Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 3.6e-251 871.3 510 100.0
ATR0618G193 Amborella trichopoda HOM05D007068 ORTHO05D008590 3.6e-65 253.4 123 98.4
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 3.4e-39 167.2 198 50.0
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 2.9e-38 164.1 212 45.3
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 4.9e-38 163.3 379 35.6
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 4.1e-37 160.2 358 34.1
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 9.2e-37 159.1 217 46.5
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 1.3e-35 155.2 181 48.6
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.7e-35 154.8 380 34.2
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 3.9e-35 153.7 375 32.5
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 6.6e-35 152.9 232 41.8
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 8.6e-35 152.5 335 36.1
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 8.6e-35 152.5 354 33.6
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.1e-32 145.6 248 39.1
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 8.9e-32 142.5 192 44.8
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 2.0e-31 141.4 214 43.9
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 3.4e-31 140.6 165 47.9
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 5.8e-31 139.8 201 41.3
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 7.5e-31 139.4 352 34.4
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 9.8e-31 139.0 195 40.5
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 1.7e-30 138.3 376 33.2
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.7e-30 138.3 352 34.1
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 2.2e-30 137.9 336 31.2
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 2.2e-30 137.9 223 40.8
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 4.9e-30 136.7 353 33.1
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 4.9e-30 136.7 189 43.9
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 6.4e-30 136.3 369 33.3
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 8.3e-30 136.0 187 46.0
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.1e-29 135.6 190 42.6
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 2.4e-29 134.4 368 32.9
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 2.4e-29 134.4 216 38.9
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 4.1e-29 133.7 183 44.8
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 4.1e-29 133.7 218 39.0
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 9.2e-29 132.5 344 33.7
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 9.2e-29 132.5 217 41.5
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.7e-28 131.0 356 32.6
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 6.0e-28 129.8 377 29.2
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 7.8e-28 129.4 192 40.6
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 1.3e-27 128.6 171 43.9
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.3e-27 128.6 260 35.4
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.3e-27 128.6 178 41.6
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 2.3e-27 127.9 193 43.0
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 3.0e-27 127.5 176 43.8
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 3.9e-27 127.1 184 43.5
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 3.9e-27 127.1 198 39.4
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 5.1e-27 126.7 177 42.4
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 6.6e-27 126.3 348 31.6
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 1.1e-26 125.6 347 29.1
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.1e-26 125.6 339 33.0
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.9e-26 124.8 181 43.6
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 3.3e-26 124.0 360 30.0
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 5.6e-26 123.2 293 33.1
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 7.3e-26 122.9 362 32.3
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 1.6e-25 121.7 314 32.8
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 1.6e-25 121.7 197 41.1
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 1.6e-25 121.7 169 44.4
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 2.1e-25 121.3 139 45.3
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 2.1e-25 121.3 177 40.1
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 2.8e-25 120.9 139 46.8
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.6e-25 120.6 178 42.7
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 6.2e-25 119.8 212 38.2
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 8.1e-25 119.4 218 36.7
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 8.1e-25 119.4 218 36.7
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.1e-24 119.0 177 40.7
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 1.8e-24 118.2 270 33.7
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 3.1e-24 117.5 171 40.9
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 5.2e-24 116.7 178 41.0
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 1.5e-23 115.2 314 29.6
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 2.0e-23 114.8 176 39.8
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 3.4e-23 114.0 140 42.9
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 3.4e-23 114.0 140 42.9
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 4.4e-23 113.6 206 36.4
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 5.8e-23 113.2 156 41.7
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 7.5e-23 112.8 133 43.6
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 9.9e-23 112.5 255 31.0
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 1.3e-22 112.1 210 36.2
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.7e-22 111.7 376 29.3
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 1.7e-22 111.7 170 40.6
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.9e-22 110.2 219 36.5
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 1.4e-21 108.6 193 35.8
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 2.4e-21 107.8 285 30.2
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 4.1e-21 107.1 90 58.9
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 5.4e-21 106.7 136 44.9
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 5.4e-21 106.7 205 35.1
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 9.2e-21 105.9 130 43.8
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 9.2e-21 105.9 85 62.4
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 1.2e-20 105.5 124 46.8
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 6.0e-20 103.2 177 36.2
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 1.0e-19 102.4 336 28.9
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 5.1e-19 100.1 170 37.6
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 5.1e-19 100.1 170 37.6
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 7.3e-18 96.3 338 29.9
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 1.2e-17 95.5 128 40.6
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 1.2e-17 95.5 144 38.9
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 8.1e-17 92.8 147 40.8
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 1.4e-16 92.0 143 38.5
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 1.8e-16 91.7 264 31.1
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 9.9e-15 85.9 352 27.0
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.6e-12 78.6 82 51.2
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 5.1e-11 73.6 198 31.3
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 2.1e-09 68.2 66 45.5
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 4.8e-09 67.0 213 27.7
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 1.4e-08 65.5 146 31.5
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.8e-08 65.1 56 55.4
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 5.3e-08 63.5 116 37.1
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 4.4e-07 60.5 92 37.0
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 2.2e-06 58.2 102 38.2


User provided reference genes

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