 178 29.8
vmacro17831 Vaccinium macrocarpon HOM05D005677 ORTHO05D006966 1.8e-06 57.4 180 27.8
BcaC09g50274 Brassica carinata HOM05D005677 ORTHO05D006966 2.3e-06 57.0 216 26.9
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 4.0e-06 56.2 182 29.7
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 4.0e-06 56.2 137 27.7
BcaC09g50280 Brassica carinata HOM05D005677 ORTHO05D006966 5.2e-06 55.8 158 29.7
C01p27040 Brassica napus HOM05D005677 ORTHO05D006966 5.2e-06 55.8 158 29.7
BolC1t02652H Brassica oleracea HOM05D005677 ORTHO05D006966 5.2e-06 55.8 158 29.7
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 5.2e-06 55.8 118 28.8
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 5.2e-06 55.8 124 29.8


User provided reference genes

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