Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 6.9e-205 718.4 890 100.0
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 7.7e-39 166.8 886 65.7
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 1.2e-36 159.5 886 64.2
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 1.2e-36 159.5 882 69.6
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 2.1e-36 158.7 396 58.3
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 1.4e-32 146.0 403 58.3
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 2.6e-31 141.7 393 68.7
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 2.9e-30 138.3 392 68.1
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 8.5e-30 136.7 392 68.1
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 1.1e-29 136.3 395 55.9
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 2.5e-29 135.2 398 57.0
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 5.5e-29 134.0 391 57.3
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 1.2e-28 132.9 395 55.7
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 3.6e-28 131.3 392 56.1
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 3.6e-28 131.3 392 67.3
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 6.1e-28 130.6 396 55.6
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 8.0e-28 130.2 392 56.4
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 1.0e-27 129.8 398 55.8
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 5.2e-27 127.5 393 53.7
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 5.2e-27 127.5 389 64.5
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 6.7e-27 127.1 394 33.2
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 8.8e-27 126.7 396 55.3
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 1.5e-26 125.9 396 53.0
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 2.0e-26 125.6 396 55.1
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 4.4e-26 124.4 396 55.3
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 5.7e-26 124.0 398 55.3
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 7.5e-26 123.6 396 52.5
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 1.3e-25 122.9 376 56.4
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 2.2e-25 122.1 393 54.7
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 2.8e-25 121.7 393 55.7
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 8.3e-25 120.2 396 54.3
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 8.3e-25 120.2 395 52.7
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.1e-24 119.8 398 56.3
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 1.1e-24 119.8 392 65.8
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 1.4e-24 119.4 397 55.2
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 1.4e-24 119.4 393 60.6
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 1.4e-24 119.4 390 55.9
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 2.4e-24 118.6 395 56.5
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 2.4e-24 118.6 395 56.5
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 2.4e-24 118.6 395 56.5
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 7.0e-24 117.1 395 52.9
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 9.1e-24 116.7 395 58.5
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 9.1e-24 116.7 392 54.6
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 1.6e-23 115.9 395 54.4
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 2.0e-23 115.5 389 55.3
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 5.9e-23 114.0 393 53.9
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 7.7e-23 113.6 394 53.6
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 1.7e-22 112.5 394 51.8
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 2.2e-22 112.1 395 54.2
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 2.9e-22 111.7 395 52.4
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 2.9e-22 111.7 397 53.4
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 3.8e-22 111.3 391 52.9
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 3.8e-22 111.3 396 50.8
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.5e-21 109.4 206 36.4
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 1.9e-21 109.0 398 64.8
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 2.5e-21 108.6 400 64.0
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 4.2e-21 107.8 393 53.2
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 4.2e-21 107.8 388 56.4
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 5.5e-21 107.5 393 53.2
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 5.5e-21 107.5 391 53.2
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 7.2e-21 107.1 400 53.0
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 7.2e-21 107.1 393 54.5
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 1.6e-20 105.9 392 64.8
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 8.0e-20 103.6 397 52.6
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 1.4e-19 102.8 391 52.4
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 1.4e-19 102.8 400 51.5
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 3.0e-19 101.7 393 53.9
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 4.0e-19 101.3 393 53.4
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 1.2e-18 99.8 397 51.9
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 2.6e-18 98.6 396 51.3
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 9.8e-18 96.7 378 52.6
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 1.3e-17 96.3 400 51.0
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 2.8e-17 95.1 378 53.2
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 3.7e-17 94.7 378 52.9
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 6.3e-17 94.0 66 63.6
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 8.3e-17 93.6 64 67.2
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 8.3e-17 93.6 378 54.2
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 3.1e-16 91.7 397 51.6
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 5.4e-16 90.9 208 28.8
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 7.0e-16 90.5 381 52.0
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 7.0e-16 90.5 391 59.6
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 2.0e-15 89.0 64 62.5
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 2.7e-15 88.6 374 53.5
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 4.5e-15 87.8 390 53.3
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 1.7e-14 85.9 393 51.9
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 1.7e-14 85.9 393 51.9
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 2.9e-14 85.1 446 42.4
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 8.6e-14 83.6 422 39.6
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 1.9e-13 82.4 127 40.2
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 3.3e-13 81.6 376 52.9
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 3.6e-12 78.2 65 52.3
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 4.7e-12 77.8 206 27.7
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 4.7e-12 77.8 238 71.8
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.4e-11 76.3 61 55.7
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.4e-11 76.3 61 55.7
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 5.2e-11 74.3 392 48.7
SEGI_20674 Sequoiadendron giganteum HOM05D007101 ORTHO05D008632 1.1e-08 66.6 73 47.9
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 1.4e-08 66.2 203 27.1
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 1.4e-08 66.2 239 72.4
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.2e-07 63.2 143 33.6
Gohir.D06G112750 Gossypium hirsutum HOM05D007101 ORTHO05D019476 1.0e-06 60.1 67 44.8
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 5.0e-06 57.8 54 50.0


User provided reference genes

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